Incidental Mutation 'R0595:Xkr9'
ID 55043
Institutional Source Beutler Lab
Gene Symbol Xkr9
Ensembl Gene ENSMUSG00000067813
Gene Name X-linked Kx blood group related 9
Synonyms LOC381246
MMRRC Submission 038785-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.065) question?
Stock # R0595 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 13738995-13771947 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 13771008 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 175 (I175V)
Ref Sequence ENSEMBL: ENSMUSP00000085900 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000088542]
AlphaFold Q5GH62
Predicted Effect probably benign
Transcript: ENSMUST00000088542
AA Change: I175V

PolyPhen 2 Score 0.023 (Sensitivity: 0.95; Specificity: 0.81)
SMART Domains Protein: ENSMUSP00000085900
Gene: ENSMUSG00000067813
AA Change: I175V

DomainStartEndE-ValueType
Pfam:XK-related 9 346 2.8e-87 PFAM
Meta Mutation Damage Score 0.0717 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.8%
  • 10x: 97.3%
  • 20x: 94.5%
Validation Efficiency 100% (50/50)
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcb1a T A 5: 8,790,417 (GRCm39) D1093E probably damaging Het
Aldh2 G T 5: 121,711,563 (GRCm39) A276D probably damaging Het
Aldh2 C T 5: 121,711,564 (GRCm39) A276T probably damaging Het
Aldh7a1 C T 18: 56,679,965 (GRCm39) probably benign Het
Ano1 C T 7: 144,143,890 (GRCm39) R964H possibly damaging Het
Apob G A 12: 8,058,369 (GRCm39) V2251I probably benign Het
Atp6v1e1 A G 6: 120,778,091 (GRCm39) V148A probably benign Het
Bbs9 T A 9: 22,408,111 (GRCm39) H73Q probably benign Het
Brca1 A G 11: 101,415,713 (GRCm39) V807A probably benign Het
Cacna1b C T 2: 24,540,001 (GRCm39) probably benign Het
Cadps2 A T 6: 23,321,703 (GRCm39) probably null Het
Cep152 T C 2: 125,436,983 (GRCm39) Q519R probably damaging Het
Cep295 A C 9: 15,243,487 (GRCm39) Y1608* probably null Het
Cfap54 T C 10: 92,720,598 (GRCm39) I2619V unknown Het
Dnajb9 A G 12: 44,255,067 (GRCm39) V7A probably benign Het
Ep400 T C 5: 110,851,408 (GRCm39) K1358R unknown Het
Fbxw7 C A 3: 84,884,674 (GRCm39) probably null Het
Fsip2 T C 2: 82,777,296 (GRCm39) Y108H probably damaging Het
Ggt6 T A 11: 72,328,493 (GRCm39) L331Q probably damaging Het
Ifitm1 T A 7: 140,548,242 (GRCm39) I25N possibly damaging Het
Krt75 C T 15: 101,476,789 (GRCm39) E367K probably damaging Het
Lifr A G 15: 7,206,950 (GRCm39) Y487C probably damaging Het
Map3k6 G T 4: 132,968,574 (GRCm39) G59W probably damaging Het
Mme A G 3: 63,235,602 (GRCm39) T129A probably benign Het
Mmp10 G A 9: 7,508,199 (GRCm39) E442K probably benign Het
Myh13 T C 11: 67,235,672 (GRCm39) S646P probably benign Het
Nbea A T 3: 55,535,917 (GRCm39) I2889N probably benign Het
Nlrp4d T A 7: 10,114,972 (GRCm39) K581N probably benign Het
Nr3c2 C T 8: 77,636,233 (GRCm39) P445S possibly damaging Het
Or5p63 A T 7: 107,810,868 (GRCm39) N289K probably damaging Het
Pck1 T A 2: 172,998,822 (GRCm39) V360E probably damaging Het
Plekha7 T C 7: 115,744,203 (GRCm39) D766G probably damaging Het
Prag1 A G 8: 36,614,156 (GRCm39) N1236S probably damaging Het
Prkdc A C 16: 15,625,952 (GRCm39) Q3326P probably damaging Het
Prrc2b T C 2: 32,073,189 (GRCm39) M57T probably damaging Het
Rb1 A T 14: 73,511,120 (GRCm39) F330I probably damaging Het
Rufy4 A G 1: 74,180,089 (GRCm39) E448G possibly damaging Het
Scn10a T A 9: 119,495,129 (GRCm39) M371L probably benign Het
Sgta T C 10: 80,884,742 (GRCm39) D189G probably damaging Het
Spata31d1b A G 13: 59,864,091 (GRCm39) H413R probably benign Het
Stau2 T C 1: 16,510,674 (GRCm39) T95A probably damaging Het
Supt4a C T 11: 87,633,982 (GRCm39) probably null Het
Tanc2 A G 11: 105,605,003 (GRCm39) probably null Het
Tap2 T A 17: 34,431,328 (GRCm39) V422D probably damaging Het
Tas2r138 A G 6: 40,589,799 (GRCm39) L149P probably damaging Het
Tex15 T C 8: 34,062,645 (GRCm39) S692P probably damaging Het
Tgm2 C T 2: 157,984,962 (GRCm39) R48H probably damaging Het
Ticrr T A 7: 79,345,311 (GRCm39) F1725L possibly damaging Het
Tnpo2 T A 8: 85,778,670 (GRCm39) C672* probably null Het
Zfp428 T A 7: 24,214,803 (GRCm39) S140T probably benign Het
Other mutations in Xkr9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01990:Xkr9 APN 1 13,771,203 (GRCm39) missense probably benign 0.00
IGL02090:Xkr9 APN 1 13,771,600 (GRCm39) missense probably damaging 1.00
IGL02405:Xkr9 APN 1 13,742,997 (GRCm39) splice site probably benign
IGL02523:Xkr9 APN 1 13,754,474 (GRCm39) missense probably benign 0.01
IGL02792:Xkr9 APN 1 13,771,027 (GRCm39) missense probably damaging 1.00
IGL02820:Xkr9 APN 1 13,771,173 (GRCm39) missense probably benign
IGL02821:Xkr9 APN 1 13,742,799 (GRCm39) missense probably damaging 1.00
IGL03170:Xkr9 APN 1 13,771,036 (GRCm39) missense possibly damaging 0.72
IGL03222:Xkr9 APN 1 13,771,505 (GRCm39) nonsense probably null
R0044:Xkr9 UTSW 1 13,754,286 (GRCm39) nonsense probably null
R0044:Xkr9 UTSW 1 13,754,286 (GRCm39) nonsense probably null
R1337:Xkr9 UTSW 1 13,771,348 (GRCm39) missense possibly damaging 0.94
R1670:Xkr9 UTSW 1 13,771,167 (GRCm39) missense probably damaging 0.97
R5007:Xkr9 UTSW 1 13,771,387 (GRCm39) missense probably damaging 0.98
R6133:Xkr9 UTSW 1 13,754,359 (GRCm39) missense probably benign 0.01
R6302:Xkr9 UTSW 1 13,742,726 (GRCm39) missense probably damaging 1.00
R8153:Xkr9 UTSW 1 13,754,363 (GRCm39) missense probably benign 0.10
R8440:Xkr9 UTSW 1 13,771,603 (GRCm39) missense probably benign 0.31
R8520:Xkr9 UTSW 1 13,771,603 (GRCm39) missense probably benign 0.31
R8823:Xkr9 UTSW 1 13,742,832 (GRCm39) missense probably benign 0.43
R8985:Xkr9 UTSW 1 13,770,990 (GRCm39) missense probably benign
R9084:Xkr9 UTSW 1 13,742,733 (GRCm39) missense probably benign 0.15
R9441:Xkr9 UTSW 1 13,771,587 (GRCm39) missense possibly damaging 0.94
R9658:Xkr9 UTSW 1 13,771,318 (GRCm39) missense probably damaging 1.00
X0025:Xkr9 UTSW 1 13,742,858 (GRCm39) missense probably benign 0.43
Predicted Primers PCR Primer
(F):5'- TGTGTGCTGGTAAAGGTGCCAAATC -3'
(R):5'- AATGCCCATATGAAGCCTGTGATCC -3'

Sequencing Primer
(F):5'- CTACTAATGCAATGTGGGGATATCG -3'
(R):5'- GCCTGTGATCCAAAGAAATAATAGC -3'
Posted On 2013-07-11