Mutagenetix > Incidental Mutation

Incidental Mutation 'R6981:Hspa1a'

542705

Institutional Source

Beutler Lab

Gene Symbol

Hspa1a

Ensembl Gene

ENSMUSG00000091971

Gene Name

heat shock protein 1A

Synonyms

Hsp68, Hsp70a1, Hsp70.3, Hsp70-3

MMRRC Submission

045089-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R6981 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

35188335-35191132 bp(-) (GRCm39)

Type of Mutation

splice site (3 bp from exon)

DNA Base Change (assembly)

A to T at 35189267 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000133726 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000007248] [ENSMUST00000087328] [ENSMUST00000173680]

AlphaFold

Q61696

Predicted Effect

probably benign
Transcript: ENSMUST00000007248

SMART Domains

Protein: ENSMUSP00000007248
Gene: ENSMUSG00000007033

Domain	Start	End	E-Value	Type
Pfam:HSP70	8	614	6.5e-269	PFAM
low complexity region	616	629	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000087328
AA Change: Y545*

SMART Domains

Protein: ENSMUSP00000084586
Gene: ENSMUSG00000091971
AA Change: Y545*

Domain	Start	End	E-Value	Type
Pfam:HSP70	6	612	1.3e-268	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000173680

SMART Domains

Protein: ENSMUSP00000133726
Gene: ENSMUSG00000092609

Domain	Start	End	E-Value	Type
low complexity region	8	26	N/A	INTRINSIC
low complexity region	36	57	N/A	INTRINSIC
low complexity region	65	87	N/A	INTRINSIC
internal_repeat_1	91	102	5.9e-5	PROSPERO
internal_repeat_1	113	124	5.9e-5	PROSPERO
low complexity region	134	146	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 97.7%

Validation Efficiency

99% (68/69)

MGI Phenotype

PHENOTYPE: At the cellular level, mice homozygous for a knock-out allele exhibit impaired thermotolerance and increased sensitivity to heat stress-induced apoptosis. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930438A08Rik	G	A	11: 58,184,544 (GRCm39)		probably benign	Het
5031439G07Rik	A	C	15: 84,833,798 (GRCm39)	Y419*	probably null	Het
Abca2	T	A	2: 25,334,151 (GRCm39)	F1809L	probably damaging	Het
Ache	C	T	5: 137,289,940 (GRCm39)	T423I	probably benign	Het
Acvrl1	A	G	15: 101,036,226 (GRCm39)	T395A	probably damaging	Het
Ap3b2	A	G	7: 81,127,741 (GRCm39)	I145T	probably damaging	Het
Arhgef4	A	C	1: 34,761,533 (GRCm39)	Q263P	unknown	Het
Asgr2	C	T	11: 69,987,636 (GRCm39)	L45F	probably damaging	Het
Baiap2l1	T	A	5: 144,222,389 (GRCm39)	Y122F	possibly damaging	Het
C1ra	G	A	6: 124,494,684 (GRCm39)	E316K	probably benign	Het
Car8	A	T	4: 8,185,650 (GRCm39)		probably null	Het
Carns1	T	C	19: 4,220,081 (GRCm39)	T385A	probably benign	Het
Ccdc47	T	C	11: 106,093,563 (GRCm39)	T41A	probably benign	Het
Ccne1	A	T	7: 37,797,998 (GRCm39)		probably benign	Het
Cdh4	C	T	2: 179,439,297 (GRCm39)	T148I	probably benign	Het
Cep85	C	T	4: 133,879,572 (GRCm39)	R392Q	probably damaging	Het
Ces1h	T	C	8: 94,080,123 (GRCm39)	T464A	unknown	Het
Cfl1	T	A	19: 5,542,644 (GRCm39)	S41R	possibly damaging	Het
Crnn	T	C	3: 93,055,442 (GRCm39)	V76A	probably damaging	Het
Cspg4	A	G	9: 56,794,385 (GRCm39)	T707A	probably benign	Het
Dgkh	A	T	14: 78,865,182 (GRCm39)	C53*	probably null	Het
Dhx34	G	T	7: 15,949,255 (GRCm39)	A391E	possibly damaging	Het
Dlx1	C	A	2: 71,362,697 (GRCm39)	N201K	probably benign	Het
Dnah6	T	C	6: 72,998,161 (GRCm39)	E4087G	probably benign	Het
Dock6	T	C	9: 21,756,846 (GRCm39)	Y134C	probably damaging	Het
Duox2	A	G	2: 122,121,708 (GRCm39)	V662A	possibly damaging	Het
Dusp12	A	G	1: 170,708,530 (GRCm39)	F12L	probably damaging	Het
Eppk1	T	C	15: 75,995,237 (GRCm39)	E548G	probably benign	Het
Foxj2	A	G	6: 122,819,798 (GRCm39)	D562G	probably benign	Het
Foxj2	A	G	6: 122,805,403 (GRCm39)	I92V	probably damaging	Het
Gm17728	A	G	17: 9,640,991 (GRCm39)	R34G	probably damaging	Het
Gpc6	T	C	14: 117,861,960 (GRCm39)	I292T	probably damaging	Het
Gpr15	T	A	16: 58,538,548 (GRCm39)	K180N	probably benign	Het
Gtf2ird1	G	T	5: 134,412,776 (GRCm39)		probably benign	Het
H2ac12	A	G	13: 22,219,719 (GRCm39)	S2P	probably benign	Het
Hps3	T	A	3: 20,076,984 (GRCm39)	T393S	probably damaging	Het
Hydin	A	G	8: 111,257,704 (GRCm39)	E2378G	possibly damaging	Het
Ighv1-18	A	G	12: 114,646,298 (GRCm39)	L102P	probably damaging	Het
Itga5	T	A	15: 103,258,653 (GRCm39)	N814I	probably benign	Het
Kcnb2	T	C	1: 15,780,480 (GRCm39)	S451P	probably damaging	Het
Klhl32	T	G	4: 24,709,030 (GRCm39)	I112L	probably damaging	Het
Knstrn	T	G	2: 118,664,575 (GRCm39)	I47R	possibly damaging	Het
Med23	T	A	10: 24,771,722 (GRCm39)	S581T	possibly damaging	Het
Mgat5	C	T	1: 127,318,588 (GRCm39)	T361I	probably damaging	Het
Nipal3	A	G	4: 135,206,858 (GRCm39)	V112A	probably damaging	Het
Or10a5	T	A	7: 106,635,956 (GRCm39)	V198D	possibly damaging	Het
Or2b2	A	G	13: 21,887,243 (GRCm39)	E24G	probably benign	Het
Or4k41	T	C	2: 111,279,697 (GRCm39)	F71L	probably benign	Het
Or5g27	A	G	2: 85,409,825 (GRCm39)	M81V	probably benign	Het
Paxip1	G	A	5: 27,970,766 (GRCm39)	Q528*	probably null	Het
Proser2	T	C	2: 6,118,801 (GRCm39)	D14G	probably damaging	Het
Rp1	T	G	1: 4,415,878 (GRCm39)	I1745L	probably benign	Het
Rxfp2	G	T	5: 149,972,313 (GRCm39)		probably null	Het
Slc45a1	T	C	4: 150,723,051 (GRCm39)	S278G	possibly damaging	Het
Smurf1	A	G	5: 144,823,179 (GRCm39)	I455T	possibly damaging	Het
Speg	T	C	1: 75,407,557 (GRCm39)	L3188P	probably damaging	Het
Tcaf3	G	T	6: 42,574,059 (GRCm39)	A51D	probably damaging	Het
Tecrl	T	C	5: 83,502,768 (GRCm39)	N12S	possibly damaging	Het
Tmem17	T	A	11: 22,468,508 (GRCm39)	I149N	possibly damaging	Het
Tmem171	A	G	13: 98,828,976 (GRCm39)	V58A	possibly damaging	Het
Ttn	A	G	2: 76,691,521 (GRCm39)		probably benign	Het
Ubqln5	A	G	7: 103,777,808 (GRCm39)	S339P	probably benign	Het
Vmn1r16	T	A	6: 57,300,473 (GRCm39)	I50L	probably benign	Het
Vmn2r103	A	T	17: 20,013,739 (GRCm39)	Y177F	probably benign	Het
Zfp28	C	A	7: 6,397,692 (GRCm39)	T709K	probably damaging	Het
Zfp958	A	G	8: 4,676,170 (GRCm39)	N46S	probably benign	Het
Zyx	T	A	6: 42,327,291 (GRCm39)	V30E	unknown	Het

Other mutations in Hspa1a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01554:Hspa1a	APN	17	35,189,500 (GRCm39)	missense	probably damaging	1.00
IGL03380:Hspa1a	APN	17	35,189,253 (GRCm39)	missense	probably benign	0.17
R1983:Hspa1a	UTSW	17	35,189,938 (GRCm39)	missense	probably benign	0.01
R2117:Hspa1a	UTSW	17	35,189,455 (GRCm39)	missense	probably damaging	1.00
R3825:Hspa1a	UTSW	17	35,190,703 (GRCm39)	missense	probably damaging	1.00
R3905:Hspa1a	UTSW	17	35,190,703 (GRCm39)	missense	probably damaging	1.00
R3906:Hspa1a	UTSW	17	35,190,703 (GRCm39)	missense	probably damaging	1.00
R3908:Hspa1a	UTSW	17	35,190,703 (GRCm39)	missense	probably damaging	1.00
R3909:Hspa1a	UTSW	17	35,190,703 (GRCm39)	missense	probably damaging	1.00
R4301:Hspa1a	UTSW	17	35,189,482 (GRCm39)	missense	probably benign	0.11
R4453:Hspa1a	UTSW	17	35,189,269 (GRCm39)	missense	probably benign	0.32
R4610:Hspa1a	UTSW	17	35,190,156 (GRCm39)	missense	probably damaging	0.96
R4904:Hspa1a	UTSW	17	35,189,427 (GRCm39)	missense	probably damaging	1.00
R6253:Hspa1a	UTSW	17	35,189,526 (GRCm39)	missense	probably damaging	1.00
R6366:Hspa1a	UTSW	17	35,189,500 (GRCm39)	missense	probably damaging	1.00
R6478:Hspa1a	UTSW	17	35,189,282 (GRCm39)	missense	probably damaging	1.00
R8015:Hspa1a	UTSW	17	35,189,625 (GRCm39)	missense	probably damaging	1.00
R8487:Hspa1a	UTSW	17	35,191,033 (GRCm39)	start gained	probably benign
R8944:Hspa1a	UTSW	17	35,190,019 (GRCm39)	missense	probably benign	0.29
R9779:Hspa1a	UTSW	17	35,190,778 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AATCCACCTCCTCGATGGTG -3'
(R):5'- AACGGCATCCTGAACGTCAC -3'

Sequencing Primer
(F):5'- ACTGATGATGGGGCTGCAC -3'
(R):5'- TCCTGAACGTCACGGCCAC -3'

Posted On

2018-11-28