Incidental Mutation 'R6961:Cd200l1'
ID 541777
Institutional Source Beutler Lab
Gene Symbol Cd200l1
Ensembl Gene ENSMUSG00000053182
Gene Name CD200 molecule like 1
Synonyms iSEC1, LOC208166, LOC385647, Gm609
MMRRC Submission 045071-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.077) question?
Stock # R6961 (G1)
Quality Score 225.009
Status Validated
Chromosome 16
Chromosomal Location 45232131-45313332 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 45264366 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Phenylalanine at position 64 (Y64F)
Ref Sequence ENSEMBL: ENSMUSP00000110233 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000114585] [ENSMUST00000232138]
AlphaFold E9Q573
Predicted Effect probably benign
Transcript: ENSMUST00000114585
AA Change: Y64F

PolyPhen 2 Score 0.319 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000110233
Gene: ENSMUSG00000053182
AA Change: Y64F

DomainStartEndE-ValueType
IG 18 125 2.21e-5 SMART
transmembrane domain 233 255 N/A INTRINSIC
low complexity region 275 289 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000232138
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.2%
  • 20x: 96.8%
Validation Efficiency 100% (51/51)
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aasdh A G 5: 77,024,148 (GRCm39) L168P probably damaging Het
Atp6v0d1 A G 8: 106,255,849 (GRCm39) L173P probably damaging Het
Baiap2l2 A G 15: 79,168,835 (GRCm39) F23L probably damaging Het
Cdh23 G C 10: 60,485,893 (GRCm39) L41V probably benign Het
Cep120 C A 18: 53,836,277 (GRCm39) E803* probably null Het
Clcn7 C T 17: 25,376,188 (GRCm39) P560S probably damaging Het
Cldn12 A T 5: 5,557,707 (GRCm39) V240D probably damaging Het
Clec1a C T 6: 129,406,946 (GRCm39) E190K probably benign Het
Cntnap5b A G 1: 100,202,197 (GRCm39) E348G probably benign Het
Crispld1 T A 1: 17,832,365 (GRCm39) H450Q probably damaging Het
Dsc2 A T 18: 20,171,279 (GRCm39) N573K probably damaging Het
Fam186a T A 15: 99,838,082 (GRCm39) I2721F probably benign Het
Fbxl13 A G 5: 21,748,740 (GRCm39) F393S probably damaging Het
Fut1 A T 7: 45,268,963 (GRCm39) I306F probably damaging Het
Gas2l3 T C 10: 89,249,153 (GRCm39) D655G probably benign Het
Gm29106 A T 1: 118,128,128 (GRCm39) K607* probably null Het
Gm57858 T A 3: 36,104,766 (GRCm39) I32F possibly damaging Het
Hmg20a T C 9: 56,396,012 (GRCm39) V268A probably benign Het
Il2rb T A 15: 78,370,024 (GRCm39) Y205F probably damaging Het
Ints4 A G 7: 97,190,397 (GRCm39) *965W probably null Het
Itsn2 T A 12: 4,723,420 (GRCm39) C1118* probably null Het
Jakmip1 T C 5: 37,330,697 (GRCm39) L459P probably damaging Het
Klhl8 T C 5: 104,018,435 (GRCm39) T323A possibly damaging Het
Mindy3 C A 2: 12,400,989 (GRCm39) probably null Het
Myo3a A G 2: 22,250,369 (GRCm39) T79A probably benign Het
Myom2 G A 8: 15,167,741 (GRCm39) A1109T probably null Het
Napa C T 7: 15,843,034 (GRCm39) R53* probably null Het
Nudt21 A C 8: 94,755,508 (GRCm39) D133E probably benign Het
Or2y3 T A 17: 38,393,096 (GRCm39) I258F probably damaging Het
Or4c115 T A 2: 88,928,149 (GRCm39) M41L probably benign Het
Or52b1 A T 7: 104,978,913 (GRCm39) I162K probably damaging Het
Or52s19 A G 7: 103,007,789 (GRCm39) V204A possibly damaging Het
Or56a41 A T 7: 104,741,978 (GRCm39) M16K probably benign Het
Or6c7 T C 10: 129,323,331 (GRCm39) F151L probably damaging Het
Pate13 G A 9: 35,819,740 (GRCm39) M1I probably null Het
Pira13 T C 7: 3,828,124 (GRCm39) Y61C probably damaging Het
Pla2g4e G T 2: 120,004,851 (GRCm39) probably null Het
Ptbp1 T C 10: 79,695,111 (GRCm39) probably null Het
Scfd2 A C 5: 74,680,202 (GRCm39) V317G possibly damaging Het
Slc45a1 T C 4: 150,714,110 (GRCm39) M712V probably damaging Het
Smg7 A T 1: 152,717,334 (GRCm39) L919* probably null Het
Sspo T A 6: 48,440,811 (GRCm39) S1758T probably benign Het
Tgfb2 A T 1: 186,382,032 (GRCm39) M165K possibly damaging Het
Tie1 C T 4: 118,343,402 (GRCm39) V154M probably damaging Het
Timm17a A G 1: 135,238,816 (GRCm39) probably benign Het
Tlr5 C T 1: 182,801,076 (GRCm39) R127* probably null Het
Ttc29 A C 8: 79,003,545 (GRCm39) I254L possibly damaging Het
Unc79 T C 12: 103,079,174 (GRCm39) S1780P probably damaging Het
Vmn2r106 A T 17: 20,488,646 (GRCm39) Y584* probably null Het
Zbtb24 A G 10: 41,331,171 (GRCm39) E366G probably damaging Het
Other mutations in Cd200l1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00435:Cd200l1 APN 16 45,264,483 (GRCm39) missense probably damaging 1.00
IGL02822:Cd200l1 APN 16 45,262,968 (GRCm39) missense probably damaging 0.99
PIT4618001:Cd200l1 UTSW 16 45,264,297 (GRCm39) missense probably benign 0.08
R0565:Cd200l1 UTSW 16 45,264,536 (GRCm39) intron probably benign
R1561:Cd200l1 UTSW 16 45,262,875 (GRCm39) missense possibly damaging 0.90
R4632:Cd200l1 UTSW 16 45,238,271 (GRCm39) missense probably benign 0.34
R4667:Cd200l1 UTSW 16 45,264,526 (GRCm39) missense probably benign 0.01
R5887:Cd200l1 UTSW 16 45,238,279 (GRCm39) missense probably damaging 0.99
R6181:Cd200l1 UTSW 16 45,238,260 (GRCm39) missense probably benign 0.01
R6562:Cd200l1 UTSW 16 45,264,442 (GRCm39) missense probably benign 0.03
R6922:Cd200l1 UTSW 16 45,264,294 (GRCm39) missense probably benign 0.31
R7830:Cd200l1 UTSW 16 45,262,917 (GRCm39) missense probably damaging 1.00
R8133:Cd200l1 UTSW 16 45,264,304 (GRCm39) missense probably benign
R8459:Cd200l1 UTSW 16 45,238,271 (GRCm39) missense probably benign 0.06
R8483:Cd200l1 UTSW 16 45,240,235 (GRCm39) missense possibly damaging 0.92
R8810:Cd200l1 UTSW 16 45,264,199 (GRCm39) missense probably benign 0.04
R8950:Cd200l1 UTSW 16 45,263,007 (GRCm39) missense possibly damaging 0.46
R8988:Cd200l1 UTSW 16 45,238,271 (GRCm39) missense probably benign 0.01
R9040:Cd200l1 UTSW 16 45,264,509 (GRCm39) missense possibly damaging 0.82
R9729:Cd200l1 UTSW 16 45,264,237 (GRCm39) missense possibly damaging 0.63
X0011:Cd200l1 UTSW 16 45,240,234 (GRCm39) missense possibly damaging 0.92
X0019:Cd200l1 UTSW 16 45,263,008 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- CAATCACCACCAGCTGTTTATTATC -3'
(R):5'- GGATCTCATTTTCAGAGTCTTCACAG -3'

Sequencing Primer
(F):5'- ACCCCTCTTTATAGAAACCTTCAGG -3'
(R):5'- TTCAGAGTCTTCACAGAGGATAAAGC -3'
Posted On 2018-11-28