Mutagenetix > Incidental Mutation

Incidental Mutation 'R0636:Aco1'

56662

Institutional Source

Beutler Lab

Gene Symbol

Aco1

Ensembl Gene

ENSMUSG00000028405

Gene Name

aconitase 1

Synonyms

Irp1, Aco-1, Irebp

MMRRC Submission

038825-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.425) question?

Stock #

R0636 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

40143081-40198338 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 40175697 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 146 (E146G)

Ref Sequence

ENSEMBL: ENSMUSP00000100038 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000102973]

AlphaFold

P28271

Predicted Effect

probably damaging
Transcript: ENSMUST00000102973
AA Change: E146G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000100038
Gene: ENSMUSG00000028405
AA Change: E146G

Domain	Start	End	E-Value	Type
Pfam:Aconitase	54	564	4.5e-180	PFAM
Pfam:Aconitase_C	692	821	1e-48	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000142360

Meta Mutation Damage Score

0.8503

Coding Region Coverage

1x: 99.4%
3x: 98.9%
10x: 97.7%
20x: 95.7%

Validation Efficiency

96% (74/77)

MGI Phenotype

FUNCTION: This gene encodes a member of the aconitase/IPM isomerase protein family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. Depending on iron levels in the cytosol, the encoded protein can function as either an aconitase enzyme or as an mRNA binding protein. When cellular iron levels are high, the encoded protein functions as an aconitase, an essential enzyme in the TCA cycle that catalyzes the conversion of citrate to isocitrate. When cellular iron levels are low, the encoded protein regulates iron uptake and utilization by binding to iron-responsive elements in the untranslated regions of mRNAs for genes involved in iron metabolism. Disruption of this gene is associated with pulmonary hypertension and polycythemia. [provided by RefSeq, Jan 2014]
PHENOTYPE: Mice homozygous for disruptions in this gene display no obvious phenotypic abnormalities. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4921539E11Rik	T	C	4: 103,088,414 (GRCm39)	Y264C	probably damaging	Het
8030423J24Rik	T	C	13: 71,032,344 (GRCm39)	F139L	unknown	Het
Adam2	T	G	14: 66,272,265 (GRCm39)	D639A	probably benign	Het
Adh4	G	T	3: 138,133,835 (GRCm39)	R315L	probably damaging	Het
Adprhl1	T	C	8: 13,298,702 (GRCm39)	D76G	probably damaging	Het
Akip1	T	C	7: 109,306,726 (GRCm39)		probably benign	Het
Ap3d1	T	A	10: 80,555,216 (GRCm39)	K370*	probably null	Het
Arfgef1	C	A	1: 10,270,076 (GRCm39)	V358L	probably benign	Het
Arpp21	A	T	9: 112,012,566 (GRCm39)	D85E	probably benign	Het
Azi2	A	T	9: 117,891,125 (GRCm39)	L383F	probably benign	Het
Bpgm	T	A	6: 34,481,222 (GRCm39)	D206E	probably benign	Het
Bsn	T	C	9: 107,985,033 (GRCm39)	D3007G	unknown	Het
Ccdc142	T	G	6: 83,084,179 (GRCm39)		probably benign	Het
Cep135	T	C	5: 76,763,504 (GRCm39)	V498A	probably benign	Het
Cntn6	A	T	6: 104,840,109 (GRCm39)	Q1003L	probably benign	Het
Cntnap2	T	A	6: 47,273,642 (GRCm39)		probably benign	Het
Csf2rb2	G	A	15: 78,176,160 (GRCm39)	Q139*	probably null	Het
Cyp3a16	A	G	5: 145,399,895 (GRCm39)	V101A	probably benign	Het
D630045J12Rik	T	C	6: 38,173,713 (GRCm39)	T152A	probably benign	Het
Def8	G	A	8: 124,181,096 (GRCm39)	W176*	probably null	Het
Dgkg	A	G	16: 22,398,479 (GRCm39)		probably benign	Het
Ear10	T	C	14: 44,160,451 (GRCm39)		probably null	Het
Fbxw2	A	T	2: 34,712,859 (GRCm39)	Y67*	probably null	Het
Flii	T	A	11: 60,606,378 (GRCm39)	Y1104F	probably damaging	Het
Gm973	G	A	1: 59,590,303 (GRCm39)	R270K	probably benign	Het
Gnl3	T	A	14: 30,739,110 (GRCm39)	K75N	probably damaging	Het
Gpc6	A	T	14: 117,861,905 (GRCm39)	M274L	probably benign	Het
Ifi47	A	G	11: 48,987,478 (GRCm39)	E415G	possibly damaging	Het
Ift57	A	G	16: 49,532,259 (GRCm39)	T130A	probably benign	Het
Itpr2	T	A	6: 146,072,910 (GRCm39)	D2373V	probably damaging	Het
Kat6a	T	C	8: 23,429,339 (GRCm39)	S1565P	possibly damaging	Het
Klhl6	A	T	16: 19,766,823 (GRCm39)		probably benign	Het
Klra2	T	C	6: 131,197,067 (GRCm39)		probably benign	Het
Lama5	A	G	2: 179,831,124 (GRCm39)		probably null	Het
Mapk4	A	G	18: 74,063,525 (GRCm39)	S566P	probably benign	Het
Mindy4	C	A	6: 55,253,570 (GRCm39)	R480S	possibly damaging	Het
Mterf3	T	C	13: 67,070,817 (GRCm39)		probably benign	Het
Mtmr2	A	G	9: 13,713,209 (GRCm39)		probably null	Het
Myef2l	T	C	3: 10,153,843 (GRCm39)	L204P	possibly damaging	Het
Naip5	T	C	13: 100,356,196 (GRCm39)	T1140A	probably benign	Het
Nf1	A	G	11: 79,426,529 (GRCm39)	T1648A	probably damaging	Het
Nlk	A	T	11: 78,586,670 (GRCm39)	D141E	probably benign	Het
Noxa1	C	A	2: 24,976,106 (GRCm39)		probably benign	Het
Or4g16	A	G	2: 111,136,757 (GRCm39)	N69S	probably benign	Het
Or5b121	A	T	19: 13,507,613 (GRCm39)	Y236F	possibly damaging	Het
Or5p55	T	C	7: 107,566,679 (GRCm39)	V25A	probably benign	Het
Otog	G	A	7: 45,913,652 (GRCm39)		probably null	Het
Pebp4	T	C	14: 70,285,796 (GRCm39)		probably benign	Het
Phgdh	G	T	3: 98,240,607 (GRCm39)	N100K	possibly damaging	Het
Pnisr	T	A	4: 21,873,800 (GRCm39)		probably benign	Het
Ptpn6	T	C	6: 124,702,242 (GRCm39)	H346R	probably benign	Het
Rsf1	T	C	7: 97,311,226 (GRCm39)	V652A	possibly damaging	Het
Rubcn	G	A	16: 32,649,056 (GRCm39)	H624Y	probably damaging	Het
Semp2l2a	T	C	8: 13,887,870 (GRCm39)	R74G	probably benign	Het
Setdb2	T	C	14: 59,644,153 (GRCm39)	N656D	probably benign	Het
Slc22a23	T	C	13: 34,483,076 (GRCm39)	T268A	probably benign	Het
Slc3a1	A	T	17: 85,340,222 (GRCm39)	T215S	possibly damaging	Het
Srsf2	A	G	11: 116,742,904 (GRCm39)	S206P	probably benign	Het
Susd2	T	A	10: 75,475,184 (GRCm39)	D542V	probably damaging	Het
Svep1	G	A	4: 58,073,121 (GRCm39)	Q2063*	probably null	Het
Syne2	G	A	12: 75,977,757 (GRCm39)	V1401M	possibly damaging	Het
Tenm2	A	G	11: 36,834,803 (GRCm39)	L64P	probably damaging	Het
Tigd2	A	G	6: 59,188,272 (GRCm39)	T380A	possibly damaging	Het
Trmt12	G	T	15: 58,745,834 (GRCm39)	V411F	probably damaging	Het
Ubr4	T	C	4: 139,163,613 (GRCm39)		probably null	Het
Ush2a	G	A	1: 188,554,935 (GRCm39)	C3571Y	probably benign	Het
Usp8	A	G	2: 126,562,030 (GRCm39)	M75V	possibly damaging	Het
Vcan	C	T	13: 89,852,825 (GRCm39)	D712N	probably damaging	Het
Vcan	C	A	13: 89,860,386 (GRCm39)	R327L	probably damaging	Het
Vps8	A	G	16: 21,253,683 (GRCm39)	E8G	probably benign	Het
Washc5	T	C	15: 59,231,258 (GRCm39)	D335G	probably benign	Het
Zbtb39	A	G	10: 127,578,704 (GRCm39)	N426S	probably benign	Het
Zfp184	T	A	13: 22,133,919 (GRCm39)	D55E	probably damaging	Het
Zfp882	T	C	8: 72,668,181 (GRCm39)	V336A	probably benign	Het

Other mutations in Aco1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00813:Aco1	APN	4	40,180,290 (GRCm39)	critical splice donor site	probably null
IGL01081:Aco1	APN	4	40,197,576 (GRCm39)	missense	probably benign
IGL01364:Aco1	APN	4	40,181,380 (GRCm39)	splice site	probably null
IGL01733:Aco1	APN	4	40,175,738 (GRCm39)	splice site	probably benign
IGL02232:Aco1	APN	4	40,175,996 (GRCm39)	missense	probably damaging	1.00
IGL02709:Aco1	APN	4	40,180,199 (GRCm39)	missense	possibly damaging	0.86
IGL03164:Aco1	APN	4	40,167,116 (GRCm39)	missense	probably benign	0.30
IGL03208:Aco1	APN	4	40,186,424 (GRCm39)	missense	possibly damaging	0.55
IGL03324:Aco1	APN	4	40,186,363 (GRCm39)	missense	probably benign
IGL03353:Aco1	APN	4	40,175,893 (GRCm39)	missense	probably damaging	0.99
krebs	UTSW	4	40,180,210 (GRCm39)	nonsense	probably null
R0002:Aco1	UTSW	4	40,176,649 (GRCm39)	splice site	probably benign
R0486:Aco1	UTSW	4	40,177,783 (GRCm39)	missense	probably damaging	1.00
R1344:Aco1	UTSW	4	40,179,008 (GRCm39)	missense	probably damaging	1.00
R1844:Aco1	UTSW	4	40,197,566 (GRCm39)	missense	probably benign	0.00
R1889:Aco1	UTSW	4	40,164,607 (GRCm39)	critical splice acceptor site	probably null
R1932:Aco1	UTSW	4	40,176,499 (GRCm39)	missense	probably damaging	1.00
R1959:Aco1	UTSW	4	40,167,193 (GRCm39)	critical splice donor site	probably null
R1965:Aco1	UTSW	4	40,175,730 (GRCm39)	missense	probably damaging	1.00
R1983:Aco1	UTSW	4	40,175,845 (GRCm39)	missense	probably benign	0.37
R2072:Aco1	UTSW	4	40,183,605 (GRCm39)	missense	probably damaging	1.00
R2073:Aco1	UTSW	4	40,183,605 (GRCm39)	missense	probably damaging	1.00
R2074:Aco1	UTSW	4	40,183,605 (GRCm39)	missense	probably damaging	1.00
R3155:Aco1	UTSW	4	40,182,915 (GRCm39)	missense	probably damaging	1.00
R4595:Aco1	UTSW	4	40,167,139 (GRCm39)	missense	probably benign	0.43
R4999:Aco1	UTSW	4	40,176,507 (GRCm39)	missense	probably damaging	1.00
R5131:Aco1	UTSW	4	40,163,797 (GRCm39)	missense	probably benign
R5354:Aco1	UTSW	4	40,180,290 (GRCm39)	critical splice donor site	probably null
R5380:Aco1	UTSW	4	40,177,848 (GRCm39)	missense	probably damaging	1.00
R6352:Aco1	UTSW	4	40,186,367 (GRCm39)	missense	probably benign	0.10
R6353:Aco1	UTSW	4	40,186,367 (GRCm39)	missense	probably benign	0.10
R6380:Aco1	UTSW	4	40,185,028 (GRCm39)	missense	probably benign	0.02
R6540:Aco1	UTSW	4	40,186,367 (GRCm39)	missense	probably benign	0.10
R6751:Aco1	UTSW	4	40,188,330 (GRCm39)	splice site	probably null
R6760:Aco1	UTSW	4	40,180,210 (GRCm39)	nonsense	probably null
R6833:Aco1	UTSW	4	40,164,747 (GRCm39)	missense	probably benign	0.00
R6834:Aco1	UTSW	4	40,164,747 (GRCm39)	missense	probably benign	0.00
R7019:Aco1	UTSW	4	40,186,376 (GRCm39)	missense	probably damaging	1.00
R7852:Aco1	UTSW	4	40,180,263 (GRCm39)	missense	probably benign	0.00
R7912:Aco1	UTSW	4	40,184,983 (GRCm39)	missense	probably damaging	1.00
R8188:Aco1	UTSW	4	40,180,284 (GRCm39)	missense	probably benign	0.00
R8329:Aco1	UTSW	4	40,186,376 (GRCm39)	missense	possibly damaging	0.83
R8346:Aco1	UTSW	4	40,177,876 (GRCm39)	missense	probably damaging	1.00
R8796:Aco1	UTSW	4	40,179,037 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TGGATTTCCACCGTGCTGAAGG -3'
(R):5'- CCAGGAGGGATTATCCGCATGTTG -3'

Sequencing Primer
(F):5'- GGTCAAAGGTAGCACTCGTC -3'
(R):5'- TATCCGCATGTTGCAAAAGGC -3'

Posted On

2013-07-11