Mutagenetix > Incidental Mutation

Incidental Mutation 'R7130:Slc38a2'

552606

Institutional Source

Beutler Lab

Gene Symbol

Slc38a2

Ensembl Gene

ENSMUSG00000022462

Gene Name

solute carrier family 38, member 2

Synonyms

SNAT2, 5033402L14Rik

MMRRC Submission

045215-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.240) question?

Stock #

R7130 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

96585273-96597611 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 96589263 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Glutamine at position 410 (H410Q)

Ref Sequence

ENSEMBL: ENSMUSP00000023099 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000023099]

AlphaFold

Q8CFE6

Predicted Effect

probably damaging
Transcript: ENSMUST00000023099
AA Change: H410Q

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000023099
Gene: ENSMUSG00000022462
AA Change: H410Q

Domain	Start	End	E-Value	Type
low complexity region	10	30	N/A	INTRINSIC
Pfam:Aa_trans	69	492	2e-76	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

98% (63/64)

Allele List at MGI

All alleles(18) : Targeted(2) Gene trapped(16)

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210408I21Rik	C	T	13: 77,418,021 (GRCm39)	T735I	possibly damaging	Het
Abtb3	A	C	10: 85,223,419 (GRCm39)	D76A	unknown	Het
Adcy10	T	A	1: 165,331,616 (GRCm39)	V83E	probably damaging	Het
Adcy6	A	G	15: 98,495,110 (GRCm39)	Y701H	probably benign	Het
Apbb1	G	A	7: 105,214,538 (GRCm39)	H518Y	probably damaging	Het
Arhgap20	T	A	9: 51,761,047 (GRCm39)	V966E	probably damaging	Het
Bbx	T	A	16: 50,030,805 (GRCm39)		probably null	Het
Bpifb9b	T	A	2: 154,153,592 (GRCm39)	N219K	probably damaging	Het
Cdk19	A	G	10: 40,355,761 (GRCm39)	T490A	unknown	Het
Cyb5r1	T	G	1: 134,335,759 (GRCm39)		probably benign	Het
Dnah14	C	T	1: 181,573,523 (GRCm39)	Q2945*	probably null	Het
Eif5b	A	G	1: 38,080,857 (GRCm39)	T733A	probably damaging	Het
Esyt3	T	A	9: 99,200,223 (GRCm39)	D657V	probably benign	Het
Fat4	T	A	3: 39,034,936 (GRCm39)	F2863I	probably damaging	Het
Fbxw14	T	A	9: 109,100,350 (GRCm39)	I435L	probably benign	Het
Fus	G	A	7: 127,573,585 (GRCm39)	G253S	unknown	Het
Gdi2	T	C	13: 3,598,891 (GRCm39)	V25A	probably benign	Het
Gm28729	T	G	9: 96,401,457 (GRCm39)	R110S	probably benign	Het
Gucd1	A	G	10: 75,347,951 (GRCm39)	L28P	possibly damaging	Het
Hmgxb3	C	T	18: 61,265,450 (GRCm39)	S1176N	probably benign	Het
Islr2	T	C	9: 58,105,575 (GRCm39)	T606A	probably damaging	Het
Kcnf1	T	C	12: 17,225,810 (GRCm39)	D137G	probably benign	Het
Klkb1	T	A	8: 45,728,575 (GRCm39)	T395S	probably benign	Het
Morc2b	T	A	17: 33,355,262 (GRCm39)	S837C	possibly damaging	Het
Mrpl9	A	G	3: 94,354,597 (GRCm39)	R204G	probably benign	Het
Naaladl1	A	G	19: 6,156,018 (GRCm39)	E64G	probably benign	Het
Nlrx1	T	C	9: 44,173,638 (GRCm39)	E521G	possibly damaging	Het
Npc2	A	G	12: 84,812,081 (GRCm39)	S54P	probably damaging	Het
Nxpe2	T	C	9: 48,250,837 (GRCm39)	M37V	probably benign	Het
Or2ag17	A	G	7: 106,389,389 (GRCm39)	L273P	probably benign	Het
Or2w1	T	G	13: 21,317,416 (GRCm39)	V157G	probably benign	Het
Or4b1b	T	C	2: 90,112,266 (GRCm39)	I218V	probably benign	Het
Or9s27	C	T	1: 92,516,634 (GRCm39)	A194V	probably benign	Het
Osbpl9	G	A	4: 108,940,296 (GRCm39)	R213C	probably benign	Het
Pard3	C	A	8: 128,142,164 (GRCm39)	R907S	probably damaging	Het
Pcdhb11	A	G	18: 37,556,559 (GRCm39)	S630G	probably benign	Het
Pcdhb17	G	A	18: 37,618,498 (GRCm39)	C96Y	probably damaging	Het
Pclo	C	T	5: 14,729,356 (GRCm39)	T2738I	unknown	Het
Pcnx2	G	A	8: 126,480,323 (GRCm39)	R1995*	probably null	Het
Ppm1a	T	A	12: 72,831,007 (GRCm39)	N177K	probably benign	Het
Rfx6	A	T	10: 51,554,476 (GRCm39)	K106*	probably null	Het
Rhoh	T	C	5: 66,050,207 (GRCm39)	V159A	probably damaging	Het
Rreb1	T	C	13: 38,083,724 (GRCm39)	V129A	probably damaging	Het
Sdccag8	C	A	1: 176,702,167 (GRCm39)	A424D	probably damaging	Het
Sdf2	T	C	11: 78,136,823 (GRCm39)	M1T	probably null	Het
Sftpb	T	A	6: 72,282,808 (GRCm39)	F94I	possibly damaging	Het
Slc40a1	A	T	1: 45,960,384 (GRCm39)	V68E	probably damaging	Het
Spopfm3	T	C	3: 94,105,834 (GRCm39)	W51R	probably damaging	Het
Srd5a3	T	C	5: 76,297,684 (GRCm39)	V162A	possibly damaging	Het
Stip1	C	T	19: 6,999,178 (GRCm39)	G467S	possibly damaging	Het
Tango6	A	G	8: 107,533,733 (GRCm39)	D953G	probably damaging	Het
Tdrd7	T	C	4: 46,029,693 (GRCm39)	S1009P	probably damaging	Het
Thap3	T	C	4: 152,073,373 (GRCm39)	Y14C	possibly damaging	Het
Tmem143	T	A	7: 45,558,901 (GRCm39)	M281K	possibly damaging	Het
Trio	TACCTTGTTACTGAGCCCTTCTCACCTTCACAGACACCTTGTTACTGAGCCCTTCTCACCTTCACAGATACCTTGTTACTGAGCCCTTCTC	TACCTTGTTACTGAGCCCTTCTCACCTTCACAGATACCTTGTTACTGAGCCCTTCTC	15: 27,742,399 (GRCm39)		probably benign	Het
Tsga10	A	G	1: 37,822,965 (GRCm39)	I516T	probably damaging	Het
Ttn	T	C	2: 76,721,013 (GRCm39)	I6804V	unknown	Het
Ubtfl1	C	A	9: 18,321,143 (GRCm39)	P224T	probably damaging	Het
Umad1	G	T	6: 8,427,185 (GRCm39)	C120F	probably null	Het
Unc93a2	T	C	17: 7,637,824 (GRCm39)	T304A	probably benign	Het
Vinac1	A	T	2: 128,881,101 (GRCm39)	V275D		Het
Vmn2r79	T	C	7: 86,651,474 (GRCm39)	V291A	probably damaging	Het

Other mutations in Slc38a2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01116:Slc38a2	APN	15	96,591,066 (GRCm39)	splice site	probably benign
IGL01522:Slc38a2	APN	15	96,590,936 (GRCm39)	missense	possibly damaging	0.78
IGL01679:Slc38a2	APN	15	96,595,835 (GRCm39)	nonsense	probably null
IGL01720:Slc38a2	APN	15	96,589,092 (GRCm39)	splice site	probably benign
IGL02198:Slc38a2	APN	15	96,590,258 (GRCm39)	missense	probably damaging	0.99
IGL02685:Slc38a2	APN	15	96,589,306 (GRCm39)	missense	probably benign	0.00
IGL03211:Slc38a2	APN	15	96,596,153 (GRCm39)	splice site	probably null
P0014:Slc38a2	UTSW	15	96,588,042 (GRCm39)	missense	probably damaging	0.96
R0068:Slc38a2	UTSW	15	96,589,173 (GRCm39)	splice site	probably null
R0068:Slc38a2	UTSW	15	96,589,173 (GRCm39)	splice site	probably null
R0684:Slc38a2	UTSW	15	96,593,168 (GRCm39)	nonsense	probably null
R1537:Slc38a2	UTSW	15	96,591,034 (GRCm39)	missense	possibly damaging	0.50
R1638:Slc38a2	UTSW	15	96,590,417 (GRCm39)	missense	probably damaging	1.00
R1922:Slc38a2	UTSW	15	96,589,043 (GRCm39)	missense	possibly damaging	0.95
R2294:Slc38a2	UTSW	15	96,589,643 (GRCm39)	missense	probably benign
R4672:Slc38a2	UTSW	15	96,596,518 (GRCm39)	missense	probably benign	0.00
R5799:Slc38a2	UTSW	15	96,592,970 (GRCm39)	missense	probably benign	0.29
R5878:Slc38a2	UTSW	15	96,590,465 (GRCm39)	missense	probably damaging	0.96
R6188:Slc38a2	UTSW	15	96,590,397 (GRCm39)	critical splice donor site	probably null
R7097:Slc38a2	UTSW	15	96,591,182 (GRCm39)	missense	probably damaging	0.98
R7122:Slc38a2	UTSW	15	96,591,182 (GRCm39)	missense	probably damaging	0.98
R7224:Slc38a2	UTSW	15	96,589,240 (GRCm39)	missense	probably damaging	1.00
R7776:Slc38a2	UTSW	15	96,588,033 (GRCm39)	missense	probably benign	0.04
R7896:Slc38a2	UTSW	15	96,591,466 (GRCm39)	missense	probably damaging	1.00
R7964:Slc38a2	UTSW	15	96,590,453 (GRCm39)	missense	probably benign	0.29
R8427:Slc38a2	UTSW	15	96,590,294 (GRCm39)	missense	probably damaging	0.98
R8487:Slc38a2	UTSW	15	96,593,172 (GRCm39)	nonsense	probably null
R8845:Slc38a2	UTSW	15	96,592,900 (GRCm39)	missense	probably benign	0.00
R9400:Slc38a2	UTSW	15	96,591,053 (GRCm39)	missense	probably benign	0.14
R9606:Slc38a2	UTSW	15	96,591,172 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TAAAGATCAGCATGGCAGCC -3'
(R):5'- TCATCCTGTGGCAGAAAGC -3'

Sequencing Primer
(F):5'- CGACGCCCCTGTAAAGC -3'
(R):5'- AAAGCAGGGGTATCCGTTCC -3'

Posted On

2019-05-15