Incidental Mutation 'R7133:Ctnnd2'
ID 552856
Institutional Source Beutler Lab
Gene Symbol Ctnnd2
Ensembl Gene ENSMUSG00000022240
Gene Name catenin delta 2
Synonyms Nprap, Catnd2, neurojugin, catenin (cadherin associated protein), delta 2
MMRRC Submission 045218-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R7133 (G1)
Quality Score 225.009
Status Validated
Chromosome 15
Chromosomal Location 30172739-31029487 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 30480995 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 81 (E81G)
Ref Sequence ENSEMBL: ENSMUSP00000080427 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000081728] [ENSMUST00000226116] [ENSMUST00000226119] [ENSMUST00000228282]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000081728
AA Change: E81G

PolyPhen 2 Score 0.471 (Sensitivity: 0.89; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000080427
Gene: ENSMUSG00000022240
AA Change: E81G

DomainStartEndE-ValueType
coiled coil region 50 84 N/A INTRINSIC
low complexity region 87 97 N/A INTRINSIC
low complexity region 148 159 N/A INTRINSIC
low complexity region 216 230 N/A INTRINSIC
low complexity region 238 257 N/A INTRINSIC
ARM 577 617 1.85e-8 SMART
ARM 621 662 1.15e-9 SMART
ARM 663 720 1.51e1 SMART
ARM 722 769 2.74e1 SMART
ARM 830 871 4.88e0 SMART
ARM 902 942 2.76e-7 SMART
low complexity region 964 973 N/A INTRINSIC
ARM 995 1039 5.64e-4 SMART
low complexity region 1086 1099 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000226116
AA Change: E81G

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
Predicted Effect possibly damaging
Transcript: ENSMUST00000226119
AA Change: E81G

PolyPhen 2 Score 0.606 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect probably benign
Transcript: ENSMUST00000228282
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 98% (91/93)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an adhesive junction associated protein of the armadillo/beta-catenin superfamily and is implicated in brain and eye development and cancer formation. The protein encoded by this gene promotes the disruption of E-cadherin based adherens junction to favor cell spreading upon stimulation by hepatocyte growth factor. This gene is overexpressed in prostate adenocarcinomas and is associated with decreased expression of tumor suppressor E-cadherin in this tissue. This gene resides in a region of the short arm of chromosome 5 that is deleted in Cri du Chat syndrome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2013]
PHENOTYPE: Mice homozygous for a reporter allele exhibit abnormal conditioning, spatial learning and coordination behaviors and abnormal long term potentiation. [provided by MGI curators]
Allele List at MGI

All alleles(1) : Targeted(1)

Other mutations in this stock
Total: 91 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2610008E11Rik T A 10: 78,902,473 (GRCm39) K614N probably benign Het
2610008E11Rik T G 10: 78,902,474 (GRCm39) K614T probably benign Het
Ahsa1 T A 12: 87,317,116 (GRCm39) S120R probably benign Het
Anapc16 G A 10: 59,832,302 (GRCm39) T37I possibly damaging Het
Arid2 C A 15: 96,276,756 (GRCm39) P1606H probably damaging Het
Ash1l TATCTCCTTTTCCAAAAA TA 3: 88,890,764 (GRCm39) probably null Het
Asic1 T A 15: 99,569,968 (GRCm39) N96K probably damaging Het
Asph A T 4: 9,484,575 (GRCm39) D582E probably benign Het
Astn1 A G 1: 158,400,557 (GRCm39) D528G probably damaging Het
Atp9b A G 18: 80,952,871 (GRCm39) V164A Het
Cbx6 C T 15: 79,712,866 (GRCm39) G187D possibly damaging Het
Cct7 A G 6: 85,443,627 (GRCm39) T332A probably benign Het
Clca4a A T 3: 144,667,651 (GRCm39) L440* probably null Het
Crybg2 A T 4: 133,792,754 (GRCm39) I130F probably benign Het
Crybg3 T C 16: 59,357,167 (GRCm39) E798G probably damaging Het
Cwc22 C T 2: 77,759,822 (GRCm39) R75H possibly damaging Het
Cym T G 3: 107,121,530 (GRCm39) D254A probably damaging Het
Dcaf11 T A 14: 55,806,383 (GRCm39) probably null Het
Dctn1 A T 6: 83,157,026 (GRCm39) probably null Het
Dennd5a C T 7: 109,495,449 (GRCm39) probably null Het
Dmpk T A 7: 18,821,232 (GRCm39) C217S probably damaging Het
Dnah1 C A 14: 31,008,033 (GRCm39) V2125L probably benign Het
Exoc4 G A 6: 33,415,408 (GRCm39) A427T probably benign Het
Farp2 G T 1: 93,548,956 (GRCm39) V1021F probably damaging Het
Flg2 T C 3: 93,127,069 (GRCm39) S1994P unknown Het
Fmnl1 T C 11: 103,072,610 (GRCm39) probably null Het
Frem2 T A 3: 53,479,760 (GRCm39) I1978F possibly damaging Het
Gan T A 8: 117,913,969 (GRCm39) C122* probably null Het
Gpr25 T A 1: 136,188,559 (GRCm39) Y18F probably damaging Het
Hoxa7 C T 6: 52,192,720 (GRCm39) E223K probably benign Het
Hypk A G 2: 121,283,961 (GRCm39) probably null Het
Ibsp A T 5: 104,450,172 (GRCm39) K27* probably null Het
Ighv6-5 T A 12: 114,380,395 (GRCm39) T41S probably benign Het
Ighv9-4 T C 12: 114,263,757 (GRCm39) M59V probably benign Het
Il17rb T C 14: 29,718,828 (GRCm39) D418G probably damaging Het
Ints5 T A 19: 8,872,923 (GRCm39) V294E probably damaging Het
Irx6 G A 8: 93,405,041 (GRCm39) C303Y probably damaging Het
Itih3 T A 14: 30,639,655 (GRCm39) I389F probably damaging Het
Lama1 C T 17: 68,089,141 (GRCm39) T1604I Het
Lama3 C A 18: 12,672,843 (GRCm39) Q873K probably benign Het
Lhx1 T G 11: 84,410,746 (GRCm39) S284R probably benign Het
Lrba T A 3: 86,302,238 (GRCm39) probably null Het
Lrg1 C T 17: 56,427,592 (GRCm39) G127R possibly damaging Het
Macir G A 1: 97,573,645 (GRCm39) P140L probably benign Het
Mapre1 T A 2: 153,606,883 (GRCm39) L205H probably benign Het
Meltf A G 16: 31,711,617 (GRCm39) N581S probably damaging Het
Mgat5 A C 1: 127,292,926 (GRCm39) M149L probably benign Het
Myh1 A G 11: 67,093,412 (GRCm39) T168A probably benign Het
Naalad2 C T 9: 18,238,673 (GRCm39) V681I probably benign Het
Or51e2 A G 7: 102,391,524 (GRCm39) S229P probably damaging Het
Or52r1c T A 7: 102,735,205 (GRCm39) L155Q probably damaging Het
Pcnx2 T C 8: 126,528,243 (GRCm39) T1326A probably benign Het
Peg3 A T 7: 6,711,944 (GRCm39) C1093S probably damaging Het
Pidd1 T C 7: 141,019,813 (GRCm39) S650G probably benign Het
Pik3c2b T C 1: 133,017,972 (GRCm39) S945P possibly damaging Het
Plec T C 15: 76,060,227 (GRCm39) T3237A possibly damaging Het
Prpf3 A T 3: 95,741,052 (GRCm39) probably null Het
Prpf4b C A 13: 35,085,477 (GRCm39) H974Q probably benign Het
Ptpn3 T C 4: 57,225,863 (GRCm39) T451A probably benign Het
Ptprs A G 17: 56,724,429 (GRCm39) Y1577H probably damaging Het
Rgr C T 14: 36,770,882 (GRCm39) M1I probably null Het
Rxrg A T 1: 167,458,678 (GRCm39) N257I probably benign Het
Sbno2 T C 10: 79,922,146 (GRCm39) D9G probably damaging Het
Scd1 T C 19: 44,395,034 (GRCm39) K64E probably damaging Het
Serpinb1a T A 13: 33,034,308 (GRCm39) I28F possibly damaging Het
Sfmbt2 A T 2: 10,406,818 (GRCm39) E39V probably damaging Het
Slc29a1 A G 17: 45,900,897 (GRCm39) M89T possibly damaging Het
Slco4a1 T A 2: 180,113,856 (GRCm39) V431E possibly damaging Het
Smg1 C T 7: 117,752,131 (GRCm39) C2698Y unknown Het
Sptlc2 C T 12: 87,397,151 (GRCm39) D212N probably benign Het
St6galnac1 T C 11: 116,657,899 (GRCm39) T334A possibly damaging Het
Stim2 A T 5: 54,156,263 (GRCm39) D13V possibly damaging Het
Syne1 A G 10: 5,181,592 (GRCm39) W4248R probably damaging Het
Tanc1 T C 2: 59,627,953 (GRCm39) Y584H probably benign Het
Thoc6 C A 17: 23,892,634 (GRCm39) probably null Het
Trim30a T A 7: 104,078,533 (GRCm39) N181I possibly damaging Het
Trip11 T A 12: 101,850,329 (GRCm39) Q1245L probably damaging Het
Tshz3 A G 7: 36,469,994 (GRCm39) D661G probably benign Het
Ttll8 C A 15: 88,799,630 (GRCm39) V604L probably damaging Het
Ubtfl1 A G 9: 18,320,931 (GRCm39) D153G probably damaging Het
Ufsp2 C A 8: 46,436,661 (GRCm39) N137K probably benign Het
Ugt2a3 A G 5: 87,473,393 (GRCm39) I508T possibly damaging Het
Uso1 G A 5: 92,306,324 (GRCm39) E94K probably benign Het
Usp54 A G 14: 20,611,310 (GRCm39) S1169P probably benign Het
Vmn1r235 C T 17: 21,482,292 (GRCm39) P206S probably benign Het
Vmn1r69 T C 7: 10,314,995 (GRCm39) probably benign Het
Zfp263 T A 16: 3,567,255 (GRCm39) C523* probably null Het
Zfp799 G T 17: 33,039,210 (GRCm39) T352K probably benign Het
Zfr T A 15: 12,180,724 (GRCm39) V951E probably damaging Het
Zfyve26 T C 12: 79,330,926 (GRCm39) D431G probably benign Het
Zswim9 C A 7: 12,993,664 (GRCm39) A831S probably damaging Het
Other mutations in Ctnnd2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00597:Ctnnd2 APN 15 30,647,287 (GRCm39) missense possibly damaging 0.73
IGL01612:Ctnnd2 APN 15 31,005,164 (GRCm39) missense probably damaging 1.00
IGL01923:Ctnnd2 APN 15 30,480,974 (GRCm39) missense probably damaging 0.99
IGL02183:Ctnnd2 APN 15 31,020,886 (GRCm39) missense probably damaging 1.00
IGL02186:Ctnnd2 APN 15 30,480,939 (GRCm39) missense probably damaging 0.99
IGL02226:Ctnnd2 APN 15 30,847,482 (GRCm39) missense probably benign 0.01
IGL02307:Ctnnd2 APN 15 30,647,357 (GRCm39) missense possibly damaging 0.86
IGL02407:Ctnnd2 APN 15 30,966,914 (GRCm39) missense probably damaging 1.00
IGL02474:Ctnnd2 APN 15 30,669,708 (GRCm39) missense possibly damaging 0.71
IGL02718:Ctnnd2 APN 15 31,027,762 (GRCm39) missense probably damaging 1.00
IGL03249:Ctnnd2 APN 15 30,683,382 (GRCm39) missense probably benign 0.45
IGL03328:Ctnnd2 APN 15 30,921,993 (GRCm39) splice site probably benign
carpe UTSW 15 30,905,966 (GRCm39) missense probably damaging 1.00
diem UTSW 15 30,683,493 (GRCm39) missense possibly damaging 0.85
P0016:Ctnnd2 UTSW 15 30,967,084 (GRCm39) missense probably benign 0.00
R0130:Ctnnd2 UTSW 15 30,922,059 (GRCm39) missense probably damaging 1.00
R0408:Ctnnd2 UTSW 15 30,634,823 (GRCm39) missense probably damaging 1.00
R0611:Ctnnd2 UTSW 15 31,009,230 (GRCm39) missense possibly damaging 0.75
R0894:Ctnnd2 UTSW 15 30,332,301 (GRCm39) splice site probably benign
R1112:Ctnnd2 UTSW 15 30,922,026 (GRCm39) missense probably damaging 1.00
R1459:Ctnnd2 UTSW 15 30,847,445 (GRCm39) missense probably damaging 1.00
R1529:Ctnnd2 UTSW 15 30,887,267 (GRCm39) missense possibly damaging 0.91
R1532:Ctnnd2 UTSW 15 30,922,014 (GRCm39) missense probably damaging 1.00
R1701:Ctnnd2 UTSW 15 30,922,127 (GRCm39) missense probably damaging 1.00
R1807:Ctnnd2 UTSW 15 30,620,017 (GRCm39) missense probably damaging 1.00
R1881:Ctnnd2 UTSW 15 31,005,227 (GRCm39) splice site probably benign
R1960:Ctnnd2 UTSW 15 30,647,257 (GRCm39) missense probably damaging 0.96
R2121:Ctnnd2 UTSW 15 30,669,660 (GRCm39) missense probably damaging 1.00
R3839:Ctnnd2 UTSW 15 31,009,174 (GRCm39) splice site probably null
R3967:Ctnnd2 UTSW 15 30,647,075 (GRCm39) missense possibly damaging 0.81
R3980:Ctnnd2 UTSW 15 30,669,589 (GRCm39) missense probably benign 0.14
R4207:Ctnnd2 UTSW 15 30,972,973 (GRCm39) missense probably damaging 0.99
R4279:Ctnnd2 UTSW 15 30,905,966 (GRCm39) missense probably damaging 1.00
R4498:Ctnnd2 UTSW 15 30,620,020 (GRCm39) missense probably damaging 1.00
R4622:Ctnnd2 UTSW 15 31,009,259 (GRCm39) missense probably benign 0.00
R4622:Ctnnd2 UTSW 15 30,887,315 (GRCm39) missense probably benign 0.17
R4860:Ctnnd2 UTSW 15 30,881,313 (GRCm39) missense probably damaging 1.00
R4860:Ctnnd2 UTSW 15 30,881,313 (GRCm39) missense probably damaging 1.00
R4979:Ctnnd2 UTSW 15 31,009,221 (GRCm39) missense probably damaging 1.00
R5086:Ctnnd2 UTSW 15 30,683,493 (GRCm39) missense possibly damaging 0.85
R5330:Ctnnd2 UTSW 15 30,332,261 (GRCm39) missense probably damaging 1.00
R5459:Ctnnd2 UTSW 15 30,887,334 (GRCm39) missense probably damaging 1.00
R5595:Ctnnd2 UTSW 15 30,669,689 (GRCm39) missense probably benign 0.07
R5809:Ctnnd2 UTSW 15 30,847,523 (GRCm39) missense probably damaging 1.00
R5987:Ctnnd2 UTSW 15 30,683,387 (GRCm39) missense probably benign
R6245:Ctnnd2 UTSW 15 30,905,894 (GRCm39) missense probably damaging 1.00
R6379:Ctnnd2 UTSW 15 30,634,844 (GRCm39) missense probably damaging 1.00
R6737:Ctnnd2 UTSW 15 30,966,980 (GRCm39) nonsense probably null
R6979:Ctnnd2 UTSW 15 30,619,376 (GRCm39) missense probably damaging 0.99
R7179:Ctnnd2 UTSW 15 30,683,510 (GRCm39) missense possibly damaging 0.95
R7267:Ctnnd2 UTSW 15 30,683,501 (GRCm39) missense probably benign 0.13
R7275:Ctnnd2 UTSW 15 30,905,855 (GRCm39) missense possibly damaging 0.94
R7386:Ctnnd2 UTSW 15 30,966,914 (GRCm39) missense probably damaging 1.00
R7649:Ctnnd2 UTSW 15 31,027,630 (GRCm39) missense probably benign 0.11
R7814:Ctnnd2 UTSW 15 31,020,874 (GRCm39) missense probably benign 0.00
R7849:Ctnnd2 UTSW 15 31,027,733 (GRCm39) missense probably damaging 1.00
R7857:Ctnnd2 UTSW 15 30,620,076 (GRCm39) missense probably benign 0.01
R8057:Ctnnd2 UTSW 15 30,847,497 (GRCm39) missense possibly damaging 0.89
R8236:Ctnnd2 UTSW 15 30,647,164 (GRCm39) missense probably benign
R8260:Ctnnd2 UTSW 15 30,634,879 (GRCm39) missense possibly damaging 0.84
R8411:Ctnnd2 UTSW 15 30,647,179 (GRCm39) missense probably benign 0.33
R8802:Ctnnd2 UTSW 15 30,967,022 (GRCm39) missense probably damaging 1.00
R8891:Ctnnd2 UTSW 15 30,620,076 (GRCm39) missense probably benign 0.01
R8907:Ctnnd2 UTSW 15 30,905,873 (GRCm39) missense probably damaging 1.00
R8989:Ctnnd2 UTSW 15 30,669,660 (GRCm39) missense probably damaging 1.00
R9017:Ctnnd2 UTSW 15 30,881,316 (GRCm39) missense probably damaging 0.96
R9035:Ctnnd2 UTSW 15 30,332,162 (GRCm39) missense possibly damaging 0.77
R9061:Ctnnd2 UTSW 15 30,806,884 (GRCm39) missense probably damaging 1.00
R9303:Ctnnd2 UTSW 15 30,967,037 (GRCm39) missense probably damaging 0.99
R9475:Ctnnd2 UTSW 15 30,881,276 (GRCm39) missense probably damaging 1.00
Z1088:Ctnnd2 UTSW 15 30,966,959 (GRCm39) missense probably benign 0.28
Predicted Primers PCR Primer
(F):5'- AAGCCCCTGTCTAATTCTCCAG -3'
(R):5'- TCTTAATTCGGGCCCCTTAAAC -3'

Sequencing Primer
(F):5'- TTCTCAAAGTTGCCACCTTGAAAAC -3'
(R):5'- AAACTTCTTTCCCACGTCTAAGTG -3'
Posted On 2019-05-15