Incidental Mutation 'R7219:Trpm1'
| ID |
561658 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Trpm1
|
| Ensembl Gene |
ENSMUSG00000030523 |
| Gene Name |
transient receptor potential cation channel, subfamily M, member 1 |
| Synonyms |
Mlsn1, melastatin, 4732499L03Rik, LTRPC1 |
| MMRRC Submission |
045291-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R7219 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
63803583-63919523 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 63854333 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Asparagine
at position 285
(I285N)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000082318
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085222]
[ENSMUST00000177102]
[ENSMUST00000205348]
[ENSMUST00000205690]
[ENSMUST00000205731]
[ENSMUST00000206049]
[ENSMUST00000206107]
[ENSMUST00000206263]
[ENSMUST00000206277]
[ENSMUST00000206314]
[ENSMUST00000206706]
|
| AlphaFold |
Q2TV84 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000085222
AA Change: I285N
PolyPhen 2
Score 0.675 (Sensitivity: 0.86; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000082318
Gene: ENSMUSG00000030523
AA Change: I285N
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
|
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
|
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
|
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
|
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
|
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
|
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
|
transmembrane domain
|
876 |
895 |
N/A |
INTRINSIC |
|
Pfam:Ion_trans
|
907 |
1120 |
6e-16 |
PFAM |
|
transmembrane domain
|
1150 |
1167 |
N/A |
INTRINSIC |
|
low complexity region
|
1216 |
1225 |
N/A |
INTRINSIC |
|
PDB:3E7K|H
|
1228 |
1279 |
1e-7 |
PDB |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000177102
AA Change: I169N
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000134947
Gene: ENSMUSG00000030523
AA Change: I169N
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
67 |
79 |
N/A |
INTRINSIC |
|
low complexity region
|
173 |
191 |
N/A |
INTRINSIC |
|
low complexity region
|
340 |
375 |
N/A |
INTRINSIC |
|
Blast:ANK
|
389 |
417 |
1e-5 |
BLAST |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000205348
AA Change: I285N
PolyPhen 2
Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000205684
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000205690
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000205731
AA Change: I169N
PolyPhen 2
Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000206049
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000206107
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000206263
AA Change: I169N
PolyPhen 2
Score 0.675 (Sensitivity: 0.86; Specificity: 0.92)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000206277
AA Change: I285N
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000206314
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000206706
AA Change: I152N
PolyPhen 2
Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)
|
| Meta Mutation Damage Score |
0.5119 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.0%
|
| Validation Efficiency |
97% (77/79) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the transient receptor potential melastatin subfamily of transient receptor potential ion channels. The encoded protein is a calcium permeable cation channel that is expressed in melanocytes and may play a role in melanin synthesis. Specific mutations in this gene are the cause autosomal recessive complete congenital stationary night blindness-1C. The expression of this protein is inversely correlated with melanoma aggressiveness and as such it is used as a prognostic marker for melanoma metastasis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011]
PHENOTYPE: Homozygous mutants have defects in rod and cone electrophysiology affecting the photoresponses. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 79 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930562C15Rik |
T |
C |
16: 4,667,508 (GRCm39) |
S300P |
unknown |
Het |
| Abhd17a |
T |
A |
10: 80,420,008 (GRCm39) |
K226* |
probably null |
Het |
| Alkbh7 |
T |
A |
17: 57,305,508 (GRCm39) |
H108Q |
probably damaging |
Het |
| Ankrd44 |
A |
C |
1: 54,806,069 (GRCm39) |
H112Q |
probably damaging |
Het |
| Capn3 |
A |
G |
2: 120,333,935 (GRCm39) |
E790G |
probably damaging |
Het |
| Cd47 |
C |
A |
16: 49,728,440 (GRCm39) |
N330K |
possibly damaging |
Het |
| Cd55 |
A |
G |
1: 130,390,343 (GRCm39) |
S22P |
possibly damaging |
Het |
| Cdc25a |
A |
G |
9: 109,718,154 (GRCm39) |
I373V |
probably damaging |
Het |
| Cfap43 |
T |
C |
19: 47,779,912 (GRCm39) |
I514V |
probably benign |
Het |
| Cfap73 |
A |
T |
5: 120,768,200 (GRCm39) |
M186K |
probably benign |
Het |
| Chd9 |
A |
G |
8: 91,728,394 (GRCm39) |
D1270G |
unknown |
Het |
| Ciita |
A |
G |
16: 10,330,121 (GRCm39) |
T802A |
probably benign |
Het |
| Dlgap2 |
A |
G |
8: 14,793,296 (GRCm39) |
E430G |
probably benign |
Het |
| Dlx1 |
C |
A |
2: 71,360,513 (GRCm39) |
S59* |
probably null |
Het |
| Dnaaf3 |
T |
C |
7: 4,531,076 (GRCm39) |
N119S |
probably damaging |
Het |
| Dnah11 |
T |
G |
12: 118,004,830 (GRCm39) |
I2164L |
possibly damaging |
Het |
| Dnah11 |
T |
C |
12: 118,090,624 (GRCm39) |
K1079R |
probably benign |
Het |
| Dnah12 |
C |
T |
14: 26,576,837 (GRCm39) |
T3029I |
probably damaging |
Het |
| Dppa3 |
A |
T |
6: 122,606,918 (GRCm39) |
Y136F |
probably damaging |
Het |
| Enox1 |
T |
A |
14: 77,958,284 (GRCm39) |
M611K |
probably benign |
Het |
| Fam149a |
A |
T |
8: 45,803,600 (GRCm39) |
I378N |
possibly damaging |
Het |
| Farp2 |
T |
C |
1: 93,488,040 (GRCm39) |
F89S |
probably damaging |
Het |
| Fbn2 |
C |
T |
18: 58,186,099 (GRCm39) |
V1750M |
probably benign |
Het |
| Frs3 |
A |
G |
17: 48,013,620 (GRCm39) |
T181A |
probably damaging |
Het |
| Heatr4 |
T |
A |
12: 84,004,644 (GRCm39) |
I726F |
possibly damaging |
Het |
| Ighg1 |
T |
G |
12: 113,290,216 (GRCm39) |
E375A |
|
Het |
| Ikzf4 |
G |
T |
10: 128,470,252 (GRCm39) |
Q476K |
possibly damaging |
Het |
| Kcnh1 |
G |
T |
1: 192,187,945 (GRCm39) |
C829F |
probably benign |
Het |
| Krtap19-4 |
T |
C |
16: 88,681,797 (GRCm39) |
Y53C |
unknown |
Het |
| Loricrin |
C |
A |
3: 91,988,705 (GRCm39) |
G194C |
unknown |
Het |
| Lrp1 |
A |
C |
10: 127,393,097 (GRCm39) |
D2720E |
probably benign |
Het |
| Lrp4 |
A |
G |
2: 91,322,368 (GRCm39) |
Y1068C |
probably damaging |
Het |
| Mbnl1 |
A |
G |
3: 60,511,244 (GRCm39) |
N67D |
probably benign |
Het |
| Mrpl21 |
A |
G |
19: 3,336,998 (GRCm39) |
E123G |
probably benign |
Het |
| Mst1 |
A |
T |
9: 107,958,485 (GRCm39) |
D65V |
probably damaging |
Het |
| Myo15b |
T |
A |
11: 115,767,921 (GRCm39) |
|
probably null |
Het |
| Myo5a |
A |
G |
9: 75,028,052 (GRCm39) |
Y79C |
probably damaging |
Het |
| Oas1c |
A |
T |
5: 120,940,957 (GRCm39) |
W279R |
probably damaging |
Het |
| Or4f4-ps1 |
A |
T |
2: 111,330,532 (GRCm39) |
M312L |
probably benign |
Het |
| Or4k77 |
A |
T |
2: 111,199,882 (GRCm39) |
I302L |
probably benign |
Het |
| Or51f5 |
A |
G |
7: 102,430,913 (GRCm39) |
I77V |
probably benign |
Het |
| Pcdh9 |
C |
T |
14: 93,253,216 (GRCm39) |
G1149D |
possibly damaging |
Het |
| Pcid2 |
G |
A |
8: 13,129,907 (GRCm39) |
T283I |
probably benign |
Het |
| Pdhx |
A |
G |
2: 102,858,760 (GRCm39) |
V348A |
probably benign |
Het |
| Pi16 |
C |
A |
17: 29,538,208 (GRCm39) |
P7Q |
possibly damaging |
Het |
| Psmb3 |
T |
A |
11: 97,602,023 (GRCm39) |
M131K |
probably null |
Het |
| Raph1 |
A |
G |
1: 60,542,032 (GRCm39) |
Y309H |
unknown |
Het |
| Rasgrf1 |
A |
G |
9: 89,866,341 (GRCm39) |
N593S |
probably damaging |
Het |
| Rbm38 |
A |
C |
2: 172,863,990 (GRCm39) |
E53A |
possibly damaging |
Het |
| Rufy3 |
A |
G |
5: 88,797,715 (GRCm39) |
T631A |
probably benign |
Het |
| Sbno1 |
A |
T |
5: 124,543,722 (GRCm39) |
D272E |
probably benign |
Het |
| Scamp1 |
T |
A |
13: 94,361,415 (GRCm39) |
Y207F |
probably damaging |
Het |
| Scn8a |
T |
A |
15: 100,866,984 (GRCm39) |
S263R |
probably damaging |
Het |
| Setbp1 |
T |
G |
18: 78,798,960 (GRCm39) |
T1407P |
probably damaging |
Het |
| Skor2 |
T |
C |
18: 76,948,096 (GRCm39) |
L606P |
possibly damaging |
Het |
| Slc35f6 |
A |
G |
5: 30,814,796 (GRCm39) |
N241S |
probably benign |
Het |
| Slc36a2 |
T |
G |
11: 55,059,744 (GRCm39) |
D247A |
probably benign |
Het |
| Smim10l1 |
T |
A |
6: 133,084,895 (GRCm39) |
F87L |
unknown |
Het |
| Son |
T |
C |
16: 91,461,889 (GRCm39) |
S2265P |
unknown |
Het |
| Spta1 |
A |
G |
1: 174,050,203 (GRCm39) |
N1748D |
probably damaging |
Het |
| Sptbn2 |
A |
G |
19: 4,774,201 (GRCm39) |
D84G |
probably damaging |
Het |
| Tasor2 |
T |
A |
13: 3,640,521 (GRCm39) |
L205F |
probably damaging |
Het |
| Tbc1d24 |
G |
A |
17: 24,404,266 (GRCm39) |
R293C |
probably damaging |
Het |
| Tex15 |
A |
G |
8: 34,036,268 (GRCm39) |
T65A |
probably benign |
Het |
| Thyn1 |
A |
G |
9: 26,916,506 (GRCm39) |
Y97C |
probably damaging |
Het |
| Tmem64 |
T |
C |
4: 15,266,700 (GRCm39) |
L250P |
probably damaging |
Het |
| Tnfrsf9 |
A |
T |
4: 151,019,991 (GRCm39) |
K217N |
probably damaging |
Het |
| Tnxb |
A |
G |
17: 34,898,039 (GRCm39) |
T896A |
probably benign |
Het |
| Try5 |
T |
A |
6: 41,288,637 (GRCm39) |
D194V |
probably damaging |
Het |
| U2surp |
G |
A |
9: 95,372,215 (GRCm39) |
R316* |
probably null |
Het |
| Ubr2 |
G |
T |
17: 47,246,360 (GRCm39) |
S1618* |
probably null |
Het |
| Ugp2 |
T |
C |
11: 21,273,271 (GRCm39) |
I449M |
probably damaging |
Het |
| Umodl1 |
A |
G |
17: 31,201,236 (GRCm39) |
|
probably null |
Het |
| Vmn2r31 |
C |
T |
7: 7,390,105 (GRCm39) |
V538I |
probably benign |
Het |
| Vmn2r31 |
A |
T |
7: 7,397,397 (GRCm39) |
M287K |
probably damaging |
Het |
| Wwc2 |
A |
G |
8: 48,311,919 (GRCm39) |
V748A |
unknown |
Het |
| Zfp800 |
A |
C |
6: 28,243,662 (GRCm39) |
H434Q |
probably benign |
Het |
| Zfp869 |
A |
G |
8: 70,159,356 (GRCm39) |
C406R |
probably damaging |
Het |
| Zhx1 |
A |
G |
15: 57,917,733 (GRCm39) |
V171A |
probably benign |
Het |
|
| Other mutations in Trpm1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00093:Trpm1
|
APN |
7 |
63,893,198 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00465:Trpm1
|
APN |
7 |
63,897,215 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL01118:Trpm1
|
APN |
7 |
63,885,572 (GRCm39) |
missense |
probably benign |
0.24 |
|
IGL01148:Trpm1
|
APN |
7 |
63,893,312 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01303:Trpm1
|
APN |
7 |
63,860,578 (GRCm39) |
critical splice acceptor site |
probably benign |
0.00 |
|
IGL01432:Trpm1
|
APN |
7 |
63,884,767 (GRCm39) |
missense |
probably benign |
0.18 |
|
IGL01433:Trpm1
|
APN |
7 |
63,854,276 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01506:Trpm1
|
APN |
7 |
63,893,329 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01626:Trpm1
|
APN |
7 |
63,918,637 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01640:Trpm1
|
APN |
7 |
63,876,645 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01899:Trpm1
|
APN |
7 |
63,884,742 (GRCm39) |
missense |
probably benign |
0.24 |
|
IGL01959:Trpm1
|
APN |
7 |
63,858,723 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL02210:Trpm1
|
APN |
7 |
63,860,613 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02268:Trpm1
|
APN |
7 |
63,867,362 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL02331:Trpm1
|
APN |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
|
IGL02334:Trpm1
|
APN |
7 |
63,895,690 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
IGL02407:Trpm1
|
APN |
7 |
63,868,869 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02425:Trpm1
|
APN |
7 |
63,890,175 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL02485:Trpm1
|
APN |
7 |
63,918,862 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
IGL02635:Trpm1
|
APN |
7 |
63,848,972 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02640:Trpm1
|
APN |
7 |
63,868,881 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02827:Trpm1
|
APN |
7 |
63,868,908 (GRCm39) |
missense |
probably null |
1.00 |
|
PIT4458001:Trpm1
|
UTSW |
7 |
63,918,309 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
PIT4544001:Trpm1
|
UTSW |
7 |
63,848,998 (GRCm39) |
intron |
probably benign |
|
|
R0012:Trpm1
|
UTSW |
7 |
63,918,339 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R0014:Trpm1
|
UTSW |
7 |
63,897,970 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0056:Trpm1
|
UTSW |
7 |
63,893,334 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0445:Trpm1
|
UTSW |
7 |
63,894,590 (GRCm39) |
unclassified |
probably benign |
|
|
R0463:Trpm1
|
UTSW |
7 |
63,870,002 (GRCm39) |
missense |
probably benign |
0.05 |
|
R0469:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0510:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1301:Trpm1
|
UTSW |
7 |
63,852,801 (GRCm39) |
splice site |
probably null |
|
|
R1397:Trpm1
|
UTSW |
7 |
63,867,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1588:Trpm1
|
UTSW |
7 |
63,873,565 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R1618:Trpm1
|
UTSW |
7 |
63,890,283 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1724:Trpm1
|
UTSW |
7 |
63,885,569 (GRCm39) |
nonsense |
probably null |
|
|
R1827:Trpm1
|
UTSW |
7 |
63,884,755 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1829:Trpm1
|
UTSW |
7 |
63,876,530 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1835:Trpm1
|
UTSW |
7 |
63,880,016 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1864:Trpm1
|
UTSW |
7 |
63,917,764 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1895:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1946:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1959:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1960:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1980:Trpm1
|
UTSW |
7 |
63,858,182 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R1989:Trpm1
|
UTSW |
7 |
63,858,780 (GRCm39) |
intron |
probably null |
|
|
R2054:Trpm1
|
UTSW |
7 |
63,890,303 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R2156:Trpm1
|
UTSW |
7 |
63,884,736 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2251:Trpm1
|
UTSW |
7 |
63,859,724 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3051:Trpm1
|
UTSW |
7 |
63,918,849 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3148:Trpm1
|
UTSW |
7 |
63,884,760 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3195:Trpm1
|
UTSW |
7 |
63,849,061 (GRCm39) |
nonsense |
probably null |
|
|
R3615:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3616:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3623:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3624:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3721:Trpm1
|
UTSW |
7 |
63,867,475 (GRCm39) |
intron |
probably benign |
|
|
R3822:Trpm1
|
UTSW |
7 |
63,867,451 (GRCm39) |
intron |
probably benign |
|
|
R4441:Trpm1
|
UTSW |
7 |
63,851,666 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4490:Trpm1
|
UTSW |
7 |
63,858,660 (GRCm39) |
nonsense |
probably null |
|
|
R4666:Trpm1
|
UTSW |
7 |
63,852,782 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4701:Trpm1
|
UTSW |
7 |
63,893,248 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4781:Trpm1
|
UTSW |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
|
R4811:Trpm1
|
UTSW |
7 |
63,858,054 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5017:Trpm1
|
UTSW |
7 |
63,894,580 (GRCm39) |
unclassified |
probably benign |
|
|
R5030:Trpm1
|
UTSW |
7 |
63,885,579 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5195:Trpm1
|
UTSW |
7 |
63,887,441 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R5238:Trpm1
|
UTSW |
7 |
63,918,702 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5304:Trpm1
|
UTSW |
7 |
63,858,694 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5575:Trpm1
|
UTSW |
7 |
63,870,018 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5613:Trpm1
|
UTSW |
7 |
63,858,159 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5855:Trpm1
|
UTSW |
7 |
63,918,710 (GRCm39) |
nonsense |
probably null |
|
|
R5947:Trpm1
|
UTSW |
7 |
63,873,547 (GRCm39) |
missense |
probably benign |
0.07 |
|
R5988:Trpm1
|
UTSW |
7 |
63,876,553 (GRCm39) |
missense |
probably benign |
0.16 |
|
R6054:Trpm1
|
UTSW |
7 |
63,918,450 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6088:Trpm1
|
UTSW |
7 |
63,917,724 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6259:Trpm1
|
UTSW |
7 |
63,918,226 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R6379:Trpm1
|
UTSW |
7 |
63,848,942 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6380:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.24 |
|
R6429:Trpm1
|
UTSW |
7 |
63,918,252 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6600:Trpm1
|
UTSW |
7 |
63,803,781 (GRCm39) |
start codon destroyed |
probably null |
0.56 |
|
R6622:Trpm1
|
UTSW |
7 |
63,890,343 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R6939:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6944:Trpm1
|
UTSW |
7 |
63,893,181 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7025:Trpm1
|
UTSW |
7 |
63,876,462 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R7112:Trpm1
|
UTSW |
7 |
63,885,593 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R7168:Trpm1
|
UTSW |
7 |
63,918,445 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7224:Trpm1
|
UTSW |
7 |
63,868,854 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R7285:Trpm1
|
UTSW |
7 |
63,859,729 (GRCm39) |
nonsense |
probably null |
|
|
R7367:Trpm1
|
UTSW |
7 |
63,918,549 (GRCm39) |
missense |
probably benign |
0.06 |
|
R7449:Trpm1
|
UTSW |
7 |
63,858,723 (GRCm39) |
missense |
probably benign |
0.14 |
|
R7466:Trpm1
|
UTSW |
7 |
63,890,330 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7498:Trpm1
|
UTSW |
7 |
63,858,657 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R7581:Trpm1
|
UTSW |
7 |
63,854,303 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7776:Trpm1
|
UTSW |
7 |
63,897,939 (GRCm39) |
missense |
probably benign |
0.04 |
|
R8062:Trpm1
|
UTSW |
7 |
63,851,689 (GRCm39) |
missense |
probably benign |
0.18 |
|
R8069:Trpm1
|
UTSW |
7 |
63,858,718 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R8157:Trpm1
|
UTSW |
7 |
63,849,017 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8219:Trpm1
|
UTSW |
7 |
63,851,699 (GRCm39) |
missense |
probably benign |
0.35 |
|
R8258:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8259:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8320:Trpm1
|
UTSW |
7 |
63,918,541 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R8536:Trpm1
|
UTSW |
7 |
63,897,155 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8544:Trpm1
|
UTSW |
7 |
63,874,356 (GRCm39) |
splice site |
probably null |
|
|
R8813:Trpm1
|
UTSW |
7 |
63,851,756 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R8912:Trpm1
|
UTSW |
7 |
63,918,628 (GRCm39) |
missense |
probably benign |
0.06 |
|
R8954:Trpm1
|
UTSW |
7 |
63,858,089 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9139:Trpm1
|
UTSW |
7 |
63,848,943 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9205:Trpm1
|
UTSW |
7 |
63,890,319 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R9258:Trpm1
|
UTSW |
7 |
63,884,713 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9283:Trpm1
|
UTSW |
7 |
63,873,623 (GRCm39) |
missense |
probably benign |
0.18 |
|
R9394:Trpm1
|
UTSW |
7 |
63,918,480 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9430:Trpm1
|
UTSW |
7 |
63,873,446 (GRCm39) |
missense |
probably benign |
0.38 |
|
R9537:Trpm1
|
UTSW |
7 |
63,803,616 (GRCm39) |
unclassified |
probably benign |
|
|
R9616:Trpm1
|
UTSW |
7 |
63,858,132 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9774:Trpm1
|
UTSW |
7 |
63,898,041 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
X0026:Trpm1
|
UTSW |
7 |
63,918,658 (GRCm39) |
missense |
probably benign |
0.05 |
|
Z1176:Trpm1
|
UTSW |
7 |
63,854,342 (GRCm39) |
critical splice donor site |
probably null |
|
|
Z1176:Trpm1
|
UTSW |
7 |
63,852,879 (GRCm39) |
critical splice donor site |
probably null |
|
|
Z1177:Trpm1
|
UTSW |
7 |
63,867,439 (GRCm39) |
missense |
unknown |
|
|
| Predicted Primers |
PCR Primer
(F):5'- GCTTTCTGTCAGGTAACAAGAGTC -3'
(R):5'- TAGTGCAAGGGTAAGTCTCAGAC -3'
Sequencing Primer
(F):5'- CTGTCAGGTAACAAGAGTCTATCAG -3'
(R):5'- GTCTCAGACCAAATTGTGAACCTGG -3'
|
| Posted On |
2019-06-26 |
Incidental Mutation