Mutagenetix > Incidental Mutation

Incidental Mutation 'R7315:Trim67'

567887

Institutional Source

Beutler Lab

Gene Symbol

Trim67

Ensembl Gene

ENSMUSG00000036913

Gene Name

tripartite motif-containing 67

Synonyms

D130049O21Rik

MMRRC Submission

045368-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.117) question?

Stock #

R7315 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

125519831-125561452 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 125521069 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Threonine at position 144 (S144T)

Ref Sequence

ENSEMBL: ENSMUSP00000040601 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000041106] [ENSMUST00000167588] [ENSMUST00000211867]

AlphaFold

Q505D9

Predicted Effect

probably benign
Transcript: ENSMUST00000041106
AA Change: S144T

PolyPhen 2 Score 0.176 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000040601
Gene: ENSMUSG00000036913
AA Change: S144T

Domain	Start	End	E-Value	Type
RING	7	157	1.41e-4	SMART
BBOX	198	248	4.65e-5	SMART
BBOX	285	327	3.04e-9	SMART
BBC	334	460	1.18e-28	SMART
FN3	498	579	1.75e-6	SMART
Pfam:SPRY	635	755	1.3e-13	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000167588
AA Change: S144T

PolyPhen 2 Score 0.176 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000130343
Gene: ENSMUSG00000036913
AA Change: S144T

Domain	Start	End	E-Value	Type
RING	7	157	1.41e-4	SMART
BBOX	198	248	4.65e-5	SMART
BBOX	285	327	3.04e-9	SMART
BBC	334	460	1.18e-28	SMART
FN3	498	579	1.75e-6	SMART
Pfam:SPRY	633	756	3.6e-17	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000211867
AA Change: S144T

PolyPhen 2 Score 0.176 (Sensitivity: 0.92; Specificity: 0.87)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.5%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca14	A	C	7: 119,893,341 (GRCm39)	I1264L	probably benign	Het
Abcg8	C	A	17: 85,004,142 (GRCm39)	D484E	probably damaging	Het
Abhd13	T	A	8: 10,037,970 (GRCm39)	L189H	probably damaging	Het
Acox2	T	C	14: 8,256,139 (GRCm38)	D60G	probably damaging	Het
Acp3	A	G	9: 104,193,423 (GRCm39)		probably null	Het
Agpat4	C	T	17: 12,429,185 (GRCm39)	R146C	probably damaging	Het
Antxrl	T	C	14: 33,793,504 (GRCm39)	S411P	unknown	Het
B4galt5	A	G	2: 167,143,296 (GRCm39)	V376A	probably damaging	Het
Camk1d	T	C	2: 5,344,041 (GRCm39)	Y198C	probably damaging	Het
Cd1d1	C	T	3: 86,905,420 (GRCm39)	R191H	possibly damaging	Het
Cd93	A	G	2: 148,284,461 (GRCm39)	V295A	probably damaging	Het
Cdc27	G	A	11: 104,406,270 (GRCm39)	T615I	possibly damaging	Het
Cfap74	T	C	4: 155,547,476 (GRCm39)	Y1221H	unknown	Het
Col24a1	G	A	3: 145,137,625 (GRCm39)	S896N	possibly damaging	Het
Crppa	A	G	12: 36,440,373 (GRCm39)	T94A	probably benign	Het
Cst7	C	A	2: 150,412,503 (GRCm39)	P22Q	probably benign	Het
Dnah6	C	T	6: 73,061,743 (GRCm39)	A2781T	probably damaging	Het
Dscaml1	G	A	9: 45,656,423 (GRCm39)	A1588T	probably benign	Het
Dsg2	A	T	18: 20,712,217 (GRCm39)	I118F	probably damaging	Het
Eif1ad2	A	G	12: 87,786,473 (GRCm39)	E128G	unknown	Het
Eme2	G	A	17: 25,113,840 (GRCm39)	R62W	probably damaging	Het
Epha3	A	T	16: 63,372,972 (GRCm39)	D910E	probably benign	Het
Ext1	T	C	15: 52,936,783 (GRCm39)	D654G	probably damaging	Het
Fnip2	A	G	3: 79,413,512 (GRCm39)		probably null	Het
Gon4l	T	A	3: 88,802,486 (GRCm39)	H1032Q	probably benign	Het
Kitl	G	A	10: 99,851,974 (GRCm39)	R31H	unknown	Het
Lcp2	G	A	11: 34,019,906 (GRCm39)		probably null	Het
Lrp2	T	C	2: 69,322,166 (GRCm39)	H1921R	probably damaging	Het
Lvrn	A	G	18: 47,010,051 (GRCm39)	T400A	probably benign	Het
Mak16	G	A	8: 31,654,766 (GRCm39)	R143*	probably null	Het
Mettl23	A	G	11: 116,739,928 (GRCm39)	I159V	probably benign	Het
Mr1	T	C	1: 155,005,036 (GRCm39)	N335D	probably benign	Het
Muc2	T	C	7: 141,276,645 (GRCm39)	C12R	probably damaging	Het
Myom1	T	C	17: 71,387,892 (GRCm39)		probably null	Het
Nav2	A	G	7: 49,198,037 (GRCm39)	N33S	possibly damaging	Het
Ninl	A	G	2: 150,791,970 (GRCm39)	V851A	probably benign	Het
Nmt1	A	G	11: 102,951,009 (GRCm39)	N367D	probably benign	Het
Noc2l	T	G	4: 156,325,817 (GRCm39)	S354R	probably damaging	Het
Opn1sw	A	T	6: 29,379,362 (GRCm39)	I214N	probably damaging	Het
Or12d14-ps1	G	T	17: 37,673,551 (GRCm39)	C181F	probably damaging	Het
Or13e8	T	A	4: 43,696,961 (GRCm39)	I71F	probably damaging	Het
Or14c40	T	C	7: 86,313,445 (GRCm39)	S192P	probably damaging	Het
Or4k52	T	C	2: 111,611,004 (GRCm39)	V113A	probably damaging	Het
Or5ac16	A	G	16: 59,022,496 (GRCm39)	F98L	probably benign	Het
Or7e169	G	T	9: 19,757,131 (GRCm39)	S261R	probably damaging	Het
Or8a1	T	C	9: 37,641,872 (GRCm39)	M136V	probably benign	Het
Or8b9	A	T	9: 37,766,543 (GRCm39)	Y143F	probably benign	Het
Papss2	T	C	19: 32,616,625 (GRCm39)	V217A	possibly damaging	Het
Pes1	A	G	11: 3,926,085 (GRCm39)	I291M	probably benign	Het
Ptprb	T	A	10: 116,198,284 (GRCm39)	I1660N	possibly damaging	Het
Rapgef1	C	A	2: 29,624,504 (GRCm39)	T1030K	probably damaging	Het
Rassf8	A	G	6: 145,761,477 (GRCm39)	M268V	probably benign	Het
Rbl2	A	T	8: 91,802,640 (GRCm39)	T154S	probably damaging	Het
Rgs1	A	G	1: 144,124,637 (GRCm39)		probably null	Het
Rpgrip1	C	T	14: 52,358,458 (GRCm39)	T188I	not run	Het
Rrp1b	T	A	17: 32,277,545 (GRCm39)	F608L	probably benign	Het
Sbp	C	T	17: 24,164,280 (GRCm39)	A154V	probably benign	Het
Scara3	C	T	14: 66,168,889 (GRCm39)	E243K	probably damaging	Het
Serpinb6b	A	T	13: 33,156,240 (GRCm39)	D110V	probably benign	Het
Skic2	T	A	17: 35,060,145 (GRCm39)	D875V	probably benign	Het
Slc2a4	G	C	11: 69,837,259 (GRCm39)	T59R	probably damaging	Het
Slc4a1	A	G	11: 102,247,310 (GRCm39)	S462P	probably damaging	Het
Slc66a1	G	A	4: 139,029,181 (GRCm39)	T101M	probably damaging	Het
Snx33	C	T	9: 56,833,151 (GRCm39)	R306H	probably damaging	Het
Srf	T	C	17: 46,862,720 (GRCm39)		probably null	Het
Steap3	A	G	1: 120,155,642 (GRCm39)	V439A	probably benign	Het
Syt10	C	T	15: 89,698,541 (GRCm39)	D268N	probably damaging	Het
Tent5b	C	T	4: 133,214,395 (GRCm39)	T422I	probably damaging	Het
Terf2	T	C	8: 107,807,849 (GRCm39)	N242S	probably benign	Het
Tex15	A	G	8: 34,071,544 (GRCm39)	T2364A	probably benign	Het
Tgfbr2	A	T	9: 115,938,806 (GRCm39)	H365Q	possibly damaging	Het
Tnrc6c	T	G	11: 117,614,354 (GRCm39)	N837K	probably benign	Het
Zc3hav1l	T	G	6: 38,272,082 (GRCm39)	D229A	possibly damaging	Het
Zmym4	A	T	4: 126,776,385 (GRCm39)	V1184E	probably benign	Het

Other mutations in Trim67

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00817:Trim67	APN	8	125,541,799 (GRCm39)	splice site	probably benign
IGL01676:Trim67	APN	8	125,541,899 (GRCm39)	missense	possibly damaging	0.51
IGL01779:Trim67	APN	8	125,554,860 (GRCm39)	missense	probably damaging	1.00
IGL02057:Trim67	APN	8	125,549,869 (GRCm39)	missense	probably benign	0.00
IGL02201:Trim67	APN	8	125,520,797 (GRCm39)	missense	probably benign	0.26
IGL02304:Trim67	APN	8	125,552,691 (GRCm39)	missense	probably damaging	1.00
R0068:Trim67	UTSW	8	125,521,307 (GRCm39)	missense	probably damaging	0.97
R0241:Trim67	UTSW	8	125,549,929 (GRCm39)	missense	probably damaging	0.99
R0319:Trim67	UTSW	8	125,549,966 (GRCm39)	missense	probably damaging	0.98
R0471:Trim67	UTSW	8	125,521,397 (GRCm39)	missense	probably benign	0.01
R1171:Trim67	UTSW	8	125,555,820 (GRCm39)	missense	probably damaging	0.97
R1175:Trim67	UTSW	8	125,543,774 (GRCm39)	missense	probably damaging	0.99
R1444:Trim67	UTSW	8	125,549,932 (GRCm39)	missense	probably benign	0.01
R1596:Trim67	UTSW	8	125,552,878 (GRCm39)	missense	probably damaging	0.97
R1706:Trim67	UTSW	8	125,521,160 (GRCm39)	missense	probably damaging	1.00
R4951:Trim67	UTSW	8	125,521,406 (GRCm39)	missense	probably benign
R5200:Trim67	UTSW	8	125,551,589 (GRCm39)	missense	probably damaging	0.99
R5787:Trim67	UTSW	8	125,521,051 (GRCm39)	nonsense	probably null
R6023:Trim67	UTSW	8	125,541,843 (GRCm39)	missense	probably damaging	0.99
R6290:Trim67	UTSW	8	125,549,918 (GRCm39)	missense	probably benign	0.00
R6536:Trim67	UTSW	8	125,521,081 (GRCm39)	missense	possibly damaging	0.51
R7660:Trim67	UTSW	8	125,547,024 (GRCm39)	missense	probably damaging	1.00
R8432:Trim67	UTSW	8	125,520,801 (GRCm39)	small deletion	probably benign
R8446:Trim67	UTSW	8	125,520,730 (GRCm39)	missense	probably damaging	0.99
R8713:Trim67	UTSW	8	125,547,074 (GRCm39)	missense	probably null	0.06
R8897:Trim67	UTSW	8	125,552,718 (GRCm39)	missense	probably benign
R9322:Trim67	UTSW	8	125,549,967 (GRCm39)	nonsense	probably null
R9430:Trim67	UTSW	8	125,552,956 (GRCm39)	missense	probably damaging	0.98
R9542:Trim67	UTSW	8	125,521,497 (GRCm39)	missense	possibly damaging	0.84
Z1088:Trim67	UTSW	8	125,543,780 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- CACAATGTCTGCTTGCCGTG -3'
(R):5'- ATAGAGCACGTCGCATTGC -3'

Sequencing Primer
(F):5'- ACTATCGCGGTTCAGACCC -3'
(R):5'- TCGCACAGCTGGCAGATG -3'

Posted On

2019-06-26