Incidental Mutation 'R7320:Map4'
ID |
568150 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Map4
|
Ensembl Gene |
ENSMUSG00000032479 |
Gene Name |
microtubule-associated protein 4 |
Synonyms |
MAP 4, Mtap4 |
MMRRC Submission |
045370-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R7320 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
9 |
Chromosomal Location |
109760528-109913023 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 109910585 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Alanine
at position 1093
(T1093A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000035055
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035055]
[ENSMUST00000062368]
[ENSMUST00000111991]
[ENSMUST00000163979]
[ENSMUST00000164930]
[ENSMUST00000165596]
[ENSMUST00000165876]
[ENSMUST00000196171]
[ENSMUST00000197928]
[ENSMUST00000198425]
[ENSMUST00000198511]
[ENSMUST00000199161]
[ENSMUST00000199461]
[ENSMUST00000199498]
[ENSMUST00000199529]
[ENSMUST00000199548]
[ENSMUST00000199693]
[ENSMUST00000200066]
|
AlphaFold |
P27546 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000035055
AA Change: T1093A
PolyPhen 2
Score 0.240 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000035055 Gene: ENSMUSG00000032479 AA Change: T1093A
Domain | Start | End | E-Value | Type |
low complexity region
|
254 |
265 |
N/A |
INTRINSIC |
internal_repeat_1
|
266 |
379 |
4.96e-7 |
PROSPERO |
low complexity region
|
401 |
420 |
N/A |
INTRINSIC |
internal_repeat_1
|
439 |
550 |
4.96e-7 |
PROSPERO |
low complexity region
|
659 |
674 |
N/A |
INTRINSIC |
low complexity region
|
720 |
742 |
N/A |
INTRINSIC |
low complexity region
|
760 |
775 |
N/A |
INTRINSIC |
low complexity region
|
879 |
889 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
903 |
926 |
2e-12 |
PFAM |
Pfam:Tubulin-binding
|
965 |
995 |
4.9e-18 |
PFAM |
Pfam:Tubulin-binding
|
996 |
1026 |
7.4e-18 |
PFAM |
Pfam:Tubulin-binding
|
1027 |
1058 |
4.4e-15 |
PFAM |
low complexity region
|
1093 |
1108 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000062368
|
SMART Domains |
Protein: ENSMUSP00000062622 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
low complexity region
|
1 |
12 |
N/A |
INTRINSIC |
low complexity region
|
48 |
64 |
N/A |
INTRINSIC |
internal_repeat_1
|
76 |
123 |
2.53e-5 |
PROSPERO |
low complexity region
|
217 |
228 |
N/A |
INTRINSIC |
internal_repeat_1
|
268 |
314 |
2.53e-5 |
PROSPERO |
low complexity region
|
321 |
342 |
N/A |
INTRINSIC |
DEXDc
|
461 |
650 |
9.66e-29 |
SMART |
low complexity region
|
679 |
689 |
N/A |
INTRINSIC |
HELICc
|
711 |
816 |
1.63e-17 |
SMART |
HA2
|
879 |
969 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
984 |
1134 |
5.7e-9 |
PFAM |
low complexity region
|
1200 |
1208 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111991
|
SMART Domains |
Protein: ENSMUSP00000107622 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000163979
AA Change: T382A
PolyPhen 2
Score 0.240 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000129362 Gene: ENSMUSG00000032479 AA Change: T382A
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
5.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
2.2e-18 |
PFAM |
Pfam:Tubulin-binding
|
805 |
836 |
1.6e-11 |
PFAM |
low complexity region
|
871 |
886 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000164930
AA Change: T902A
PolyPhen 2
Score 0.650 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000131285 Gene: ENSMUSG00000032479 AA Change: T902A
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
6e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
4.5e-19 |
PFAM |
Pfam:Tubulin-binding
|
805 |
835 |
2.3e-18 |
PFAM |
Pfam:Tubulin-binding
|
836 |
867 |
1.6e-11 |
PFAM |
low complexity region
|
902 |
917 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000165596
|
SMART Domains |
Protein: ENSMUSP00000129174 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
70 |
117 |
6.77e-5 |
PROSPERO |
low complexity region
|
211 |
222 |
N/A |
INTRINSIC |
internal_repeat_1
|
262 |
308 |
6.77e-5 |
PROSPERO |
low complexity region
|
315 |
336 |
N/A |
INTRINSIC |
DEXDc
|
455 |
644 |
9.66e-29 |
SMART |
low complexity region
|
673 |
683 |
N/A |
INTRINSIC |
HELICc
|
705 |
810 |
1.63e-17 |
SMART |
HA2
|
873 |
963 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
975 |
1129 |
1.8e-7 |
PFAM |
low complexity region
|
1194 |
1202 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000165876
AA Change: T1093A
PolyPhen 2
Score 0.493 (Sensitivity: 0.88; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000132662 Gene: ENSMUSG00000032479 AA Change: T1093A
Domain | Start | End | E-Value | Type |
low complexity region
|
254 |
265 |
N/A |
INTRINSIC |
internal_repeat_1
|
266 |
379 |
4.95e-7 |
PROSPERO |
low complexity region
|
401 |
420 |
N/A |
INTRINSIC |
internal_repeat_1
|
439 |
550 |
4.95e-7 |
PROSPERO |
low complexity region
|
659 |
674 |
N/A |
INTRINSIC |
low complexity region
|
720 |
742 |
N/A |
INTRINSIC |
low complexity region
|
760 |
775 |
N/A |
INTRINSIC |
low complexity region
|
879 |
889 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
896 |
926 |
8.5e-16 |
PFAM |
Pfam:Tubulin-binding
|
965 |
995 |
6.4e-19 |
PFAM |
Pfam:Tubulin-binding
|
996 |
1026 |
3.3e-18 |
PFAM |
Pfam:Tubulin-binding
|
1027 |
1058 |
2.3e-11 |
PFAM |
low complexity region
|
1093 |
1108 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000196171
|
SMART Domains |
Protein: ENSMUSP00000143616 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
39 |
86 |
5.84e-5 |
PROSPERO |
low complexity region
|
180 |
191 |
N/A |
INTRINSIC |
internal_repeat_1
|
231 |
277 |
5.84e-5 |
PROSPERO |
low complexity region
|
284 |
305 |
N/A |
INTRINSIC |
DEXDc
|
424 |
613 |
9.66e-29 |
SMART |
low complexity region
|
642 |
652 |
N/A |
INTRINSIC |
HELICc
|
674 |
779 |
1.63e-17 |
SMART |
HA2
|
842 |
932 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
947 |
1097 |
2.8e-9 |
PFAM |
low complexity region
|
1163 |
1171 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000197928
|
SMART Domains |
Protein: ENSMUSP00000142549 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000198425
|
SMART Domains |
Protein: ENSMUSP00000142659 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
70 |
117 |
6.77e-5 |
PROSPERO |
low complexity region
|
211 |
222 |
N/A |
INTRINSIC |
internal_repeat_1
|
262 |
308 |
6.77e-5 |
PROSPERO |
low complexity region
|
315 |
336 |
N/A |
INTRINSIC |
DEXDc
|
455 |
644 |
9.66e-29 |
SMART |
low complexity region
|
673 |
683 |
N/A |
INTRINSIC |
HELICc
|
705 |
810 |
1.63e-17 |
SMART |
HA2
|
873 |
963 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
975 |
1129 |
1.8e-7 |
PFAM |
low complexity region
|
1194 |
1202 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000198511
AA Change: T183A
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000142558 Gene: ENSMUSG00000032479 AA Change: T183A
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
17 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
24 |
54 |
7.3e-14 |
PFAM |
Pfam:Tubulin-binding
|
55 |
85 |
5.3e-17 |
PFAM |
Pfam:Tubulin-binding
|
86 |
116 |
2.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
117 |
148 |
1.9e-9 |
PFAM |
low complexity region
|
183 |
198 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199161
AA Change: T176A
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000143205 Gene: ENSMUSG00000032479 AA Change: T176A
Domain | Start | End | E-Value | Type |
Pfam:Tubulin-binding
|
16 |
46 |
6.7e-14 |
PFAM |
Pfam:Tubulin-binding
|
47 |
77 |
4.9e-17 |
PFAM |
Pfam:Tubulin-binding
|
78 |
108 |
2.5e-16 |
PFAM |
Pfam:Tubulin-binding
|
109 |
140 |
1.7e-9 |
PFAM |
low complexity region
|
176 |
191 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199332
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199461
AA Change: T244A
PolyPhen 2
Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)
|
SMART Domains |
Protein: ENSMUSP00000143296 Gene: ENSMUSG00000032479 AA Change: T244A
Domain | Start | End | E-Value | Type |
low complexity region
|
99 |
109 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
116 |
146 |
1e-13 |
PFAM |
Pfam:Tubulin-binding
|
147 |
177 |
3.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
178 |
209 |
2.6e-9 |
PFAM |
low complexity region
|
244 |
259 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000199498
AA Change: T871A
PolyPhen 2
Score 0.650 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000142439 Gene: ENSMUSG00000032479 AA Change: T871A
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
5.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
2.2e-18 |
PFAM |
Pfam:Tubulin-binding
|
805 |
836 |
1.6e-11 |
PFAM |
low complexity region
|
871 |
886 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199529
|
SMART Domains |
Protein: ENSMUSP00000142489 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199548
|
SMART Domains |
Protein: ENSMUSP00000143408 Gene: ENSMUSG00000032479
Domain | Start | End | E-Value | Type |
low complexity region
|
99 |
109 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
116 |
146 |
1.1e-13 |
PFAM |
Pfam:Tubulin-binding
|
147 |
177 |
7.9e-17 |
PFAM |
Pfam:Tubulin-binding
|
178 |
208 |
4.1e-16 |
PFAM |
Pfam:Tubulin-binding
|
209 |
240 |
2.8e-9 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199693
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199985
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000200066
|
SMART Domains |
Protein: ENSMUSP00000143371 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000200593
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.8%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a major non-neuronal microtubule-associated protein. This protein contains a domain similar to the microtubule-binding domains of neuronal microtubule-associated protein (MAP2) and microtubule-associated protein tau (MAPT/TAU). This protein promotes microtubule assembly, and has been shown to counteract destabilization of interphase microtubule catastrophe promotion. Cyclin B was found to interact with this protein, which targets cell division cycle 2 (CDC2) kinase to microtubules. The phosphorylation of this protein affects microtubule properties and cell cycle progression. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2008] PHENOTYPE: Mice homozygous for a gene trapped allele are viable and do not display any overt phenotypic abnormalities. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 84 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc3 |
A |
G |
11: 94,258,471 (GRCm39) |
I458T |
probably benign |
Het |
Adam29 |
A |
G |
8: 56,325,749 (GRCm39) |
I235T |
possibly damaging |
Het |
Afap1 |
G |
A |
5: 36,105,567 (GRCm39) |
V174I |
probably damaging |
Het |
Ak8 |
A |
T |
2: 28,703,004 (GRCm39) |
D456V |
probably damaging |
Het |
Alb |
T |
C |
5: 90,612,846 (GRCm39) |
|
probably null |
Het |
Alox12 |
C |
T |
11: 70,145,298 (GRCm39) |
A92T |
probably benign |
Het |
Arhgap23 |
T |
C |
11: 97,342,371 (GRCm39) |
S218P |
probably benign |
Het |
Blm |
G |
A |
7: 80,105,102 (GRCm39) |
Q1389* |
probably null |
Het |
C1ql4 |
A |
T |
15: 98,985,605 (GRCm39) |
V2E |
unknown |
Het |
Casp12 |
A |
G |
9: 5,348,897 (GRCm39) |
|
probably null |
Het |
Ccdc73 |
A |
T |
2: 104,829,521 (GRCm39) |
I1065F |
possibly damaging |
Het |
Ccdc83 |
C |
T |
7: 89,873,242 (GRCm39) |
G371D |
probably damaging |
Het |
Cfap65 |
A |
G |
1: 74,965,763 (GRCm39) |
S416P |
probably damaging |
Het |
Cftr |
T |
A |
6: 18,319,012 (GRCm39) |
C1351S |
probably damaging |
Het |
Clcn4 |
A |
T |
7: 7,294,827 (GRCm39) |
H311Q |
probably benign |
Het |
Cldn13 |
T |
G |
5: 134,943,874 (GRCm39) |
I104L |
probably benign |
Het |
Cul9 |
A |
G |
17: 46,821,835 (GRCm39) |
V1880A |
possibly damaging |
Het |
Ddx17 |
A |
T |
15: 79,416,105 (GRCm39) |
D407E |
probably damaging |
Het |
Ddx28 |
G |
A |
8: 106,737,957 (GRCm39) |
P34S |
probably damaging |
Het |
Dnah5 |
A |
T |
15: 28,270,616 (GRCm39) |
N973Y |
probably null |
Het |
Dnai4 |
A |
T |
4: 102,907,384 (GRCm39) |
I634N |
possibly damaging |
Het |
Dock10 |
A |
G |
1: 80,527,421 (GRCm39) |
|
probably null |
Het |
Dock3 |
T |
C |
9: 106,772,723 (GRCm39) |
D510G |
probably benign |
Het |
Dst |
T |
A |
1: 34,230,175 (GRCm39) |
D2589E |
probably benign |
Het |
E2f7 |
T |
C |
10: 110,599,991 (GRCm39) |
Y249H |
not run |
Het |
Eef2kmt |
T |
C |
16: 5,068,373 (GRCm39) |
Y69C |
possibly damaging |
Het |
Elapor1 |
T |
A |
3: 108,371,619 (GRCm39) |
K650* |
probably null |
Het |
Erlin1 |
T |
C |
19: 44,047,504 (GRCm39) |
Y139C |
probably damaging |
Het |
Exog |
G |
T |
9: 119,291,544 (GRCm39) |
V274L |
possibly damaging |
Het |
Fam83e |
G |
A |
7: 45,371,896 (GRCm39) |
V98M |
probably benign |
Het |
Fras1 |
C |
T |
5: 96,857,745 (GRCm39) |
T2013I |
probably benign |
Het |
Gart |
G |
T |
16: 91,418,569 (GRCm39) |
A970E |
probably benign |
Het |
Gga2 |
T |
A |
7: 121,601,326 (GRCm39) |
H259L |
probably benign |
Het |
Glis3 |
C |
A |
19: 28,508,998 (GRCm39) |
V329F |
probably damaging |
Het |
Gm6356 |
T |
A |
14: 6,972,923 (GRCm38) |
N53I |
probably damaging |
Het |
Golgb1 |
C |
A |
16: 36,736,313 (GRCm39) |
C1894* |
probably null |
Het |
Ifi203 |
T |
C |
1: 173,756,733 (GRCm39) |
N350S |
unknown |
Het |
Isy1 |
T |
A |
6: 87,810,688 (GRCm39) |
R55S |
unknown |
Het |
Itsn1 |
A |
T |
16: 91,636,587 (GRCm39) |
D678V |
unknown |
Het |
Lhcgr |
T |
A |
17: 89,049,506 (GRCm39) |
R673S |
probably benign |
Het |
Lnx2 |
C |
A |
5: 146,956,943 (GRCm39) |
R601L |
possibly damaging |
Het |
Minar1 |
A |
G |
9: 89,483,679 (GRCm39) |
S573P |
probably benign |
Het |
Mink1 |
A |
G |
11: 70,489,899 (GRCm39) |
K92E |
probably benign |
Het |
Moxd1 |
A |
G |
10: 24,177,363 (GRCm39) |
I560V |
probably benign |
Het |
Mrc2 |
C |
A |
11: 105,220,061 (GRCm39) |
D327E |
possibly damaging |
Het |
Notch2 |
A |
G |
3: 98,038,643 (GRCm39) |
E1262G |
possibly damaging |
Het |
Or2g1 |
T |
A |
17: 38,107,248 (GRCm39) |
N304K |
probably benign |
Het |
Or4k48 |
A |
G |
2: 111,476,297 (GRCm39) |
L15S |
probably benign |
Het |
Or52d3 |
C |
A |
7: 104,229,645 (GRCm39) |
S264* |
probably null |
Het |
Or5an1 |
G |
A |
19: 12,261,180 (GRCm39) |
G256D |
possibly damaging |
Het |
Or5b120 |
T |
A |
19: 13,480,544 (GRCm39) |
M279K |
possibly damaging |
Het |
Or5j3 |
GTACTTTTT |
GT |
2: 86,128,338 (GRCm39) |
|
probably null |
Het |
Or5m13 |
A |
T |
2: 85,748,718 (GRCm39) |
I150F |
probably benign |
Het |
Or6c5b |
A |
T |
10: 129,245,654 (GRCm39) |
T140S |
possibly damaging |
Het |
Pcbp2 |
T |
A |
15: 102,381,782 (GRCm39) |
V5E |
probably damaging |
Het |
Pcp4l1 |
G |
A |
1: 171,002,034 (GRCm39) |
A42V |
possibly damaging |
Het |
Pgghg |
A |
T |
7: 140,522,953 (GRCm39) |
Y104F |
probably benign |
Het |
Plscr2 |
T |
C |
9: 92,173,193 (GRCm39) |
|
probably null |
Het |
Ppfibp1 |
C |
T |
6: 146,879,551 (GRCm39) |
A25V |
probably damaging |
Het |
Ptgfr |
C |
T |
3: 151,541,034 (GRCm39) |
G158D |
probably benign |
Het |
Ptgs2 |
T |
C |
1: 149,978,446 (GRCm39) |
F186S |
probably damaging |
Het |
Ptpn14 |
A |
G |
1: 189,564,956 (GRCm39) |
E181G |
probably benign |
Het |
Rpgrip1 |
A |
G |
14: 52,368,673 (GRCm39) |
K291E |
possibly damaging |
Het |
Rtn4rl1 |
T |
C |
11: 75,085,122 (GRCm39) |
|
probably null |
Het |
Sema3b |
T |
A |
9: 107,478,141 (GRCm39) |
M415L |
probably benign |
Het |
Sh3bp4 |
A |
G |
1: 89,073,216 (GRCm39) |
E688G |
probably damaging |
Het |
Slco6c1 |
G |
A |
1: 97,055,887 (GRCm39) |
R5C |
possibly damaging |
Het |
Slmap |
A |
G |
14: 26,181,227 (GRCm39) |
F369L |
possibly damaging |
Het |
Sphk2 |
T |
C |
7: 45,361,894 (GRCm39) |
N181S |
possibly damaging |
Het |
Sqor |
A |
G |
2: 122,641,730 (GRCm39) |
T235A |
probably benign |
Het |
St13 |
A |
G |
15: 81,273,854 (GRCm39) |
L80P |
probably damaging |
Het |
St3gal6 |
A |
G |
16: 58,314,074 (GRCm39) |
Y20H |
probably benign |
Het |
Sun1 |
T |
G |
5: 139,234,239 (GRCm39) |
Y899D |
probably damaging |
Het |
Synm |
C |
T |
7: 67,385,128 (GRCm39) |
E845K |
possibly damaging |
Het |
Tg |
A |
T |
15: 66,566,633 (GRCm39) |
D1227V |
possibly damaging |
Het |
Thbs1 |
A |
G |
2: 117,945,438 (GRCm39) |
N306D |
possibly damaging |
Het |
Tmcc3 |
A |
T |
10: 94,414,357 (GRCm39) |
N51Y |
possibly damaging |
Het |
Usp4 |
A |
G |
9: 108,265,505 (GRCm39) |
D856G |
probably benign |
Het |
Vil1 |
G |
A |
1: 74,457,603 (GRCm39) |
A79T |
probably damaging |
Het |
Vmn1r119 |
T |
A |
7: 20,746,271 (GRCm39) |
H37L |
probably damaging |
Het |
Vmn2r110 |
A |
T |
17: 20,816,316 (GRCm39) |
M69K |
probably benign |
Het |
Ywhaq |
A |
G |
12: 21,444,982 (GRCm39) |
L221P |
probably damaging |
Het |
Zfp142 |
G |
A |
1: 74,609,167 (GRCm39) |
Q1543* |
probably null |
Het |
Zfp384 |
T |
A |
6: 125,001,793 (GRCm39) |
M146K |
possibly damaging |
Het |
|
Other mutations in Map4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00565:Map4
|
APN |
9 |
109,901,672 (GRCm39) |
splice site |
probably benign |
|
IGL01331:Map4
|
APN |
9 |
109,863,869 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01599:Map4
|
APN |
9 |
109,863,836 (GRCm39) |
missense |
probably benign |
0.26 |
IGL01631:Map4
|
APN |
9 |
109,892,201 (GRCm39) |
unclassified |
probably benign |
|
IGL02208:Map4
|
APN |
9 |
109,807,938 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
IGL02455:Map4
|
APN |
9 |
109,828,901 (GRCm39) |
missense |
probably benign |
0.15 |
IGL02625:Map4
|
APN |
9 |
109,893,485 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4486001:Map4
|
UTSW |
9 |
109,901,682 (GRCm39) |
missense |
probably damaging |
1.00 |
R0149:Map4
|
UTSW |
9 |
109,896,692 (GRCm39) |
missense |
probably damaging |
0.96 |
R0384:Map4
|
UTSW |
9 |
109,863,696 (GRCm39) |
missense |
probably damaging |
0.99 |
R0392:Map4
|
UTSW |
9 |
109,907,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R0496:Map4
|
UTSW |
9 |
109,868,918 (GRCm39) |
intron |
probably benign |
|
R0526:Map4
|
UTSW |
9 |
109,866,346 (GRCm39) |
splice site |
probably null |
|
R0555:Map4
|
UTSW |
9 |
109,808,171 (GRCm39) |
splice site |
probably benign |
|
R0571:Map4
|
UTSW |
9 |
109,865,834 (GRCm39) |
missense |
probably benign |
0.00 |
R0698:Map4
|
UTSW |
9 |
109,897,856 (GRCm39) |
nonsense |
probably null |
|
R0762:Map4
|
UTSW |
9 |
109,867,546 (GRCm39) |
intron |
probably benign |
|
R0862:Map4
|
UTSW |
9 |
109,808,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R0864:Map4
|
UTSW |
9 |
109,808,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R1168:Map4
|
UTSW |
9 |
109,864,032 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Map4
|
UTSW |
9 |
109,897,648 (GRCm39) |
missense |
probably benign |
0.00 |
R1735:Map4
|
UTSW |
9 |
109,864,023 (GRCm39) |
missense |
probably benign |
0.00 |
R1869:Map4
|
UTSW |
9 |
109,897,996 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1869:Map4
|
UTSW |
9 |
109,864,032 (GRCm39) |
missense |
probably benign |
0.00 |
R2196:Map4
|
UTSW |
9 |
109,900,116 (GRCm39) |
missense |
probably damaging |
1.00 |
R2264:Map4
|
UTSW |
9 |
109,910,525 (GRCm39) |
missense |
probably damaging |
1.00 |
R2507:Map4
|
UTSW |
9 |
109,866,551 (GRCm39) |
intron |
probably benign |
|
R2512:Map4
|
UTSW |
9 |
109,863,770 (GRCm39) |
missense |
possibly damaging |
0.48 |
R3087:Map4
|
UTSW |
9 |
109,882,257 (GRCm39) |
missense |
possibly damaging |
0.84 |
R3154:Map4
|
UTSW |
9 |
109,828,860 (GRCm39) |
missense |
probably benign |
0.19 |
R3498:Map4
|
UTSW |
9 |
109,864,280 (GRCm39) |
missense |
probably benign |
0.03 |
R3547:Map4
|
UTSW |
9 |
109,881,266 (GRCm39) |
missense |
possibly damaging |
0.61 |
R3751:Map4
|
UTSW |
9 |
109,867,742 (GRCm39) |
intron |
probably benign |
|
R4036:Map4
|
UTSW |
9 |
109,861,283 (GRCm39) |
missense |
possibly damaging |
0.47 |
R4423:Map4
|
UTSW |
9 |
109,896,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4505:Map4
|
UTSW |
9 |
109,861,253 (GRCm39) |
missense |
probably benign |
0.01 |
R4561:Map4
|
UTSW |
9 |
109,881,439 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4577:Map4
|
UTSW |
9 |
109,910,489 (GRCm39) |
missense |
possibly damaging |
0.48 |
R4601:Map4
|
UTSW |
9 |
109,881,887 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4795:Map4
|
UTSW |
9 |
109,864,331 (GRCm39) |
missense |
probably benign |
0.00 |
R4801:Map4
|
UTSW |
9 |
109,864,325 (GRCm39) |
missense |
probably benign |
0.15 |
R4802:Map4
|
UTSW |
9 |
109,864,325 (GRCm39) |
missense |
probably benign |
0.15 |
R4999:Map4
|
UTSW |
9 |
109,867,445 (GRCm39) |
intron |
probably benign |
|
R5020:Map4
|
UTSW |
9 |
109,897,868 (GRCm39) |
missense |
probably benign |
0.02 |
R5021:Map4
|
UTSW |
9 |
109,867,157 (GRCm39) |
nonsense |
probably null |
|
R5049:Map4
|
UTSW |
9 |
109,908,882 (GRCm39) |
nonsense |
probably null |
|
R5451:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5452:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5453:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5492:Map4
|
UTSW |
9 |
109,881,450 (GRCm39) |
missense |
possibly damaging |
0.68 |
R5532:Map4
|
UTSW |
9 |
109,863,746 (GRCm39) |
missense |
probably benign |
0.24 |
R5602:Map4
|
UTSW |
9 |
109,881,768 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5628:Map4
|
UTSW |
9 |
109,910,915 (GRCm39) |
missense |
probably benign |
0.04 |
R5896:Map4
|
UTSW |
9 |
109,901,702 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6017:Map4
|
UTSW |
9 |
109,863,687 (GRCm39) |
missense |
probably benign |
0.00 |
R6084:Map4
|
UTSW |
9 |
109,893,360 (GRCm39) |
missense |
probably damaging |
1.00 |
R6294:Map4
|
UTSW |
9 |
109,831,814 (GRCm39) |
missense |
possibly damaging |
0.82 |
R6397:Map4
|
UTSW |
9 |
109,856,784 (GRCm39) |
missense |
possibly damaging |
0.78 |
R6773:Map4
|
UTSW |
9 |
109,863,993 (GRCm39) |
missense |
probably benign |
0.00 |
R6997:Map4
|
UTSW |
9 |
109,881,982 (GRCm39) |
missense |
probably benign |
0.35 |
R7141:Map4
|
UTSW |
9 |
109,807,938 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R7187:Map4
|
UTSW |
9 |
109,882,201 (GRCm39) |
missense |
probably benign |
0.03 |
R7469:Map4
|
UTSW |
9 |
109,856,865 (GRCm39) |
splice site |
probably null |
|
R7479:Map4
|
UTSW |
9 |
109,897,892 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7487:Map4
|
UTSW |
9 |
109,856,783 (GRCm39) |
missense |
probably damaging |
1.00 |
R7690:Map4
|
UTSW |
9 |
109,828,861 (GRCm39) |
missense |
probably damaging |
0.99 |
R7780:Map4
|
UTSW |
9 |
109,863,720 (GRCm39) |
missense |
probably benign |
0.00 |
R7998:Map4
|
UTSW |
9 |
109,908,929 (GRCm39) |
missense |
probably damaging |
1.00 |
R8028:Map4
|
UTSW |
9 |
109,897,812 (GRCm39) |
missense |
probably damaging |
1.00 |
R8557:Map4
|
UTSW |
9 |
109,893,370 (GRCm39) |
splice site |
probably null |
|
R8950:Map4
|
UTSW |
9 |
109,901,702 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8972:Map4
|
UTSW |
9 |
109,864,185 (GRCm39) |
missense |
probably benign |
|
R9145:Map4
|
UTSW |
9 |
109,855,268 (GRCm39) |
missense |
probably damaging |
0.99 |
R9297:Map4
|
UTSW |
9 |
109,882,480 (GRCm39) |
missense |
probably benign |
0.02 |
R9332:Map4
|
UTSW |
9 |
109,864,223 (GRCm39) |
missense |
probably benign |
0.00 |
R9354:Map4
|
UTSW |
9 |
109,897,847 (GRCm39) |
missense |
probably benign |
|
R9419:Map4
|
UTSW |
9 |
109,882,029 (GRCm39) |
missense |
possibly damaging |
0.92 |
R9430:Map4
|
UTSW |
9 |
109,863,760 (GRCm39) |
missense |
probably benign |
0.41 |
R9437:Map4
|
UTSW |
9 |
109,864,155 (GRCm39) |
missense |
possibly damaging |
0.46 |
R9718:Map4
|
UTSW |
9 |
109,901,774 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Map4
|
UTSW |
9 |
109,897,591 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- CCAGATATAGAGCTGGGTTGC -3'
(R):5'- TCCAGTCATAAAACAAAGGAGCTTC -3'
Sequencing Primer
(F):5'- GGAAGGCTATACAGGAAACTCACC -3'
(R):5'- CTTCAATTTTCAGCCAGTGACAGGG -3'
|
Posted On |
2019-06-26 |