Incidental Mutation 'R7206:Col27a1'
ID |
560604 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Col27a1
|
Ensembl Gene |
ENSMUSG00000045672 |
Gene Name |
collagen, type XXVII, alpha 1 |
Synonyms |
5730512J02Rik |
MMRRC Submission |
045284-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R7206 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
63132246-63253228 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 63153583 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Phenylalanine
at position 645
(Y645F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000043816
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000036300]
[ENSMUST00000184067]
|
AlphaFold |
Q5QNQ9 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000036300
AA Change: Y645F
PolyPhen 2
Score 0.293 (Sensitivity: 0.91; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000043816 Gene: ENSMUSG00000045672 AA Change: Y645F
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
39 |
N/A |
INTRINSIC |
TSPN
|
43 |
223 |
1.1e-5 |
SMART |
low complexity region
|
325 |
343 |
N/A |
INTRINSIC |
low complexity region
|
356 |
372 |
N/A |
INTRINSIC |
low complexity region
|
428 |
443 |
N/A |
INTRINSIC |
low complexity region
|
455 |
467 |
N/A |
INTRINSIC |
low complexity region
|
584 |
597 |
N/A |
INTRINSIC |
Pfam:Collagen
|
609 |
670 |
2.1e-10 |
PFAM |
Pfam:Collagen
|
666 |
731 |
3.7e-10 |
PFAM |
low complexity region
|
790 |
808 |
N/A |
INTRINSIC |
low complexity region
|
817 |
838 |
N/A |
INTRINSIC |
low complexity region
|
858 |
880 |
N/A |
INTRINSIC |
low complexity region
|
886 |
910 |
N/A |
INTRINSIC |
low complexity region
|
912 |
946 |
N/A |
INTRINSIC |
Pfam:Collagen
|
1012 |
1080 |
2.8e-8 |
PFAM |
Pfam:Collagen
|
1033 |
1103 |
3e-9 |
PFAM |
Pfam:Collagen
|
1063 |
1130 |
3.4e-9 |
PFAM |
low complexity region
|
1150 |
1168 |
N/A |
INTRINSIC |
Pfam:Collagen
|
1207 |
1281 |
5.5e-9 |
PFAM |
Pfam:Collagen
|
1261 |
1324 |
8.4e-10 |
PFAM |
Pfam:Collagen
|
1323 |
1384 |
3.8e-12 |
PFAM |
low complexity region
|
1438 |
1466 |
N/A |
INTRINSIC |
internal_repeat_4
|
1467 |
1502 |
1.5e-7 |
PROSPERO |
internal_repeat_2
|
1468 |
1529 |
1.96e-8 |
PROSPERO |
Pfam:Collagen
|
1544 |
1606 |
2.4e-9 |
PFAM |
COLFI
|
1644 |
1845 |
1.28e-40 |
SMART |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000184067
AA Change: Y30F
|
SMART Domains |
Protein: ENSMUSP00000139173 Gene: ENSMUSG00000045672 AA Change: Y30F
Domain | Start | End | E-Value | Type |
Pfam:Collagen
|
23 |
87 |
2.1e-8 |
PFAM |
Pfam:Collagen
|
57 |
145 |
8.3e-8 |
PFAM |
Pfam:Collagen
|
115 |
200 |
9.9e-8 |
PFAM |
low complexity region
|
202 |
223 |
N/A |
INTRINSIC |
low complexity region
|
243 |
265 |
N/A |
INTRINSIC |
low complexity region
|
271 |
295 |
N/A |
INTRINSIC |
low complexity region
|
297 |
331 |
N/A |
INTRINSIC |
internal_repeat_1
|
337 |
442 |
5.17e-20 |
PROSPERO |
Pfam:Collagen
|
448 |
515 |
1.5e-9 |
PFAM |
Pfam:Collagen
|
478 |
543 |
2e-10 |
PFAM |
Pfam:Collagen
|
502 |
566 |
2.5e-9 |
PFAM |
Pfam:Collagen
|
532 |
617 |
4.4e-7 |
PFAM |
Pfam:Collagen
|
594 |
660 |
8.2e-11 |
PFAM |
Pfam:Collagen
|
649 |
709 |
1.4e-10 |
PFAM |
Pfam:Collagen
|
708 |
769 |
2e-12 |
PFAM |
Pfam:Collagen
|
752 |
829 |
5e-8 |
PFAM |
Pfam:Collagen
|
878 |
939 |
2.2e-9 |
PFAM |
|
Meta Mutation Damage Score |
0.0622 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 98.9%
|
Validation Efficiency |
99% (87/88) |
MGI Phenotype |
FUNCTION: This gene encodes the alpha-1 subunit of type XXVII collagen, one of the low abundance fibril-forming collagens found in cartilage. The encoded protein forms a homotrimeric triple helical procollagen that undergoes proteolytic processing during fibril formation. Transgenic mice lacking a portion of the collagenous domain in the encoded protein exhibit skeletal abnormalities, chondrodysplasia and die at birth because of a lung defect. [provided by RefSeq, Dec 2015] PHENOTYPE: Mice homozygous for an in frame deletion display neonatal lethality, respiratory failure, and severe chondrodysplasia. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 87 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aadacl2 |
G |
A |
3: 59,932,662 (GRCm39) |
M392I |
probably benign |
Het |
Aadacl4fm2 |
T |
A |
4: 144,285,211 (GRCm39) |
D142V |
probably damaging |
Het |
Acr |
T |
C |
15: 89,458,374 (GRCm39) |
S352P |
probably benign |
Het |
Adam6a |
T |
C |
12: 113,509,654 (GRCm39) |
C676R |
probably damaging |
Het |
Adgra3 |
T |
C |
5: 50,164,238 (GRCm39) |
D247G |
probably damaging |
Het |
Agxt2 |
A |
T |
15: 10,377,542 (GRCm39) |
E147D |
probably damaging |
Het |
Atp2a1 |
T |
C |
7: 126,047,144 (GRCm39) |
T805A |
probably benign |
Het |
Atp8b4 |
T |
C |
2: 126,300,212 (GRCm39) |
S106G |
probably damaging |
Het |
Ccdc170 |
T |
A |
10: 4,464,120 (GRCm39) |
M87K |
possibly damaging |
Het |
Ccnl2 |
T |
G |
4: 155,905,431 (GRCm39) |
V287G |
possibly damaging |
Het |
Ccr6 |
A |
T |
17: 8,475,781 (GRCm39) |
M329L |
probably benign |
Het |
Cflar |
G |
T |
1: 58,780,150 (GRCm39) |
M248I |
|
Het |
Cib4 |
A |
T |
5: 30,703,110 (GRCm39) |
L5* |
probably null |
Het |
Cxcr2 |
A |
G |
1: 74,198,213 (GRCm39) |
T236A |
possibly damaging |
Het |
Dnah12 |
G |
A |
14: 26,500,869 (GRCm39) |
|
probably null |
Het |
Dnah7a |
A |
T |
1: 53,737,792 (GRCm39) |
L47* |
probably null |
Het |
Dnajb6 |
A |
C |
5: 29,986,335 (GRCm39) |
K301T |
possibly damaging |
Het |
Dpf2 |
T |
A |
19: 5,954,571 (GRCm39) |
I157F |
possibly damaging |
Het |
Drd4 |
G |
A |
7: 140,872,032 (GRCm39) |
G28R |
probably damaging |
Het |
Dus3l |
A |
T |
17: 57,074,807 (GRCm39) |
I310F |
probably damaging |
Het |
Dusp29 |
A |
G |
14: 21,727,102 (GRCm39) |
V182A |
probably damaging |
Het |
Eef1akmt3 |
A |
G |
10: 126,876,862 (GRCm39) |
L95P |
probably damaging |
Het |
Fabp7 |
C |
T |
10: 57,661,087 (GRCm39) |
|
probably benign |
Het |
Fam135a |
T |
C |
1: 24,069,354 (GRCm39) |
N505S |
probably benign |
Het |
Fam216b |
C |
A |
14: 78,322,567 (GRCm39) |
D46Y |
probably damaging |
Het |
Gata6 |
C |
T |
18: 11,054,850 (GRCm39) |
R260C |
probably damaging |
Het |
Gm10800 |
A |
AC |
2: 98,497,378 (GRCm39) |
|
probably null |
Het |
Golgb1 |
A |
G |
16: 36,734,111 (GRCm39) |
I1160M |
probably benign |
Het |
Hjv |
A |
T |
3: 96,435,444 (GRCm39) |
D234V |
probably damaging |
Het |
Kiss1 |
A |
G |
1: 133,255,063 (GRCm39) |
K26E |
probably benign |
Het |
Knl1 |
T |
A |
2: 118,899,780 (GRCm39) |
F494I |
probably benign |
Het |
Ktn1 |
T |
C |
14: 47,932,985 (GRCm39) |
L713S |
probably damaging |
Het |
Loxhd1 |
A |
G |
18: 77,529,513 (GRCm39) |
D2052G |
probably damaging |
Het |
Lpo |
A |
C |
11: 87,698,249 (GRCm39) |
L582R |
probably damaging |
Het |
Map2k3 |
A |
G |
11: 60,834,406 (GRCm39) |
T125A |
|
Het |
Matn3 |
T |
A |
12: 9,011,170 (GRCm39) |
N360K |
probably benign |
Het |
Mlip |
A |
T |
9: 77,072,144 (GRCm39) |
V237E |
probably damaging |
Het |
Mms22l |
T |
C |
4: 24,591,146 (GRCm39) |
V999A |
probably benign |
Het |
Mn1 |
A |
G |
5: 111,568,378 (GRCm39) |
K783E |
possibly damaging |
Het |
Myo1h |
A |
T |
5: 114,457,836 (GRCm39) |
K132* |
probably null |
Het |
Nle1 |
A |
G |
11: 82,795,757 (GRCm39) |
V230A |
probably benign |
Het |
Or1ak2 |
T |
A |
2: 36,827,784 (GRCm39) |
Y218N |
probably damaging |
Het |
Or1e1b-ps1 |
A |
T |
11: 73,845,647 (GRCm39) |
I44F |
probably benign |
Het |
Or4a68 |
T |
C |
2: 89,270,801 (GRCm39) |
|
probably benign |
Het |
Or4f62 |
T |
G |
2: 111,986,804 (GRCm39) |
C169W |
probably damaging |
Het |
Or51f23 |
T |
C |
7: 102,452,891 (GRCm39) |
S69P |
probably damaging |
Het |
Or7e169 |
C |
T |
9: 19,757,856 (GRCm39) |
D20N |
probably damaging |
Het |
Ormdl2 |
T |
A |
10: 128,656,284 (GRCm39) |
H7L |
possibly damaging |
Het |
Pam |
A |
G |
1: 97,823,757 (GRCm39) |
S225P |
probably damaging |
Het |
Pan2 |
C |
A |
10: 128,150,414 (GRCm39) |
Y719* |
probably null |
Het |
Ppfia4 |
T |
C |
1: 134,255,127 (GRCm39) |
S243G |
probably benign |
Het |
Ppig |
T |
G |
2: 69,571,910 (GRCm39) |
S210A |
unknown |
Het |
Ppwd1 |
A |
T |
13: 104,350,106 (GRCm39) |
N426K |
probably damaging |
Het |
Prxl2a |
T |
A |
14: 40,726,142 (GRCm39) |
M12L |
probably benign |
Het |
Rnf10 |
T |
G |
5: 115,382,180 (GRCm39) |
D675A |
probably benign |
Het |
Rrp12 |
A |
T |
19: 41,866,478 (GRCm39) |
L619H |
probably damaging |
Het |
Rsph10b |
C |
T |
5: 143,898,010 (GRCm39) |
T497I |
possibly damaging |
Het |
Scnm1 |
A |
T |
3: 95,041,205 (GRCm39) |
M1K |
probably null |
Het |
Scp2 |
G |
T |
4: 107,931,638 (GRCm39) |
D332E |
probably benign |
Het |
Senp3 |
T |
C |
11: 69,569,557 (GRCm39) |
I314V |
probably benign |
Het |
Sfmbt1 |
T |
A |
14: 30,533,330 (GRCm39) |
|
probably null |
Het |
Slc44a2 |
T |
C |
9: 21,258,103 (GRCm39) |
F451S |
probably damaging |
Het |
Slfn1 |
A |
T |
11: 83,012,837 (GRCm39) |
M318L |
probably benign |
Het |
Syne2 |
C |
T |
12: 76,051,531 (GRCm39) |
S4087L |
probably benign |
Het |
Syt7 |
A |
G |
19: 10,395,337 (GRCm39) |
Y49C |
probably damaging |
Het |
Tas2r134 |
T |
C |
2: 51,518,120 (GRCm39) |
Y200H |
probably benign |
Het |
Tgfbr1 |
A |
T |
4: 47,402,941 (GRCm39) |
H315L |
probably damaging |
Het |
Tmem184c |
A |
G |
8: 78,323,206 (GRCm39) |
V552A |
possibly damaging |
Het |
Tnxb |
A |
G |
17: 34,923,075 (GRCm39) |
R2553G |
possibly damaging |
Het |
Tomm40 |
C |
G |
7: 19,444,861 (GRCm39) |
R173S |
probably benign |
Het |
Tonsl |
T |
C |
15: 76,517,851 (GRCm39) |
D650G |
probably damaging |
Het |
Tpo |
G |
C |
12: 30,153,133 (GRCm39) |
S407W |
possibly damaging |
Het |
Trank1 |
T |
C |
9: 111,174,583 (GRCm39) |
|
probably null |
Het |
Trp53tg5 |
T |
C |
2: 164,313,378 (GRCm39) |
E99G |
probably damaging |
Het |
Tubb2a |
C |
A |
13: 34,259,505 (GRCm39) |
S95I |
possibly damaging |
Het |
Vav2 |
C |
A |
2: 27,226,731 (GRCm39) |
R114L |
probably benign |
Het |
Vmn1r172 |
A |
T |
7: 23,359,582 (GRCm39) |
I156L |
possibly damaging |
Het |
Vmn1r238 |
A |
G |
18: 3,122,623 (GRCm39) |
Y264H |
possibly damaging |
Het |
Vmn2r26 |
T |
A |
6: 124,016,727 (GRCm39) |
M397K |
probably benign |
Het |
Vmn2r73 |
T |
C |
7: 85,522,075 (GRCm39) |
N88S |
probably benign |
Het |
Vps13a |
T |
C |
19: 16,731,662 (GRCm39) |
N150S |
probably damaging |
Het |
Vps35 |
A |
T |
8: 86,014,350 (GRCm39) |
Y100N |
probably damaging |
Het |
Vps8 |
A |
C |
16: 21,276,171 (GRCm39) |
I235L |
probably damaging |
Het |
Yipf2 |
T |
A |
9: 21,501,657 (GRCm39) |
H157L |
probably damaging |
Het |
Zfp354a |
A |
T |
11: 50,961,073 (GRCm39) |
H426L |
probably damaging |
Het |
Zfp503 |
G |
T |
14: 22,035,553 (GRCm39) |
S454R |
possibly damaging |
Het |
Zfp619 |
C |
T |
7: 39,184,824 (GRCm39) |
R285C |
probably benign |
Het |
|
Other mutations in Col27a1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01305:Col27a1
|
APN |
4 |
63,218,978 (GRCm39) |
splice site |
probably benign |
|
IGL01461:Col27a1
|
APN |
4 |
63,142,480 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01534:Col27a1
|
APN |
4 |
63,144,019 (GRCm39) |
missense |
probably benign |
0.12 |
IGL01738:Col27a1
|
APN |
4 |
63,182,016 (GRCm39) |
splice site |
probably benign |
|
IGL01810:Col27a1
|
APN |
4 |
63,143,868 (GRCm39) |
missense |
probably benign |
0.21 |
IGL02127:Col27a1
|
APN |
4 |
63,143,379 (GRCm39) |
missense |
possibly damaging |
0.60 |
IGL02290:Col27a1
|
APN |
4 |
63,144,163 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02374:Col27a1
|
APN |
4 |
63,211,486 (GRCm39) |
missense |
possibly damaging |
0.86 |
IGL02548:Col27a1
|
APN |
4 |
63,236,492 (GRCm39) |
splice site |
probably benign |
|
IGL02792:Col27a1
|
APN |
4 |
63,233,820 (GRCm39) |
missense |
unknown |
|
IGL02931:Col27a1
|
APN |
4 |
63,249,663 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL03107:Col27a1
|
APN |
4 |
63,242,869 (GRCm39) |
splice site |
probably benign |
|
IGL03121:Col27a1
|
APN |
4 |
63,143,446 (GRCm39) |
missense |
probably benign |
0.26 |
IGL03334:Col27a1
|
APN |
4 |
63,232,959 (GRCm39) |
missense |
probably damaging |
1.00 |
R0005:Col27a1
|
UTSW |
4 |
63,143,637 (GRCm39) |
missense |
probably benign |
0.04 |
R0025:Col27a1
|
UTSW |
4 |
63,194,214 (GRCm39) |
missense |
probably damaging |
1.00 |
R0141:Col27a1
|
UTSW |
4 |
63,183,870 (GRCm39) |
critical splice acceptor site |
probably null |
|
R0196:Col27a1
|
UTSW |
4 |
63,142,503 (GRCm39) |
missense |
probably benign |
0.02 |
R0359:Col27a1
|
UTSW |
4 |
63,232,964 (GRCm39) |
critical splice donor site |
probably null |
|
R0375:Col27a1
|
UTSW |
4 |
63,143,898 (GRCm39) |
missense |
probably benign |
0.23 |
R0432:Col27a1
|
UTSW |
4 |
63,143,848 (GRCm39) |
missense |
possibly damaging |
0.87 |
R0499:Col27a1
|
UTSW |
4 |
63,218,978 (GRCm39) |
splice site |
probably benign |
|
R0786:Col27a1
|
UTSW |
4 |
63,209,815 (GRCm39) |
critical splice donor site |
probably null |
|
R0891:Col27a1
|
UTSW |
4 |
63,223,420 (GRCm39) |
critical splice acceptor site |
probably null |
|
R1239:Col27a1
|
UTSW |
4 |
63,237,152 (GRCm39) |
splice site |
probably benign |
|
R1297:Col27a1
|
UTSW |
4 |
63,183,868 (GRCm39) |
splice site |
probably benign |
|
R1299:Col27a1
|
UTSW |
4 |
63,183,868 (GRCm39) |
splice site |
probably benign |
|
R1322:Col27a1
|
UTSW |
4 |
63,246,803 (GRCm39) |
utr 3 prime |
probably benign |
|
R1342:Col27a1
|
UTSW |
4 |
63,175,351 (GRCm39) |
critical splice donor site |
probably null |
|
R1446:Col27a1
|
UTSW |
4 |
63,143,040 (GRCm39) |
missense |
probably damaging |
1.00 |
R1629:Col27a1
|
UTSW |
4 |
63,248,100 (GRCm39) |
utr 3 prime |
probably benign |
|
R1644:Col27a1
|
UTSW |
4 |
63,246,868 (GRCm39) |
utr 3 prime |
probably benign |
|
R1774:Col27a1
|
UTSW |
4 |
63,143,950 (GRCm39) |
missense |
probably damaging |
1.00 |
R1807:Col27a1
|
UTSW |
4 |
63,249,586 (GRCm39) |
utr 3 prime |
probably benign |
|
R1952:Col27a1
|
UTSW |
4 |
63,202,130 (GRCm39) |
splice site |
probably null |
|
R1957:Col27a1
|
UTSW |
4 |
63,196,031 (GRCm39) |
missense |
probably benign |
0.03 |
R1970:Col27a1
|
UTSW |
4 |
63,191,354 (GRCm39) |
splice site |
probably benign |
|
R2164:Col27a1
|
UTSW |
4 |
63,143,661 (GRCm39) |
missense |
probably benign |
0.21 |
R3774:Col27a1
|
UTSW |
4 |
63,232,963 (GRCm39) |
missense |
probably benign |
0.00 |
R4078:Col27a1
|
UTSW |
4 |
63,142,669 (GRCm39) |
missense |
probably damaging |
1.00 |
R4353:Col27a1
|
UTSW |
4 |
63,143,868 (GRCm39) |
missense |
probably benign |
0.21 |
R4611:Col27a1
|
UTSW |
4 |
63,211,743 (GRCm39) |
missense |
probably damaging |
1.00 |
R4708:Col27a1
|
UTSW |
4 |
63,202,150 (GRCm39) |
missense |
probably benign |
0.01 |
R4884:Col27a1
|
UTSW |
4 |
63,194,197 (GRCm39) |
missense |
possibly damaging |
0.77 |
R5149:Col27a1
|
UTSW |
4 |
63,249,664 (GRCm39) |
utr 3 prime |
probably benign |
|
R5411:Col27a1
|
UTSW |
4 |
63,142,902 (GRCm39) |
missense |
probably damaging |
1.00 |
R5451:Col27a1
|
UTSW |
4 |
63,143,476 (GRCm39) |
missense |
probably damaging |
0.98 |
R5615:Col27a1
|
UTSW |
4 |
63,199,351 (GRCm39) |
missense |
probably damaging |
0.96 |
R5657:Col27a1
|
UTSW |
4 |
63,143,547 (GRCm39) |
missense |
probably damaging |
0.97 |
R5838:Col27a1
|
UTSW |
4 |
63,143,765 (GRCm39) |
missense |
probably damaging |
1.00 |
R6230:Col27a1
|
UTSW |
4 |
63,142,519 (GRCm39) |
missense |
probably damaging |
1.00 |
R6326:Col27a1
|
UTSW |
4 |
63,242,678 (GRCm39) |
utr 3 prime |
probably benign |
|
R6457:Col27a1
|
UTSW |
4 |
63,237,701 (GRCm39) |
utr 3 prime |
probably benign |
|
R6624:Col27a1
|
UTSW |
4 |
63,143,248 (GRCm39) |
missense |
probably benign |
0.00 |
R6792:Col27a1
|
UTSW |
4 |
63,235,740 (GRCm39) |
missense |
unknown |
|
R6848:Col27a1
|
UTSW |
4 |
63,220,608 (GRCm39) |
missense |
probably benign |
|
R6962:Col27a1
|
UTSW |
4 |
63,237,738 (GRCm39) |
utr 3 prime |
probably benign |
|
R7053:Col27a1
|
UTSW |
4 |
63,251,404 (GRCm39) |
utr 3 prime |
probably benign |
|
R7586:Col27a1
|
UTSW |
4 |
63,143,278 (GRCm39) |
missense |
probably damaging |
1.00 |
R7698:Col27a1
|
UTSW |
4 |
63,143,955 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7714:Col27a1
|
UTSW |
4 |
63,242,723 (GRCm39) |
critical splice donor site |
probably null |
|
R7916:Col27a1
|
UTSW |
4 |
63,142,789 (GRCm39) |
missense |
probably damaging |
1.00 |
R7943:Col27a1
|
UTSW |
4 |
63,236,520 (GRCm39) |
missense |
unknown |
|
R7988:Col27a1
|
UTSW |
4 |
63,249,559 (GRCm39) |
missense |
unknown |
|
R8136:Col27a1
|
UTSW |
4 |
63,202,190 (GRCm39) |
missense |
probably benign |
0.06 |
R8243:Col27a1
|
UTSW |
4 |
63,144,120 (GRCm39) |
missense |
probably damaging |
1.00 |
R8245:Col27a1
|
UTSW |
4 |
63,144,040 (GRCm39) |
missense |
probably damaging |
0.97 |
R8350:Col27a1
|
UTSW |
4 |
63,248,134 (GRCm39) |
missense |
unknown |
|
R8437:Col27a1
|
UTSW |
4 |
63,237,701 (GRCm39) |
utr 3 prime |
probably benign |
|
R8450:Col27a1
|
UTSW |
4 |
63,248,134 (GRCm39) |
missense |
unknown |
|
R8542:Col27a1
|
UTSW |
4 |
63,239,662 (GRCm39) |
splice site |
probably null |
|
R8745:Col27a1
|
UTSW |
4 |
63,144,153 (GRCm39) |
missense |
probably benign |
0.02 |
R8821:Col27a1
|
UTSW |
4 |
63,143,148 (GRCm39) |
missense |
probably benign |
0.04 |
R8951:Col27a1
|
UTSW |
4 |
63,191,311 (GRCm39) |
missense |
possibly damaging |
0.92 |
R8970:Col27a1
|
UTSW |
4 |
63,134,105 (GRCm39) |
missense |
unknown |
|
R9115:Col27a1
|
UTSW |
4 |
63,231,974 (GRCm39) |
missense |
unknown |
|
R9185:Col27a1
|
UTSW |
4 |
63,246,887 (GRCm39) |
missense |
unknown |
|
R9291:Col27a1
|
UTSW |
4 |
63,142,539 (GRCm39) |
missense |
probably damaging |
0.99 |
R9404:Col27a1
|
UTSW |
4 |
63,194,178 (GRCm39) |
missense |
possibly damaging |
0.93 |
Z1176:Col27a1
|
UTSW |
4 |
63,144,025 (GRCm39) |
missense |
probably damaging |
0.99 |
Z1177:Col27a1
|
UTSW |
4 |
63,199,526 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCACATCAGGGGTAATACGTGG -3'
(R):5'- TAGACAGCCCCAGTGTAGAG -3'
Sequencing Primer
(F):5'- GATGTGCCTGCATAGCCCTAG -3'
(R):5'- CCAGTGTAGAGCAGGGTGC -3'
|
Posted On |
2019-06-26 |