Mutagenetix > Incidental Mutation

Incidental Mutation 'R7273:Tubal3'

565412

Institutional Source

Beutler Lab

Gene Symbol

Tubal3

Ensembl Gene

ENSMUSG00000021216

Gene Name

tubulin, alpha-like 3

Synonyms

MMRRC Submission

045357-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.206) question?

Stock #

R7273 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

3974695-3985277 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 3980675 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 129 (I129N)

Ref Sequence

ENSEMBL: ENSMUSP00000021639 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021639]

AlphaFold

Q3UX10

Predicted Effect

probably damaging
Transcript: ENSMUST00000021639
AA Change: I129N

PolyPhen 2 Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000021639
Gene: ENSMUSG00000021216
AA Change: I129N

Domain	Start	End	E-Value	Type
Tubulin	56	253	9.39e-66	SMART
Tubulin_C	255	400	8.93e-49	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000223035

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

100% (49/49)

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Apol10a	A	T	15: 77,373,068 (GRCm39)	I235F	probably damaging	Het
Aspn	A	T	13: 49,712,352 (GRCm39)	E222D	probably benign	Het
Cfap221	A	T	1: 119,881,948 (GRCm39)	V280D	possibly damaging	Het
Chrd	G	A	16: 20,560,316 (GRCm39)	R922Q	probably benign	Het
Cnga4	T	A	7: 105,056,172 (GRCm39)	V361E	probably damaging	Het
Col15a1	T	A	4: 47,284,467 (GRCm39)		probably null	Het
Col6a4	A	G	9: 105,877,656 (GRCm39)	V2107A	possibly damaging	Het
Eea1	G	T	10: 95,825,493 (GRCm39)	V63F	probably benign	Het
Eml1	A	G	12: 108,504,432 (GRCm39)	H797R	possibly damaging	Het
Il1r2	A	G	1: 40,151,167 (GRCm39)	T141A	probably benign	Het
Il6st	T	C	13: 112,631,832 (GRCm39)	V457A	probably benign	Het
Kif19b	T	A	5: 140,461,767 (GRCm39)	V523E	probably damaging	Het
Lrrc56	T	C	7: 140,789,578 (GRCm39)	C532R	probably benign	Het
Lrrn4	T	C	2: 132,721,749 (GRCm39)	S23G	unknown	Het
Mapk8ip3	A	T	17: 25,125,148 (GRCm39)	D498E	probably benign	Het
Mcam	T	C	9: 44,052,241 (GRCm39)	F584S	possibly damaging	Het
Mdga1	A	T	17: 30,188,912 (GRCm39)	D50E	unknown	Het
Mga	T	C	2: 119,765,695 (GRCm39)	S1320P	probably damaging	Het
Muc5b	G	A	7: 141,405,307 (GRCm39)	G905D	unknown	Het
Ncor2	T	C	5: 125,100,687 (GRCm39)	N1297S		Het
Nisch	A	G	14: 30,896,364 (GRCm39)	V946A	unknown	Het
Npc1l1	A	G	11: 6,168,320 (GRCm39)	F957S	probably damaging	Het
Nuggc	A	G	14: 65,857,057 (GRCm39)	N402S	probably damaging	Het
Nup210l	A	G	3: 90,025,854 (GRCm39)	T159A	probably benign	Het
Or10g6	A	T	9: 39,933,961 (GRCm39)	I91F	probably benign	Het
Otud1	A	G	2: 19,663,873 (GRCm39)	D334G	probably damaging	Het
Pclo	T	C	5: 14,731,608 (GRCm39)	V3370A	unknown	Het
Prdm16	A	G	4: 154,429,910 (GRCm39)	L353P	probably damaging	Het
Prepl	A	C	17: 85,389,420 (GRCm39)	V128G	probably benign	Het
Pum1	T	C	4: 130,478,791 (GRCm39)	V568A	probably damaging	Het
Rab10	G	T	12: 3,306,891 (GRCm39)	S101R	probably benign	Het
Rfx3	C	T	19: 27,779,858 (GRCm39)	R435Q	probably damaging	Het
Rnf213	A	T	11: 119,322,582 (GRCm39)		probably null	Het
Sema5a	A	G	15: 32,417,608 (GRCm39)	D26G	probably benign	Het
Slc49a3	T	C	5: 108,589,857 (GRCm39)	D515G	probably benign	Het
Spata31d1b	G	A	13: 59,865,446 (GRCm39)	V865I	probably benign	Het
Sycp3	A	T	10: 88,305,428 (GRCm39)	Q176H	probably damaging	Het
Tdpoz8	G	T	3: 92,981,475 (GRCm39)	M90I	probably damaging	Het
Tmprss11d	A	T	5: 86,485,098 (GRCm39)	V102D	probably damaging	Het
Top1mt	A	G	15: 75,535,931 (GRCm39)	V457A	probably benign	Het
Ubr3	G	A	2: 69,809,677 (GRCm39)	D1217N	probably damaging	Het
Uggt1	A	G	1: 36,201,302 (GRCm39)	I1146T	probably damaging	Het
Umod	T	C	7: 119,076,250 (GRCm39)	Q172R	probably benign	Het
Uqcc5	G	T	14: 30,846,555 (GRCm39)	R55S	probably damaging	Het
Zdbf2	C	T	1: 63,342,563 (GRCm39)	A314V	possibly damaging	Het
Zfp787	A	T	7: 6,136,039 (GRCm39)	C71S	possibly damaging	Het
Zhx2	C	T	15: 57,686,824 (GRCm39)	A731V	probably benign	Het

Other mutations in Tubal3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00595:Tubal3	APN	13	3,983,015 (GRCm39)	missense	probably damaging	1.00
IGL02053:Tubal3	APN	13	3,983,159 (GRCm39)	missense	probably damaging	0.97
IGL02120:Tubal3	APN	13	3,980,675 (GRCm39)	missense	probably damaging	0.96
IGL02426:Tubal3	APN	13	3,982,750 (GRCm39)	missense	probably damaging	0.99
IGL02548:Tubal3	APN	13	3,980,554 (GRCm39)	missense	probably benign	0.05
IGL02981:Tubal3	APN	13	3,983,257 (GRCm39)	missense	probably benign	0.02
R0458:Tubal3	UTSW	13	3,983,137 (GRCm39)	missense	probably damaging	1.00
R1626:Tubal3	UTSW	13	3,982,841 (GRCm39)	missense	probably damaging	1.00
R1657:Tubal3	UTSW	13	3,983,011 (GRCm39)	missense	possibly damaging	0.87
R2084:Tubal3	UTSW	13	3,978,192 (GRCm39)	missense	possibly damaging	0.62
R3545:Tubal3	UTSW	13	3,983,560 (GRCm39)	makesense	probably null
R3976:Tubal3	UTSW	13	3,982,946 (GRCm39)	missense	probably benign
R4700:Tubal3	UTSW	13	3,983,514 (GRCm39)	missense	probably damaging	0.99
R4722:Tubal3	UTSW	13	3,978,185 (GRCm39)	missense	probably damaging	1.00
R5617:Tubal3	UTSW	13	3,983,432 (GRCm39)	missense	probably damaging	1.00
R6474:Tubal3	UTSW	13	3,983,107 (GRCm39)	missense	probably benign	0.10
R7049:Tubal3	UTSW	13	3,982,756 (GRCm39)	missense	probably damaging	1.00
R7082:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.56
R7586:Tubal3	UTSW	13	3,978,198 (GRCm39)	missense	possibly damaging	0.78
R8805:Tubal3	UTSW	13	3,983,293 (GRCm39)	missense	probably damaging	1.00
R8921:Tubal3	UTSW	13	3,983,428 (GRCm39)	missense	probably damaging	1.00
R9043:Tubal3	UTSW	13	3,982,708 (GRCm39)	nonsense	probably null
R9173:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.86
R9487:Tubal3	UTSW	13	3,980,674 (GRCm39)	missense	probably benign	0.03
Z1088:Tubal3	UTSW	13	3,983,511 (GRCm39)	missense	probably benign	0.06

Predicted Primers

PCR Primer
(F):5'- TGCCATACCACAAGAAAGGG -3'
(R):5'- AGGCTTCCCAGTCAACTAAAGC -3'

Sequencing Primer
(F):5'- TTCTATCAGAGTTAGAAAGAGGCC -3'
(R):5'- GCCTCCCCTTAAGCATCTACAGG -3'

Posted On

2019-06-26