Incidental Mutation 'R6934:Vmn2r-ps117'
ID 540223
Institutional Source Beutler Lab
Gene Symbol Vmn2r-ps117
Ensembl Gene ENSMUSG00000093531
Gene Name vomeronasal 2, receptor, pseudogene 117
Synonyms EG665303
MMRRC Submission 045049-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.168) question?
Stock # R6934 (G1)
Quality Score 225.009
Status Not validated
Chromosome 17
Chromosomal Location 19042822-19059004 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to G at 19044967 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Stop codon at position 461 (Y461*)
Ref Sequence ENSEMBL: ENSMUSP00000156026 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000176899]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000176899
AA Change: Y461*
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.3%
  • 20x: 97.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700018B08Rik T A 8: 122,266,712 (GRCm39) Y58F probably benign Het
Asap2 T C 12: 21,218,251 (GRCm39) V58A probably damaging Het
Bccip A G 7: 133,322,520 (GRCm39) M289V probably benign Het
Bhmt2 A T 13: 93,798,819 (GRCm39) I334N probably benign Het
Copa T A 1: 171,938,253 (GRCm39) I513N possibly damaging Het
Cspg4b T C 13: 113,505,800 (GRCm39) S2310P probably benign Het
Ctif G A 18: 75,568,431 (GRCm39) T569M probably benign Het
Dennd1a A T 2: 37,691,225 (GRCm39) M231K possibly damaging Het
Dnah3 A G 7: 119,653,824 (GRCm39) probably null Het
Fat3 T C 9: 16,288,252 (GRCm39) I424V probably damaging Het
Foxred2 G T 15: 77,836,530 (GRCm39) C328* probably null Het
Gemin5 A T 11: 58,038,738 (GRCm39) H590Q probably damaging Het
Gm5475 T C 15: 100,325,007 (GRCm39) probably benign Het
Gmip A G 8: 70,273,576 (GRCm39) T956A probably benign Het
Hmbox1 A T 14: 65,134,281 (GRCm39) D106E probably benign Het
Irs2 A T 8: 11,054,697 (GRCm39) I1245N probably damaging Het
Kcnk1 A G 8: 126,752,129 (GRCm39) Y245C probably damaging Het
Krtap4-9 A T 11: 99,676,708 (GRCm39) R210* probably null Het
Lama1 A G 17: 68,081,538 (GRCm39) D1325G probably benign Het
Lyz3 C T 10: 117,074,413 (GRCm39) D25N probably benign Het
Mep1a A T 17: 43,793,121 (GRCm39) V361E probably damaging Het
Mrgprx2 A G 7: 48,131,813 (GRCm39) I92T possibly damaging Het
Nup214 A T 2: 31,872,683 (GRCm39) R242* probably null Het
Nynrin T G 14: 56,101,335 (GRCm39) S335A probably benign Het
Or13a24 T G 7: 140,154,564 (GRCm39) L166R probably damaging Het
Or5p60 A G 7: 107,724,026 (GRCm39) V148A probably benign Het
Or8b1c T G 9: 38,384,472 (GRCm39) I143S probably benign Het
Orc2 T C 1: 58,539,523 (GRCm39) K39E probably benign Het
Ppl C T 16: 4,912,373 (GRCm39) G736D probably benign Het
Ppp2r1a A G 17: 21,181,895 (GRCm39) E471G possibly damaging Het
Prrc2c G A 1: 162,548,074 (GRCm39) P161S probably benign Het
Rnf213 A G 11: 119,310,893 (GRCm39) I804V probably benign Het
Saal1 A G 7: 46,352,088 (GRCm39) C144R probably benign Het
Slc29a4 G A 5: 142,698,713 (GRCm39) V125I probably benign Het
Smarcc2 A G 10: 128,305,541 (GRCm39) T322A probably benign Het
Srgap2 A T 1: 131,244,969 (GRCm39) M591K possibly damaging Het
Stard9 A G 2: 120,528,176 (GRCm39) I1478V probably benign Het
Tet2 A G 3: 133,188,998 (GRCm39) probably null Het
Tmem150c C T 5: 100,243,465 (GRCm39) probably null Het
Tmem39b T A 4: 129,572,366 (GRCm39) H412L possibly damaging Het
Tox A C 4: 6,697,635 (GRCm39) H389Q probably damaging Het
Trank1 T C 9: 111,202,158 (GRCm39) I1595T probably damaging Het
Vps13a T C 19: 16,653,558 (GRCm39) H1941R probably damaging Het
Other mutations in Vmn2r-ps117
AlleleSourceChrCoordTypePredicted EffectPPH Score
R6903:Vmn2r-ps117 UTSW 17 19,058,552 (GRCm39) missense possibly damaging 0.94
R6912:Vmn2r-ps117 UTSW 17 19,047,464 (GRCm39) missense probably damaging 1.00
R6953:Vmn2r-ps117 UTSW 17 19,045,095 (GRCm39) missense probably benign
R6974:Vmn2r-ps117 UTSW 17 19,058,495 (GRCm39) missense probably benign 0.15
R7373:Vmn2r-ps117 UTSW 17 19,044,948 (GRCm39) missense probably benign
R7630:Vmn2r-ps117 UTSW 17 19,044,909 (GRCm39) missense probably benign 0.01
R7776:Vmn2r-ps117 UTSW 17 19,043,934 (GRCm39) missense probably damaging 0.96
R8060:Vmn2r-ps117 UTSW 17 19,058,124 (GRCm39) missense possibly damaging 0.85
R8126:Vmn2r-ps117 UTSW 17 19,042,814 (GRCm39) missense probably benign 0.00
R8751:Vmn2r-ps117 UTSW 17 19,044,021 (GRCm39) missense probably benign
R8986:Vmn2r-ps117 UTSW 17 19,044,943 (GRCm39) nonsense probably null
R9324:Vmn2r-ps117 UTSW 17 19,042,911 (GRCm39) missense probably benign 0.20
R9417:Vmn2r-ps117 UTSW 17 19,044,037 (GRCm39) nonsense probably null
R9607:Vmn2r-ps117 UTSW 17 19,043,940 (GRCm39) missense probably benign 0.03
Z1177:Vmn2r-ps117 UTSW 17 19,058,338 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- GTACAGTCAGGTTTTCACTAAGTCATC -3'
(R):5'- CTCCAAGTGTAATGGAACTTGAG -3'

Sequencing Primer
(F):5'- TGTTGATGTTCACAACAGA -3'
(R):5'- GCTGGCCATTGTATCATCT -3'
Posted On 2018-11-06