Mutagenetix > Incidental Mutation

Incidental Mutation 'R6925:Zfp979'

541070

Institutional Source

Beutler Lab

Gene Symbol

Zfp979

Ensembl Gene

ENSMUSG00000066000

Gene Name

zinc finger protein 979

Synonyms

Ssm1, 2610305D13Rik

MMRRC Submission

045043-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.226) question?

Stock #

R6925 (G1)

Quality Score

97.0078

Status

Validated

Chromosome

Chromosomal Location

147696394-147726970 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 147697999 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Serine at position 237 (C237S)

Ref Sequence

ENSEMBL: ENSMUSP00000101345 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037565] [ENSMUST00000105720] [ENSMUST00000133006]

AlphaFold

A2A799

Predicted Effect

possibly damaging
Transcript: ENSMUST00000037565
AA Change: C237S

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000038153
Gene: ENSMUSG00000066000
AA Change: C237S

Domain	Start	End	E-Value	Type
KRAB	28	88	2.06e-16	SMART
ZnF_C2H2	257	279	2.06e1	SMART
ZnF_C2H2	285	307	2.53e-2	SMART
ZnF_C2H2	313	335	1.95e-3	SMART
ZnF_C2H2	341	363	1.4e1	SMART
ZnF_C2H2	369	391	9.08e-4	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000105720
AA Change: C237S

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000101345
Gene: ENSMUSG00000066000
AA Change: C237S

Domain	Start	End	E-Value	Type
KRAB	28	88	2.06e-16	SMART
ZnF_C2H2	257	279	2.06e1	SMART
ZnF_C2H2	285	307	2.53e-2	SMART
ZnF_C2H2	313	335	1.95e-3	SMART
ZnF_C2H2	341	363	1.4e1	SMART
ZnF_C2H2	369	391	9.08e-4	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000133006

SMART Domains

Protein: ENSMUSP00000114677
Gene: ENSMUSG00000066000

Domain	Start	End	E-Value	Type
KRAB	28	88	2.06e-16	SMART

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 98.0%

Validation Efficiency

100% (91/91)

Allele List at MGI

Other mutations in this stock

Total: 90 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acat1	A	T	9: 53,503,329 (GRCm39)	V170E	probably benign	Het
Atp2b2	T	A	6: 113,737,681 (GRCm39)	I902F	probably damaging	Het
Cacna1d	A	G	14: 29,773,594 (GRCm39)	V1697A	probably benign	Het
Ccdc14	T	A	16: 34,511,119 (GRCm39)	F31Y	probably benign	Het
Ccdc17	T	A	4: 116,455,407 (GRCm39)	V250E	probably damaging	Het
Cct7	A	G	6: 85,436,164 (GRCm39)	N25S	probably damaging	Het
Cdcp3	A	G	7: 130,824,436 (GRCm39)	Q177R	possibly damaging	Het
Cep19	G	C	16: 31,922,760 (GRCm39)	G9R	probably damaging	Het
Ces5a	A	T	8: 94,249,685 (GRCm39)		probably null	Het
Chd1l	T	G	3: 97,490,142 (GRCm39)	E471A	probably damaging	Het
Chd6	A	G	2: 160,855,047 (GRCm39)	I787T	probably damaging	Het
Cntnap5c	A	C	17: 58,702,261 (GRCm39)	T1194P	probably benign	Het
Col6a3	T	A	1: 90,743,724 (GRCm39)	M208L	probably benign	Het
Coro7	A	T	16: 4,446,538 (GRCm39)		probably null	Het
Csrnp2	T	C	15: 100,379,839 (GRCm39)	K484R	probably benign	Het
Cyp2c39	T	A	19: 39,501,639 (GRCm39)	V64E	probably damaging	Het
Ddr2	T	C	1: 169,825,701 (GRCm39)	K300E	probably benign	Het
Ddx56	T	C	11: 6,213,980 (GRCm39)	E393G	probably damaging	Het
Diaph1	A	C	18: 37,986,732 (GRCm39)	Y1084*	probably null	Het
Disp1	A	T	1: 182,868,042 (GRCm39)	F1459L	probably benign	Het
Dnajc8	G	A	4: 132,271,424 (GRCm39)	A80T	probably damaging	Het
Elfn1	T	A	5: 139,957,440 (GRCm39)	M148K	probably benign	Het
Emcn	T	A	3: 137,124,763 (GRCm39)	I154N	probably damaging	Het
Enah	T	A	1: 181,733,464 (GRCm39)		probably null	Het
Enah	C	G	1: 181,733,463 (GRCm39)		probably null	Het
Ep300	C	A	15: 81,534,182 (GRCm39)	Q2080K	probably benign	Het
Epha2	T	A	4: 141,036,068 (GRCm39)	M168K	probably benign	Het
Ercc6	T	A	14: 32,284,565 (GRCm39)	I776N	probably damaging	Het
Fan1	T	A	7: 64,022,234 (GRCm39)	N340Y	probably damaging	Het
Fat4	G	T	3: 39,050,353 (GRCm39)		probably null	Het
G3bp1	A	G	11: 55,388,786 (GRCm39)	R333G	possibly damaging	Het
Gm3604	A	G	13: 62,517,204 (GRCm39)	F385L	probably benign	Het
Gm5800	T	C	14: 51,951,157 (GRCm39)	I147M	possibly damaging	Het
Hipk1	A	G	3: 103,685,561 (GRCm39)	F18S	unknown	Het
Ighv3-8	A	T	12: 114,285,950 (GRCm39)	C131S	probably benign	Het
Il23r	T	G	6: 67,400,477 (GRCm39)	T618P	probably damaging	Het
Il31ra	G	A	13: 112,664,063 (GRCm39)	T538I	possibly damaging	Het
Kcns2	A	G	15: 34,840,059 (GRCm39)	D474G	unknown	Het
Klc4	T	C	17: 46,947,155 (GRCm39)	T407A	possibly damaging	Het
Klra5	C	T	6: 129,888,420 (GRCm39)	S2N	probably benign	Het
Krt10	T	C	11: 99,279,677 (GRCm39)	Y161C	probably damaging	Het
Kxd1	A	T	8: 70,975,928 (GRCm39)	M1K	probably null	Het
Lgals1	A	C	15: 78,812,240 (GRCm39)	D27A	possibly damaging	Het
Lgr5	T	C	10: 115,302,251 (GRCm39)	S308G	probably benign	Het
Lrp1	G	A	10: 127,392,857 (GRCm39)	S2736L	probably benign	Het
Lrpap1	G	T	5: 35,259,880 (GRCm39)	H73N	probably benign	Het
Mcpt1	C	A	14: 56,256,522 (GRCm39)	T86K	probably damaging	Het
Megf6	A	T	4: 154,339,044 (GRCm39)	D527V	probably damaging	Het
Mical3	A	T	6: 120,936,351 (GRCm39)	S1392T	probably benign	Het
Mmp2	A	T	8: 93,566,010 (GRCm39)	D437V	probably damaging	Het
Mob4	T	A	1: 55,191,881 (GRCm39)	Y166*	probably null	Het
Mrap2	G	A	9: 87,064,527 (GRCm39)	M89I	possibly damaging	Het
Mug1	G	A	6: 121,858,746 (GRCm39)	A1155T	probably damaging	Het
Myh2	G	T	11: 67,084,044 (GRCm39)	A1556S	probably benign	Het
Nfatc3	A	G	8: 106,845,954 (GRCm39)	D1028G	probably benign	Het
Ngef	T	G	1: 87,430,985 (GRCm39)		probably null	Het
Nlrp1a	A	T	11: 70,983,339 (GRCm39)	L1209Q	probably null	Het
Npr2	C	T	4: 43,647,553 (GRCm39)	R819C	probably damaging	Het
Nsd2	A	T	5: 34,036,454 (GRCm39)	D646V	probably damaging	Het
Nsun7	A	G	5: 66,434,415 (GRCm39)	H252R	probably damaging	Het
Or2a25	T	A	6: 42,888,791 (GRCm39)	C111*	probably null	Het
Or2k2	A	T	4: 58,785,647 (GRCm39)	I25N	possibly damaging	Het
Or51a10	C	T	7: 103,698,947 (GRCm39)	V205I	probably benign	Het
Or8g32	A	T	9: 39,305,156 (GRCm39)	Q20L	probably benign	Het
Or8g32	G	T	9: 39,305,157 (GRCm39)	Q20H	probably benign	Het
Pcdhga2	A	T	18: 37,803,638 (GRCm39)	D494V	probably damaging	Het
Pcsk2	A	G	2: 143,655,667 (GRCm39)	E617G	probably damaging	Het
Pdc	T	C	1: 150,208,931 (GRCm39)	I138T	probably damaging	Het
Phc2	T	A	4: 128,641,927 (GRCm39)	S750T	probably damaging	Het
Pkd2l1	T	A	19: 44,179,947 (GRCm39)	N88Y	possibly damaging	Het
Plcl1	C	T	1: 55,445,757 (GRCm39)	R71*	probably null	Het
Prag1	C	A	8: 36,571,048 (GRCm39)	L544M	probably damaging	Het
Prkg2	A	G	5: 99,114,369 (GRCm39)		probably null	Het
Psd2	G	A	18: 36,112,764 (GRCm39)	S153N	probably damaging	Het
Rab11fip1	A	T	8: 27,643,000 (GRCm39)	S600T	probably damaging	Het
Rbms1	T	G	2: 60,592,648 (GRCm39)	T222P	probably benign	Het
Slfn8	A	T	11: 82,904,243 (GRCm39)	Y382*	probably null	Het
Socs4	T	A	14: 47,527,195 (GRCm39)	C43*	probably null	Het
Sorl1	T	A	9: 41,944,922 (GRCm39)	T868S	probably damaging	Het
St6gal1	A	G	16: 23,174,963 (GRCm39)	Y267C	probably damaging	Het
Syne1	A	G	10: 5,076,682 (GRCm39)	V6879A	probably benign	Het
Syne2	C	A	12: 75,900,906 (GRCm39)	H22N	possibly damaging	Het
Tmeff2	T	A	1: 50,967,180 (GRCm39)	L25Q	probably damaging	Het
Tmprss11g	G	T	5: 86,635,285 (GRCm39)	D396E	probably benign	Het
Tmprss11g	T	A	5: 86,635,295 (GRCm39)	H393L	probably benign	Het
Vmn2r23	A	G	6: 123,681,512 (GRCm39)	E140G	probably damaging	Het
Wapl	T	C	14: 34,399,320 (GRCm39)	S130P	probably benign	Het
Zeb2	T	A	2: 44,884,541 (GRCm39)	K982M	probably damaging	Het
Zfhx3	C	G	8: 109,683,453 (GRCm39)	H3631D	unknown	Het
Zfp719	T	C	7: 43,240,130 (GRCm39)	S573P	probably damaging	Het

Other mutations in Zfp979

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01285:Zfp979	APN	4	147,699,853 (GRCm39)	missense	probably damaging	0.98
IGL01865:Zfp979	APN	4	147,699,774 (GRCm39)	missense	probably benign	0.03
IGL02336:Zfp979	APN	4	147,699,808 (GRCm39)	missense	probably damaging	1.00
R0336:Zfp979	UTSW	4	147,697,592 (GRCm39)	missense	possibly damaging	0.86
R1365:Zfp979	UTSW	4	147,697,681 (GRCm39)	missense	probably benign	0.00
R1440:Zfp979	UTSW	4	147,698,493 (GRCm39)	missense	possibly damaging	0.96
R1714:Zfp979	UTSW	4	147,698,442 (GRCm39)	missense	probably damaging	1.00
R1796:Zfp979	UTSW	4	147,697,740 (GRCm39)	missense	probably damaging	0.99
R2155:Zfp979	UTSW	4	147,697,915 (GRCm39)	missense	possibly damaging	0.86
R3735:Zfp979	UTSW	4	147,697,939 (GRCm39)	missense	possibly damaging	0.93
R3963:Zfp979	UTSW	4	147,697,588 (GRCm39)	missense	probably benign	0.34
R3972:Zfp979	UTSW	4	147,702,876 (GRCm39)	nonsense	probably null
R4471:Zfp979	UTSW	4	147,697,913 (GRCm39)	nonsense	probably null
R4983:Zfp979	UTSW	4	147,698,371 (GRCm39)	missense	possibly damaging	0.94
R5310:Zfp979	UTSW	4	147,698,375 (GRCm39)	missense	possibly damaging	0.95
R5805:Zfp979	UTSW	4	147,698,067 (GRCm39)	missense	probably damaging	0.99
R5861:Zfp979	UTSW	4	147,697,966 (GRCm39)	nonsense	probably null
R6598:Zfp979	UTSW	4	147,698,223 (GRCm39)	missense	probably damaging	0.99
R6599:Zfp979	UTSW	4	147,698,083 (GRCm39)	missense	probably benign	0.40
R7684:Zfp979	UTSW	4	147,697,799 (GRCm39)	missense	probably damaging	0.99
R7801:Zfp979	UTSW	4	147,698,435 (GRCm39)	missense	probably damaging	0.96
R8035:Zfp979	UTSW	4	147,697,763 (GRCm39)	missense	probably damaging	1.00
R8086:Zfp979	UTSW	4	147,698,004 (GRCm39)	missense	probably damaging	0.99
R8244:Zfp979	UTSW	4	147,697,933 (GRCm39)	missense	possibly damaging	0.92
R8369:Zfp979	UTSW	4	147,697,548 (GRCm39)	missense	possibly damaging	0.73
R8880:Zfp979	UTSW	4	147,697,836 (GRCm39)	missense	probably benign	0.00
R8887:Zfp979	UTSW	4	147,698,219 (GRCm39)	missense	probably damaging	0.96
R8988:Zfp979	UTSW	4	147,697,984 (GRCm39)	missense	probably benign
R9016:Zfp979	UTSW	4	147,697,504 (GRCm39)	missense	possibly damaging	0.68
R9356:Zfp979	UTSW	4	147,698,358 (GRCm39)	missense	probably damaging	0.96

Predicted Primers

PCR Primer
(F):5'- CTAAGAAGGGATTGTTGCATAAAGC -3'
(R):5'- CTGTGTAAACCGTTTAAAGGTGTC -3'

Sequencing Primer
(F):5'- GCATTTGTTACATTCAATGCATTTG -3'
(R):5'- AACCGTTTAAAGGTGTCTTCTACC -3'

Posted On

2018-11-28