Incidental Mutation 'R7219:Cfap43'
ID 561707
Institutional Source Beutler Lab
Gene Symbol Cfap43
Ensembl Gene ENSMUSG00000044948
Gene Name cilia and flagella associated protein 43
Synonyms D19Ertd652e, 4632415N18Rik, Wdr96, 4930428C11Rik, 4930463G05Rik
MMRRC Submission 045291-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.117) question?
Stock # R7219 (G1)
Quality Score 225.009
Status Validated
Chromosome 19
Chromosomal Location 47723706-47825893 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 47779912 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 514 (I514V)
Ref Sequence ENSEMBL: ENSMUSP00000125007 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000160247]
AlphaFold E9Q7R9
Predicted Effect probably benign
Transcript: ENSMUST00000160247
AA Change: I514V

PolyPhen 2 Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)
SMART Domains Protein: ENSMUSP00000125007
Gene: ENSMUSG00000044948
AA Change: I514V

DomainStartEndE-ValueType
low complexity region 12 36 N/A INTRINSIC
Blast:WD40 70 111 6e-7 BLAST
Blast:WD40 115 156 1e-5 BLAST
Blast:WD40 162 197 8e-10 BLAST
WD40 349 388 1.07e0 SMART
Blast:WD40 392 432 3e-13 BLAST
WD40 435 473 3.96e1 SMART
WD40 479 518 3.82e1 SMART
Blast:WD40 638 683 8e-17 BLAST
Blast:WD40 689 728 1e-17 BLAST
low complexity region 766 781 N/A INTRINSIC
coiled coil region 855 886 N/A INTRINSIC
coiled coil region 925 961 N/A INTRINSIC
low complexity region 971 981 N/A INTRINSIC
coiled coil region 1170 1224 N/A INTRINSIC
low complexity region 1248 1259 N/A INTRINSIC
low complexity region 1268 1279 N/A INTRINSIC
low complexity region 1524 1529 N/A INTRINSIC
coiled coil region 1652 1671 N/A INTRINSIC
Meta Mutation Damage Score 0.0846 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 97% (77/79)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the cilia- and flagella-associated protein family. [provided by RefSeq, Sep 2016]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete male sterility, asthenozoospermia, and teratozoospermia characterized by short, thick, and coiled flagella and sperm axonemal defects. [provided by MGI curators]
Allele List at MGI

All alleles(4) : Gene trapped(4)

Other mutations in this stock
Total: 79 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930562C15Rik T C 16: 4,667,508 (GRCm39) S300P unknown Het
Abhd17a T A 10: 80,420,008 (GRCm39) K226* probably null Het
Alkbh7 T A 17: 57,305,508 (GRCm39) H108Q probably damaging Het
Ankrd44 A C 1: 54,806,069 (GRCm39) H112Q probably damaging Het
Capn3 A G 2: 120,333,935 (GRCm39) E790G probably damaging Het
Cd47 C A 16: 49,728,440 (GRCm39) N330K possibly damaging Het
Cd55 A G 1: 130,390,343 (GRCm39) S22P possibly damaging Het
Cdc25a A G 9: 109,718,154 (GRCm39) I373V probably damaging Het
Cfap73 A T 5: 120,768,200 (GRCm39) M186K probably benign Het
Chd9 A G 8: 91,728,394 (GRCm39) D1270G unknown Het
Ciita A G 16: 10,330,121 (GRCm39) T802A probably benign Het
Dlgap2 A G 8: 14,793,296 (GRCm39) E430G probably benign Het
Dlx1 C A 2: 71,360,513 (GRCm39) S59* probably null Het
Dnaaf3 T C 7: 4,531,076 (GRCm39) N119S probably damaging Het
Dnah11 T G 12: 118,004,830 (GRCm39) I2164L possibly damaging Het
Dnah11 T C 12: 118,090,624 (GRCm39) K1079R probably benign Het
Dnah12 C T 14: 26,576,837 (GRCm39) T3029I probably damaging Het
Dppa3 A T 6: 122,606,918 (GRCm39) Y136F probably damaging Het
Enox1 T A 14: 77,958,284 (GRCm39) M611K probably benign Het
Fam149a A T 8: 45,803,600 (GRCm39) I378N possibly damaging Het
Farp2 T C 1: 93,488,040 (GRCm39) F89S probably damaging Het
Fbn2 C T 18: 58,186,099 (GRCm39) V1750M probably benign Het
Frs3 A G 17: 48,013,620 (GRCm39) T181A probably damaging Het
Heatr4 T A 12: 84,004,644 (GRCm39) I726F possibly damaging Het
Ighg1 T G 12: 113,290,216 (GRCm39) E375A Het
Ikzf4 G T 10: 128,470,252 (GRCm39) Q476K possibly damaging Het
Kcnh1 G T 1: 192,187,945 (GRCm39) C829F probably benign Het
Krtap19-4 T C 16: 88,681,797 (GRCm39) Y53C unknown Het
Loricrin C A 3: 91,988,705 (GRCm39) G194C unknown Het
Lrp1 A C 10: 127,393,097 (GRCm39) D2720E probably benign Het
Lrp4 A G 2: 91,322,368 (GRCm39) Y1068C probably damaging Het
Mbnl1 A G 3: 60,511,244 (GRCm39) N67D probably benign Het
Mrpl21 A G 19: 3,336,998 (GRCm39) E123G probably benign Het
Mst1 A T 9: 107,958,485 (GRCm39) D65V probably damaging Het
Myo15b T A 11: 115,767,921 (GRCm39) probably null Het
Myo5a A G 9: 75,028,052 (GRCm39) Y79C probably damaging Het
Oas1c A T 5: 120,940,957 (GRCm39) W279R probably damaging Het
Or4f4-ps1 A T 2: 111,330,532 (GRCm39) M312L probably benign Het
Or4k77 A T 2: 111,199,882 (GRCm39) I302L probably benign Het
Or51f5 A G 7: 102,430,913 (GRCm39) I77V probably benign Het
Pcdh9 C T 14: 93,253,216 (GRCm39) G1149D possibly damaging Het
Pcid2 G A 8: 13,129,907 (GRCm39) T283I probably benign Het
Pdhx A G 2: 102,858,760 (GRCm39) V348A probably benign Het
Pi16 C A 17: 29,538,208 (GRCm39) P7Q possibly damaging Het
Psmb3 T A 11: 97,602,023 (GRCm39) M131K probably null Het
Raph1 A G 1: 60,542,032 (GRCm39) Y309H unknown Het
Rasgrf1 A G 9: 89,866,341 (GRCm39) N593S probably damaging Het
Rbm38 A C 2: 172,863,990 (GRCm39) E53A possibly damaging Het
Rufy3 A G 5: 88,797,715 (GRCm39) T631A probably benign Het
Sbno1 A T 5: 124,543,722 (GRCm39) D272E probably benign Het
Scamp1 T A 13: 94,361,415 (GRCm39) Y207F probably damaging Het
Scn8a T A 15: 100,866,984 (GRCm39) S263R probably damaging Het
Setbp1 T G 18: 78,798,960 (GRCm39) T1407P probably damaging Het
Skor2 T C 18: 76,948,096 (GRCm39) L606P possibly damaging Het
Slc35f6 A G 5: 30,814,796 (GRCm39) N241S probably benign Het
Slc36a2 T G 11: 55,059,744 (GRCm39) D247A probably benign Het
Smim10l1 T A 6: 133,084,895 (GRCm39) F87L unknown Het
Son T C 16: 91,461,889 (GRCm39) S2265P unknown Het
Spta1 A G 1: 174,050,203 (GRCm39) N1748D probably damaging Het
Sptbn2 A G 19: 4,774,201 (GRCm39) D84G probably damaging Het
Tasor2 T A 13: 3,640,521 (GRCm39) L205F probably damaging Het
Tbc1d24 G A 17: 24,404,266 (GRCm39) R293C probably damaging Het
Tex15 A G 8: 34,036,268 (GRCm39) T65A probably benign Het
Thyn1 A G 9: 26,916,506 (GRCm39) Y97C probably damaging Het
Tmem64 T C 4: 15,266,700 (GRCm39) L250P probably damaging Het
Tnfrsf9 A T 4: 151,019,991 (GRCm39) K217N probably damaging Het
Tnxb A G 17: 34,898,039 (GRCm39) T896A probably benign Het
Trpm1 T A 7: 63,854,333 (GRCm39) I285N possibly damaging Het
Try5 T A 6: 41,288,637 (GRCm39) D194V probably damaging Het
U2surp G A 9: 95,372,215 (GRCm39) R316* probably null Het
Ubr2 G T 17: 47,246,360 (GRCm39) S1618* probably null Het
Ugp2 T C 11: 21,273,271 (GRCm39) I449M probably damaging Het
Umodl1 A G 17: 31,201,236 (GRCm39) probably null Het
Vmn2r31 C T 7: 7,390,105 (GRCm39) V538I probably benign Het
Vmn2r31 A T 7: 7,397,397 (GRCm39) M287K probably damaging Het
Wwc2 A G 8: 48,311,919 (GRCm39) V748A unknown Het
Zfp800 A C 6: 28,243,662 (GRCm39) H434Q probably benign Het
Zfp869 A G 8: 70,159,356 (GRCm39) C406R probably damaging Het
Zhx1 A G 15: 57,917,733 (GRCm39) V171A probably benign Het
Other mutations in Cfap43
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00158:Cfap43 APN 19 47,818,914 (GRCm39) missense probably benign 0.08
IGL00325:Cfap43 APN 19 47,811,627 (GRCm39) splice site probably benign
IGL00918:Cfap43 APN 19 47,885,100 (GRCm39) missense probably damaging 1.00
IGL01402:Cfap43 APN 19 47,784,105 (GRCm39) missense probably benign 0.25
IGL01404:Cfap43 APN 19 47,784,105 (GRCm39) missense probably benign 0.25
IGL01656:Cfap43 APN 19 47,740,339 (GRCm39) missense possibly damaging 0.95
IGL01738:Cfap43 APN 19 47,785,624 (GRCm39) missense probably damaging 0.97
IGL02168:Cfap43 APN 19 47,740,362 (GRCm39) splice site probably benign
IGL02225:Cfap43 APN 19 47,800,616 (GRCm39) missense probably benign 0.00
IGL02308:Cfap43 APN 19 47,736,463 (GRCm39) missense probably benign
IGL02354:Cfap43 APN 19 47,885,852 (GRCm39) nonsense probably null
IGL02361:Cfap43 APN 19 47,885,852 (GRCm39) nonsense probably null
IGL03283:Cfap43 APN 19 47,779,851 (GRCm39) splice site probably benign
3-1:Cfap43 UTSW 19 47,740,294 (GRCm39) missense probably benign 0.02
IGL03046:Cfap43 UTSW 19 47,804,302 (GRCm39) missense probably damaging 1.00
PIT4495001:Cfap43 UTSW 19 47,885,741 (GRCm39) missense probably damaging 1.00
R0270:Cfap43 UTSW 19 47,785,642 (GRCm39) splice site probably benign
R0421:Cfap43 UTSW 19 47,824,014 (GRCm39) missense probably benign 0.00
R0433:Cfap43 UTSW 19 47,814,210 (GRCm39) missense probably benign 0.44
R0576:Cfap43 UTSW 19 47,785,579 (GRCm39) missense probably benign 0.00
R0646:Cfap43 UTSW 19 47,752,115 (GRCm39) missense probably benign 0.25
R0740:Cfap43 UTSW 19 47,824,243 (GRCm39) missense possibly damaging 0.95
R0836:Cfap43 UTSW 19 47,804,285 (GRCm39) missense probably benign 0.02
R0899:Cfap43 UTSW 19 47,736,433 (GRCm39) missense possibly damaging 0.93
R1171:Cfap43 UTSW 19 47,824,150 (GRCm39) missense probably benign 0.03
R1271:Cfap43 UTSW 19 47,736,387 (GRCm39) missense probably damaging 0.98
R1271:Cfap43 UTSW 19 47,728,183 (GRCm39) missense probably benign 0.22
R1371:Cfap43 UTSW 19 47,824,045 (GRCm39) missense possibly damaging 0.95
R1469:Cfap43 UTSW 19 47,885,314 (GRCm39) missense probably damaging 1.00
R1541:Cfap43 UTSW 19 47,752,291 (GRCm39) splice site probably null
R1625:Cfap43 UTSW 19 47,739,527 (GRCm39) missense probably damaging 1.00
R1679:Cfap43 UTSW 19 47,761,553 (GRCm39) missense probably benign 0.00
R1690:Cfap43 UTSW 19 47,739,505 (GRCm39) critical splice donor site probably null
R1820:Cfap43 UTSW 19 47,885,655 (GRCm39) missense probably damaging 0.99
R1891:Cfap43 UTSW 19 47,802,380 (GRCm39) missense probably damaging 0.97
R1956:Cfap43 UTSW 19 47,885,649 (GRCm39) missense probably benign 0.19
R1958:Cfap43 UTSW 19 47,885,649 (GRCm39) missense probably benign 0.19
R2110:Cfap43 UTSW 19 47,824,197 (GRCm39) missense probably damaging 1.00
R2118:Cfap43 UTSW 19 47,758,877 (GRCm39) missense probably damaging 1.00
R2290:Cfap43 UTSW 19 47,761,574 (GRCm39) missense probably damaging 0.99
R3691:Cfap43 UTSW 19 47,885,512 (GRCm39) missense probably benign 0.01
R3765:Cfap43 UTSW 19 47,824,014 (GRCm39) missense probably benign 0.01
R3917:Cfap43 UTSW 19 47,886,189 (GRCm39) missense probably benign 0.00
R3924:Cfap43 UTSW 19 47,785,555 (GRCm39) missense probably benign 0.00
R3925:Cfap43 UTSW 19 47,785,555 (GRCm39) missense probably benign 0.00
R3947:Cfap43 UTSW 19 47,754,418 (GRCm39) missense probably benign 0.28
R4256:Cfap43 UTSW 19 47,770,844 (GRCm39) missense probably benign 0.06
R4385:Cfap43 UTSW 19 47,785,568 (GRCm39) missense probably benign 0.28
R4395:Cfap43 UTSW 19 47,740,352 (GRCm39) missense probably benign 0.00
R4405:Cfap43 UTSW 19 47,728,236 (GRCm39) missense possibly damaging 0.57
R4541:Cfap43 UTSW 19 47,736,454 (GRCm39) missense probably benign 0.02
R4583:Cfap43 UTSW 19 47,825,655 (GRCm39) missense probably null 0.99
R4690:Cfap43 UTSW 19 47,736,298 (GRCm39) missense probably benign 0.45
R4852:Cfap43 UTSW 19 47,885,550 (GRCm39) missense possibly damaging 0.87
R5185:Cfap43 UTSW 19 47,768,833 (GRCm39) missense probably benign 0.00
R5192:Cfap43 UTSW 19 47,814,364 (GRCm39) missense probably damaging 1.00
R5196:Cfap43 UTSW 19 47,814,364 (GRCm39) missense probably damaging 1.00
R5197:Cfap43 UTSW 19 47,885,811 (GRCm39) missense probably damaging 1.00
R5205:Cfap43 UTSW 19 47,885,987 (GRCm39) missense possibly damaging 0.76
R5425:Cfap43 UTSW 19 47,885,371 (GRCm39) missense possibly damaging 0.94
R5516:Cfap43 UTSW 19 47,726,648 (GRCm39) splice site probably null
R5644:Cfap43 UTSW 19 47,784,114 (GRCm39) missense possibly damaging 0.66
R5844:Cfap43 UTSW 19 47,784,135 (GRCm39) missense probably benign
R5901:Cfap43 UTSW 19 47,885,538 (GRCm39) missense probably damaging 0.97
R5910:Cfap43 UTSW 19 47,768,710 (GRCm39) missense possibly damaging 0.63
R5920:Cfap43 UTSW 19 47,749,335 (GRCm39) missense possibly damaging 0.88
R5963:Cfap43 UTSW 19 47,734,013 (GRCm39) missense probably benign 0.42
R6817:Cfap43 UTSW 19 47,744,524 (GRCm39) missense possibly damaging 0.88
R6974:Cfap43 UTSW 19 47,773,717 (GRCm39) critical splice donor site probably null
R7270:Cfap43 UTSW 19 47,728,224 (GRCm39) missense possibly damaging 0.86
R7733:Cfap43 UTSW 19 47,886,432 (GRCm39) missense possibly damaging 0.75
R7995:Cfap43 UTSW 19 47,886,462 (GRCm39) missense probably damaging 1.00
R8013:Cfap43 UTSW 19 47,761,548 (GRCm39) missense probably damaging 0.99
R8176:Cfap43 UTSW 19 47,784,114 (GRCm39) missense probably benign 0.00
R8242:Cfap43 UTSW 19 47,885,808 (GRCm39) missense probably damaging 1.00
R8303:Cfap43 UTSW 19 47,754,274 (GRCm39) nonsense probably null
R8333:Cfap43 UTSW 19 47,885,765 (GRCm39) nonsense probably null
R8353:Cfap43 UTSW 19 47,735,086 (GRCm39) missense probably damaging 1.00
R8453:Cfap43 UTSW 19 47,735,086 (GRCm39) missense probably damaging 1.00
R8474:Cfap43 UTSW 19 47,886,363 (GRCm39) missense probably benign 0.32
R8478:Cfap43 UTSW 19 47,764,515 (GRCm39) missense probably benign 0.02
R8676:Cfap43 UTSW 19 47,736,456 (GRCm39) missense possibly damaging 0.95
R8928:Cfap43 UTSW 19 47,804,399 (GRCm39) missense probably benign 0.00
R9190:Cfap43 UTSW 19 47,726,293 (GRCm39) missense possibly damaging 0.65
R9426:Cfap43 UTSW 19 47,814,237 (GRCm39) missense probably damaging 0.99
R9450:Cfap43 UTSW 19 47,886,310 (GRCm39) missense probably benign 0.23
R9491:Cfap43 UTSW 19 47,800,505 (GRCm39) critical splice donor site probably null
R9515:Cfap43 UTSW 19 47,773,814 (GRCm39) missense probably damaging 1.00
R9732:Cfap43 UTSW 19 47,775,446 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ACGGTTGTAAGCCATCTGTTC -3'
(R):5'- ATGATGCCACCCACGCTAAG -3'

Sequencing Primer
(F):5'- TCAATAGTTGATACAAGGGTTGTTG -3'
(R):5'- CACGCTAAGAGTGGCTGG -3'
Posted On 2019-06-26