Incidental Mutation 'R0582:Or52a24'
| ID |
56465 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or52a24
|
| Ensembl Gene |
ENSMUSG00000096516 |
| Gene Name |
olfactory receptor family 52 subfamily A member 24 |
| Synonyms |
GA_x6K02T2PBJ9-6457667-6458617, MOR22-1, Olfr1526-ps1, MOR22-4P, Olfr628, MOR22-4P |
| MMRRC Submission |
038772-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.074)
|
| Stock # |
R0582 (G1)
|
| Quality Score |
193 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
103381135-103382085 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 103381880 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Tyrosine
at position 249
(C249Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151622
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000098193]
[ENSMUST00000218266]
|
| AlphaFold |
K7N6B2 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000098193
AA Change: C249Y
PolyPhen 2
Score 0.819 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000095795
Gene: ENSMUSG00000096516
AA Change: C249Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
313 |
2.3e-106 |
PFAM |
|
Pfam:7tm_1
|
43 |
295 |
1.5e-14 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000218266
AA Change: C249Y
PolyPhen 2
Score 0.819 (Sensitivity: 0.84; Specificity: 0.93)
|
| Meta Mutation Damage Score |
0.3072 |
| Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.9%
- 10x: 97.4%
- 20x: 94.6%
|
| Validation Efficiency |
100% (45/45) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcb5 |
A |
T |
12: 118,904,147 (GRCm39) |
M186K |
probably benign |
Het |
| Afm |
T |
C |
5: 90,672,639 (GRCm39) |
|
probably benign |
Het |
| Arfgef3 |
G |
A |
10: 18,487,038 (GRCm39) |
A1332V |
probably damaging |
Het |
| Atp11a |
T |
C |
8: 12,881,214 (GRCm39) |
S451P |
probably benign |
Het |
| Birc6 |
T |
A |
17: 74,950,332 (GRCm39) |
V3189E |
probably damaging |
Het |
| Ccdc150 |
C |
T |
1: 54,368,670 (GRCm39) |
A626V |
probably benign |
Het |
| Ccdc50 |
G |
A |
16: 27,263,409 (GRCm39) |
|
probably benign |
Het |
| Cntln |
T |
C |
4: 84,802,978 (GRCm39) |
S93P |
probably damaging |
Het |
| Ctnna2 |
C |
A |
6: 77,735,400 (GRCm39) |
V106L |
probably benign |
Het |
| Ctnnal1 |
G |
C |
4: 56,813,228 (GRCm39) |
Q668E |
probably damaging |
Het |
| Cyp1a2 |
G |
A |
9: 57,587,529 (GRCm39) |
|
probably benign |
Het |
| Dnah8 |
A |
G |
17: 30,937,935 (GRCm39) |
D1604G |
probably benign |
Het |
| Dscaml1 |
A |
T |
9: 45,579,562 (GRCm39) |
I370F |
possibly damaging |
Het |
| Duxf4 |
A |
T |
10: 58,071,508 (GRCm39) |
S235R |
probably benign |
Het |
| Ears2 |
T |
C |
7: 121,654,881 (GRCm39) |
E129G |
probably benign |
Het |
| Igsf10 |
T |
C |
3: 59,227,188 (GRCm39) |
I2162V |
probably benign |
Het |
| Ints9 |
C |
T |
14: 65,217,598 (GRCm39) |
P42S |
probably damaging |
Het |
| Ipp |
T |
C |
4: 116,372,664 (GRCm39) |
L231S |
probably damaging |
Het |
| Lyn |
T |
A |
4: 3,743,296 (GRCm39) |
L72Q |
probably damaging |
Het |
| Nfe2l2 |
T |
A |
2: 75,507,112 (GRCm39) |
E329D |
probably damaging |
Het |
| Or2h2c |
G |
C |
17: 37,422,347 (GRCm39) |
L176V |
probably benign |
Het |
| Pdyn |
A |
C |
2: 129,531,658 (GRCm39) |
L44R |
probably damaging |
Het |
| Pkd1l1 |
A |
G |
11: 8,881,699 (GRCm39) |
|
probably benign |
Het |
| Prpf40a |
A |
T |
2: 53,035,704 (GRCm39) |
F695L |
probably damaging |
Het |
| Rnf217 |
A |
G |
10: 31,484,763 (GRCm39) |
Y140H |
possibly damaging |
Het |
| Sema6c |
C |
T |
3: 95,076,508 (GRCm39) |
R265C |
probably damaging |
Het |
| Slc7a8 |
C |
A |
14: 54,995,901 (GRCm39) |
C167F |
probably damaging |
Het |
| Snap47 |
A |
T |
11: 59,319,259 (GRCm39) |
L293* |
probably null |
Het |
| Snx3 |
A |
T |
10: 42,409,276 (GRCm39) |
|
probably benign |
Het |
| Sycp2l |
T |
A |
13: 41,291,431 (GRCm39) |
|
probably benign |
Het |
| Taar3 |
A |
G |
10: 23,825,715 (GRCm39) |
Y87C |
probably damaging |
Het |
| Tm4sf4 |
T |
C |
3: 57,341,278 (GRCm39) |
|
probably benign |
Het |
| Tssc4 |
T |
C |
7: 142,624,246 (GRCm39) |
S185P |
probably damaging |
Het |
| Ttc28 |
G |
T |
5: 111,331,162 (GRCm39) |
A430S |
probably damaging |
Het |
| Ulbp3 |
G |
A |
10: 3,075,082 (GRCm39) |
|
noncoding transcript |
Het |
| Vmn2r27 |
T |
C |
6: 124,201,249 (GRCm39) |
D236G |
probably benign |
Het |
| Vps54 |
G |
T |
11: 21,250,137 (GRCm39) |
D508Y |
probably damaging |
Het |
| Wdr53 |
G |
A |
16: 32,070,726 (GRCm39) |
V24M |
probably damaging |
Het |
| Xirp2 |
T |
G |
2: 67,339,210 (GRCm39) |
L484V |
probably benign |
Het |
| Zfyve26 |
T |
C |
12: 79,292,996 (GRCm39) |
D2051G |
probably damaging |
Het |
|
| Other mutations in Or52a24 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01892:Or52a24
|
APN |
7 |
103,381,687 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
IGL02121:Or52a24
|
APN |
7 |
103,381,676 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0140:Or52a24
|
UTSW |
7 |
103,381,349 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0505:Or52a24
|
UTSW |
7 |
103,381,583 (GRCm39) |
missense |
probably benign |
0.09 |
|
R1585:Or52a24
|
UTSW |
7 |
103,381,585 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R1907:Or52a24
|
UTSW |
7 |
103,381,190 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4766:Or52a24
|
UTSW |
7 |
103,381,457 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
R4954:Or52a24
|
UTSW |
7 |
103,381,414 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5464:Or52a24
|
UTSW |
7 |
103,381,396 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6737:Or52a24
|
UTSW |
7 |
103,381,357 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6761:Or52a24
|
UTSW |
7 |
103,381,691 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6782:Or52a24
|
UTSW |
7 |
103,381,549 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R7015:Or52a24
|
UTSW |
7 |
103,382,024 (GRCm39) |
missense |
probably null |
0.85 |
|
R7503:Or52a24
|
UTSW |
7 |
103,381,474 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7959:Or52a24
|
UTSW |
7 |
103,382,015 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8347:Or52a24
|
UTSW |
7 |
103,381,150 (GRCm39) |
missense |
probably benign |
|
|
R8984:Or52a24
|
UTSW |
7 |
103,381,220 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9000:Or52a24
|
UTSW |
7 |
103,381,672 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9204:Or52a24
|
UTSW |
7 |
103,382,056 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
X0058:Or52a24
|
UTSW |
7 |
103,381,489 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Or52a24
|
UTSW |
7 |
103,381,988 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- GCAGCCCTGTTTGTAGCTCCAT -3'
(R):5'- GGACACTTGATCTCGAATCTGTTTGGT -3'
Sequencing Primer
(F):5'- CAGGTTGAAATTCTACTGGACCAC -3'
(R):5'- TGGTCTTCACACCATAAACAATAGG -3'
|
| Posted On |
2013-07-11 |
Incidental Mutation