Incidental Mutation 'R7144:Rapgef6'
ID |
553660 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
045328-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R7144 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to C
at 54548191 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Proline
at position 792
(T792P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000147135
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094536]
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000108894]
[ENSMUST00000207429]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000094536
AA Change: T502P
PolyPhen 2
Score 0.168 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000092114 Gene: ENSMUSG00000037533 AA Change: T502P
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
853 |
3.88e-84 |
SMART |
low complexity region
|
944 |
957 |
N/A |
INTRINSIC |
low complexity region
|
972 |
989 |
N/A |
INTRINSIC |
low complexity region
|
1016 |
1061 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000101206
AA Change: T787P
PolyPhen 2
Score 0.613 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533 AA Change: T787P
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000102743
AA Change: T787P
PolyPhen 2
Score 0.613 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533 AA Change: T787P
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000108894
AA Change: T502P
PolyPhen 2
Score 0.874 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000104522 Gene: ENSMUSG00000037533 AA Change: T502P
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
810 |
5.35e-87 |
SMART |
low complexity region
|
952 |
965 |
N/A |
INTRINSIC |
low complexity region
|
980 |
997 |
N/A |
INTRINSIC |
low complexity region
|
1024 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000207429
AA Change: T792P
PolyPhen 2
Score 0.777 (Sensitivity: 0.85; Specificity: 0.92)
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.3%
|
Validation Efficiency |
99% (95/96) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 96 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca16 |
A |
T |
7: 120,032,796 (GRCm39) |
I272F |
possibly damaging |
Het |
Adcy10 |
G |
T |
1: 165,337,939 (GRCm39) |
M184I |
probably benign |
Het |
Aldoa |
G |
T |
7: 126,396,034 (GRCm39) |
T124N |
possibly damaging |
Het |
Ap4e1 |
T |
A |
2: 126,853,727 (GRCm39) |
I55N |
probably damaging |
Het |
Arhgap21 |
T |
C |
2: 20,870,198 (GRCm39) |
T913A |
probably benign |
Het |
Atrnl1 |
G |
A |
19: 58,030,784 (GRCm39) |
E1309K |
probably damaging |
Het |
BC034090 |
A |
T |
1: 155,117,777 (GRCm39) |
C114S |
probably damaging |
Het |
Brinp2 |
A |
G |
1: 158,122,994 (GRCm39) |
|
probably null |
Het |
Ccn4 |
T |
A |
15: 66,784,879 (GRCm39) |
V184E |
probably damaging |
Het |
Ccna1 |
G |
T |
3: 54,953,120 (GRCm39) |
H408Q |
probably benign |
Het |
Cd209g |
T |
G |
8: 4,185,189 (GRCm39) |
|
probably benign |
Het |
Cdc20b |
A |
G |
13: 113,219,905 (GRCm39) |
I433V |
probably benign |
Het |
Cdk2ap1 |
G |
A |
5: 124,492,421 (GRCm39) |
P5L |
probably damaging |
Het |
Cep128 |
T |
C |
12: 91,260,933 (GRCm39) |
E310G |
probably damaging |
Het |
Cflar |
G |
T |
1: 58,793,007 (GRCm39) |
V458F |
|
Het |
Clec4b2 |
A |
G |
6: 123,158,343 (GRCm39) |
T70A |
probably benign |
Het |
Cntnap5c |
A |
G |
17: 58,593,883 (GRCm39) |
T741A |
probably benign |
Het |
Csf3r |
A |
T |
4: 125,937,515 (GRCm39) |
T800S |
probably benign |
Het |
Csnk1g2 |
T |
C |
10: 80,473,733 (GRCm39) |
Y67H |
probably damaging |
Het |
Cyp2c67 |
A |
T |
19: 39,604,138 (GRCm39) |
V406E |
probably benign |
Het |
Dnah10 |
A |
G |
5: 124,900,006 (GRCm39) |
D3868G |
probably damaging |
Het |
Dnah7a |
A |
T |
1: 53,737,867 (GRCm39) |
|
probably null |
Het |
Dst |
A |
G |
1: 34,191,324 (GRCm39) |
N208S |
probably damaging |
Het |
Echdc3 |
A |
G |
2: 6,211,224 (GRCm39) |
|
probably null |
Het |
Edrf1 |
T |
C |
7: 133,239,578 (GRCm39) |
S13P |
probably benign |
Het |
Ephb1 |
T |
C |
9: 101,841,276 (GRCm39) |
Y734C |
probably damaging |
Het |
Eps8l1 |
A |
G |
7: 4,475,184 (GRCm39) |
Y325C |
probably damaging |
Het |
Evc2 |
A |
G |
5: 37,544,183 (GRCm39) |
D644G |
probably damaging |
Het |
Eya4 |
A |
C |
10: 23,048,943 (GRCm39) |
D54E |
probably benign |
Het |
Filip1 |
T |
C |
9: 79,727,495 (GRCm39) |
S375G |
possibly damaging |
Het |
Fmo9 |
A |
G |
1: 166,505,189 (GRCm39) |
M68T |
probably benign |
Het |
Gemin5 |
G |
C |
11: 58,032,489 (GRCm39) |
P772A |
probably benign |
Het |
Gle1 |
T |
G |
2: 29,833,805 (GRCm39) |
C401G |
probably damaging |
Het |
Gm7298 |
A |
T |
6: 121,738,546 (GRCm39) |
I376F |
probably damaging |
Het |
Gpr35 |
A |
C |
1: 92,910,353 (GRCm39) |
I22L |
probably benign |
Het |
Grin2b |
T |
G |
6: 135,710,474 (GRCm39) |
D1024A |
possibly damaging |
Het |
Hmcn1 |
T |
C |
1: 150,539,624 (GRCm39) |
N2956D |
probably damaging |
Het |
Htt |
T |
C |
5: 35,003,350 (GRCm39) |
L1275P |
probably damaging |
Het |
Ibtk |
T |
C |
9: 85,625,744 (GRCm39) |
D2G |
probably benign |
Het |
Il16 |
T |
A |
7: 83,295,659 (GRCm39) |
D1170V |
probably damaging |
Het |
Iqgap3 |
T |
A |
3: 88,024,217 (GRCm39) |
I1513N |
probably damaging |
Het |
Kiz |
T |
G |
2: 146,792,430 (GRCm39) |
|
probably null |
Het |
Krt12 |
A |
T |
11: 99,306,839 (GRCm39) |
*488K |
probably null |
Het |
Lap3 |
A |
T |
5: 45,654,290 (GRCm39) |
T83S |
probably benign |
Het |
Lars2 |
T |
A |
9: 123,261,058 (GRCm39) |
S410T |
probably damaging |
Het |
Limch1 |
A |
G |
5: 67,175,001 (GRCm39) |
T518A |
probably benign |
Het |
Lrrc49 |
A |
T |
9: 60,522,439 (GRCm39) |
S381T |
probably damaging |
Het |
Lrrk2 |
A |
G |
15: 91,618,258 (GRCm39) |
D919G |
possibly damaging |
Het |
Mmp1a |
A |
T |
9: 7,475,319 (GRCm39) |
S363C |
probably damaging |
Het |
Mrps22 |
A |
C |
9: 98,483,524 (GRCm39) |
|
probably null |
Het |
Mybpc3 |
T |
C |
2: 90,964,949 (GRCm39) |
I1066T |
probably benign |
Het |
Myo10 |
A |
T |
15: 25,724,011 (GRCm39) |
N215I |
probably damaging |
Het |
Myocd |
A |
C |
11: 65,109,474 (GRCm39) |
L99R |
probably damaging |
Het |
Nadk |
T |
G |
4: 155,673,793 (GRCm39) |
I394S |
probably damaging |
Het |
Nadsyn1 |
T |
C |
7: 143,364,952 (GRCm39) |
N251S |
probably damaging |
Het |
Nbeal1 |
G |
C |
1: 60,276,310 (GRCm39) |
V684L |
probably benign |
Het |
Ncapd2 |
G |
A |
6: 125,153,633 (GRCm39) |
P694L |
probably benign |
Het |
Or2ag1 |
T |
A |
7: 106,473,075 (GRCm39) |
I126F |
probably damaging |
Het |
Or2w3b |
A |
C |
11: 58,623,571 (GRCm39) |
L140R |
probably damaging |
Het |
Or4a71 |
T |
C |
2: 89,357,901 (GRCm39) |
I284M |
probably damaging |
Het |
Or5t16 |
G |
T |
2: 86,819,164 (GRCm39) |
R119S |
probably damaging |
Het |
Pcdhb13 |
T |
A |
18: 37,576,309 (GRCm39) |
I229K |
probably damaging |
Het |
Pgbd5 |
A |
T |
8: 125,101,056 (GRCm39) |
M400K |
possibly damaging |
Het |
Phactr3 |
A |
G |
2: 177,944,529 (GRCm39) |
N409S |
probably damaging |
Het |
Pik3c2g |
C |
A |
6: 139,606,868 (GRCm39) |
P305Q |
probably damaging |
Het |
Pik3r4 |
G |
A |
9: 105,527,783 (GRCm39) |
V379M |
probably damaging |
Het |
Pira12 |
A |
G |
7: 3,900,615 (GRCm39) |
V45A |
probably damaging |
Het |
Pkd1l2 |
A |
T |
8: 117,802,870 (GRCm39) |
C250* |
probably null |
Het |
Pramel14 |
A |
C |
4: 143,718,103 (GRCm39) |
S447A |
probably benign |
Het |
Rexo5 |
A |
G |
7: 119,404,414 (GRCm39) |
D170G |
probably damaging |
Het |
Rnf17 |
G |
A |
14: 56,749,789 (GRCm39) |
|
probably null |
Het |
Septin11 |
A |
G |
5: 93,304,725 (GRCm39) |
I181V |
probably benign |
Het |
Serpina1e |
T |
G |
12: 103,913,277 (GRCm39) |
*414C |
probably null |
Het |
Serpine1 |
C |
A |
5: 137,099,918 (GRCm39) |
Q80H |
probably damaging |
Het |
Sh3bp2 |
A |
G |
5: 34,718,975 (GRCm39) |
N560S |
probably benign |
Het |
Slc25a25 |
A |
G |
2: 32,309,178 (GRCm39) |
F221S |
probably damaging |
Het |
Spag17 |
G |
T |
3: 99,934,717 (GRCm39) |
|
probably null |
Het |
Sspn |
T |
C |
6: 145,906,881 (GRCm39) |
L104P |
probably damaging |
Het |
St18 |
A |
C |
1: 6,903,818 (GRCm39) |
E693A |
probably damaging |
Het |
St6galnac3 |
T |
C |
3: 153,117,169 (GRCm39) |
I185V |
possibly damaging |
Het |
St8sia1 |
T |
C |
6: 142,822,395 (GRCm39) |
D156G |
probably damaging |
Het |
Syne2 |
C |
A |
12: 76,052,152 (GRCm39) |
S4092R |
probably benign |
Het |
Tll1 |
T |
A |
8: 64,577,979 (GRCm39) |
D76V |
possibly damaging |
Het |
Tmco1 |
C |
T |
1: 167,136,022 (GRCm39) |
|
probably benign |
Het |
Tnfaip3 |
T |
A |
10: 18,883,029 (GRCm39) |
T179S |
probably benign |
Het |
Trav16 |
T |
C |
14: 53,981,096 (GRCm39) |
I95T |
possibly damaging |
Het |
Trip12 |
A |
T |
1: 84,771,435 (GRCm39) |
S280T |
probably damaging |
Het |
Unc79 |
A |
G |
12: 103,108,885 (GRCm39) |
M2166V |
probably benign |
Het |
Vmn2r1 |
A |
G |
3: 63,997,362 (GRCm39) |
I339M |
probably damaging |
Het |
Vwa5b1 |
A |
G |
4: 138,332,742 (GRCm39) |
|
probably null |
Het |
Washc4 |
A |
T |
10: 83,409,638 (GRCm39) |
|
probably null |
Het |
Wiz |
A |
G |
17: 32,576,602 (GRCm39) |
S642P |
possibly damaging |
Het |
Zeb2 |
T |
A |
2: 45,000,053 (GRCm39) |
K60N |
possibly damaging |
Het |
Zfat |
T |
A |
15: 68,050,631 (GRCm39) |
T797S |
probably benign |
Het |
Zfp74 |
T |
C |
7: 29,634,590 (GRCm39) |
K373E |
probably damaging |
Het |
Zswim5 |
T |
C |
4: 116,833,173 (GRCm39) |
|
probably null |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0125:Rapgef6
|
UTSW |
11 |
54,516,701 (GRCm39) |
nonsense |
probably null |
|
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1851:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1868:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4823:Rapgef6
|
UTSW |
11 |
54,585,326 (GRCm39) |
missense |
probably benign |
0.08 |
R4859:Rapgef6
|
UTSW |
11 |
54,526,989 (GRCm39) |
missense |
probably benign |
|
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- TAGAGGGGTCCTTGTACTCC -3'
(R):5'- GCATGCTGTTTGTTCCTAAAAC -3'
Sequencing Primer
(F):5'- CTTGTACTCCAAGTTGCTTTTGG -3'
(R):5'- TTCCTAAAACACCCATTTTAACAGGG -3'
|
Posted On |
2019-05-15 |