Incidental Mutation 'R7253:Chd4'
| ID |
568589 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Chd4
|
| Ensembl Gene |
ENSMUSG00000063870 |
| Gene Name |
chromodomain helicase DNA binding protein 4 |
| Synonyms |
D6Ertd380e, 9530019N15Rik, Mi-2beta |
| MMRRC Submission |
045314-MU
|
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
R7253 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
6 |
| Chromosomal Location |
125073144-125107554 bp(+) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
T to A
at 125083555 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000108011
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000056889]
[ENSMUST00000112390]
[ENSMUST00000112392]
|
| AlphaFold |
Q6PDQ2 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000056889
|
| SMART Domains |
Protein: ENSMUSP00000060054
Gene: ENSMUSG00000063870
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
29 |
45 |
N/A |
INTRINSIC |
|
low complexity region
|
49 |
69 |
N/A |
INTRINSIC |
|
low complexity region
|
80 |
92 |
N/A |
INTRINSIC |
|
low complexity region
|
107 |
144 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
156 |
210 |
7.7e-35 |
PFAM |
|
low complexity region
|
217 |
249 |
N/A |
INTRINSIC |
|
low complexity region
|
271 |
291 |
N/A |
INTRINSIC |
|
low complexity region
|
296 |
318 |
N/A |
INTRINSIC |
|
low complexity region
|
321 |
347 |
N/A |
INTRINSIC |
|
PHD
|
365 |
408 |
7.17e-15 |
SMART |
|
RING
|
366 |
407 |
7.46e-1 |
SMART |
|
low complexity region
|
424 |
443 |
N/A |
INTRINSIC |
|
PHD
|
444 |
487 |
4.41e-15 |
SMART |
|
RING
|
445 |
486 |
2.63e0 |
SMART |
|
CHROMO
|
492 |
572 |
8.11e-17 |
SMART |
|
CHROMO
|
613 |
670 |
1.98e-11 |
SMART |
|
low complexity region
|
675 |
694 |
N/A |
INTRINSIC |
|
DEXDc
|
715 |
927 |
2.73e-37 |
SMART |
|
low complexity region
|
1044 |
1056 |
N/A |
INTRINSIC |
|
HELICc
|
1073 |
1157 |
7.61e-27 |
SMART |
|
DUF1087
|
1282 |
1346 |
5.56e-33 |
SMART |
|
DUF1086
|
1359 |
1516 |
4.05e-108 |
SMART |
|
low complexity region
|
1526 |
1540 |
N/A |
INTRINSIC |
|
low complexity region
|
1560 |
1578 |
N/A |
INTRINSIC |
|
low complexity region
|
1590 |
1633 |
N/A |
INTRINSIC |
|
low complexity region
|
1635 |
1653 |
N/A |
INTRINSIC |
|
low complexity region
|
1661 |
1674 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1727 |
1899 |
1.9e-98 |
PFAM |
|
low complexity region
|
1903 |
1915 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000112390
|
| SMART Domains |
Protein: ENSMUSP00000108009
Gene: ENSMUSG00000063870
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
29 |
45 |
N/A |
INTRINSIC |
|
low complexity region
|
49 |
69 |
N/A |
INTRINSIC |
|
low complexity region
|
87 |
99 |
N/A |
INTRINSIC |
|
low complexity region
|
114 |
151 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
164 |
217 |
2e-28 |
PFAM |
|
low complexity region
|
224 |
256 |
N/A |
INTRINSIC |
|
low complexity region
|
278 |
298 |
N/A |
INTRINSIC |
|
low complexity region
|
303 |
325 |
N/A |
INTRINSIC |
|
low complexity region
|
328 |
354 |
N/A |
INTRINSIC |
|
PHD
|
372 |
415 |
7.17e-15 |
SMART |
|
RING
|
373 |
414 |
7.46e-1 |
SMART |
|
low complexity region
|
431 |
450 |
N/A |
INTRINSIC |
|
PHD
|
451 |
494 |
4.41e-15 |
SMART |
|
RING
|
452 |
493 |
2.63e0 |
SMART |
|
CHROMO
|
499 |
579 |
8.11e-17 |
SMART |
|
CHROMO
|
620 |
677 |
1.98e-11 |
SMART |
|
low complexity region
|
682 |
701 |
N/A |
INTRINSIC |
|
DEXDc
|
722 |
934 |
2.73e-37 |
SMART |
|
low complexity region
|
1051 |
1063 |
N/A |
INTRINSIC |
|
HELICc
|
1080 |
1164 |
7.61e-27 |
SMART |
|
DUF1087
|
1289 |
1353 |
5.56e-33 |
SMART |
|
DUF1086
|
1366 |
1523 |
4.05e-108 |
SMART |
|
low complexity region
|
1533 |
1547 |
N/A |
INTRINSIC |
|
low complexity region
|
1567 |
1585 |
N/A |
INTRINSIC |
|
low complexity region
|
1597 |
1640 |
N/A |
INTRINSIC |
|
low complexity region
|
1642 |
1660 |
N/A |
INTRINSIC |
|
low complexity region
|
1668 |
1681 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1735 |
1906 |
4.3e-90 |
PFAM |
|
low complexity region
|
1910 |
1922 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000112392
|
| SMART Domains |
Protein: ENSMUSP00000108011
Gene: ENSMUSG00000063870
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
29 |
45 |
N/A |
INTRINSIC |
|
low complexity region
|
49 |
69 |
N/A |
INTRINSIC |
|
low complexity region
|
80 |
92 |
N/A |
INTRINSIC |
|
low complexity region
|
107 |
144 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
156 |
210 |
1.1e-34 |
PFAM |
|
low complexity region
|
217 |
249 |
N/A |
INTRINSIC |
|
low complexity region
|
271 |
291 |
N/A |
INTRINSIC |
|
low complexity region
|
296 |
318 |
N/A |
INTRINSIC |
|
low complexity region
|
321 |
347 |
N/A |
INTRINSIC |
|
PHD
|
352 |
395 |
7.17e-15 |
SMART |
|
RING
|
353 |
394 |
7.46e-1 |
SMART |
|
low complexity region
|
411 |
430 |
N/A |
INTRINSIC |
|
PHD
|
431 |
474 |
4.41e-15 |
SMART |
|
RING
|
432 |
473 |
2.63e0 |
SMART |
|
CHROMO
|
479 |
559 |
8.11e-17 |
SMART |
|
CHROMO
|
600 |
657 |
1.98e-11 |
SMART |
|
low complexity region
|
662 |
681 |
N/A |
INTRINSIC |
|
DEXDc
|
702 |
914 |
2.73e-37 |
SMART |
|
low complexity region
|
1031 |
1043 |
N/A |
INTRINSIC |
|
HELICc
|
1060 |
1144 |
7.61e-27 |
SMART |
|
DUF1087
|
1269 |
1333 |
5.56e-33 |
SMART |
|
DUF1086
|
1346 |
1503 |
4.05e-108 |
SMART |
|
low complexity region
|
1513 |
1527 |
N/A |
INTRINSIC |
|
low complexity region
|
1547 |
1565 |
N/A |
INTRINSIC |
|
low complexity region
|
1577 |
1620 |
N/A |
INTRINSIC |
|
low complexity region
|
1622 |
1640 |
N/A |
INTRINSIC |
|
low complexity region
|
1648 |
1661 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1714 |
1886 |
2.8e-98 |
PFAM |
|
low complexity region
|
1890 |
1902 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.4%
|
| Validation Efficiency |
99% (74/75) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The product of this gene belongs to the SNF2/RAD54 helicase family. It represents the main component of the nucleosome remodeling and deacetylase complex and plays an important role in epigenetic transcriptional repression. Patients with dermatomyositis develop antibodies against this protein. Somatic mutations in this gene are associated with serous endometrial tumors. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2014]
PHENOTYPE: Mice homozygous for a gene trapped allele exhibit embryonic lethality between E3.5 and E4.5, absent blastocoele failure of trophectoderm function and increased apoptosis in blastocysts. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 76 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700009N14Rik |
A |
G |
4: 39,451,391 (GRCm39) |
H199R |
not run |
Het |
| Ak9 |
A |
G |
10: 41,308,480 (GRCm39) |
N1804S |
unknown |
Het |
| Akr1c21 |
C |
A |
13: 4,627,139 (GRCm39) |
T147N |
probably damaging |
Het |
| Aldh1a2 |
A |
G |
9: 71,123,216 (GRCm39) |
T30A |
probably benign |
Het |
| Alox15 |
T |
C |
11: 70,236,724 (GRCm39) |
D447G |
probably damaging |
Het |
| Amigo2 |
T |
C |
15: 97,142,956 (GRCm39) |
I489V |
probably benign |
Het |
| Ano9 |
A |
T |
7: 140,687,350 (GRCm39) |
Y322N |
probably damaging |
Het |
| Arhgap40 |
G |
T |
2: 158,389,576 (GRCm39) |
W583L |
probably benign |
Het |
| Atxn2 |
A |
G |
5: 121,916,084 (GRCm39) |
E430G |
probably damaging |
Het |
| Brip1 |
T |
C |
11: 86,034,104 (GRCm39) |
Y539C |
possibly damaging |
Het |
| C87436 |
T |
A |
6: 86,442,790 (GRCm39) |
L454Q |
probably damaging |
Het |
| Casp4 |
T |
G |
9: 5,324,868 (GRCm39) |
Y227D |
probably benign |
Het |
| Ccn6 |
T |
G |
10: 39,031,031 (GRCm39) |
N164T |
probably benign |
Het |
| Chrna10 |
A |
G |
7: 101,761,293 (GRCm39) |
C433R |
probably benign |
Het |
| Cntln |
A |
T |
4: 85,036,710 (GRCm39) |
N214I |
probably damaging |
Het |
| Colec12 |
G |
A |
18: 9,848,922 (GRCm39) |
V367I |
probably damaging |
Het |
| Cyp46a1 |
T |
C |
12: 108,318,255 (GRCm39) |
I222T |
probably benign |
Het |
| Dagla |
A |
T |
19: 10,239,945 (GRCm39) |
|
probably null |
Het |
| Dcaf7 |
C |
A |
11: 105,938,669 (GRCm39) |
|
probably null |
Het |
| Dclk2 |
C |
T |
3: 86,700,566 (GRCm39) |
R638H |
probably damaging |
Het |
| E2f7 |
A |
G |
10: 110,602,164 (GRCm39) |
|
probably null |
Het |
| Fam184a |
G |
T |
10: 53,574,901 (GRCm39) |
T236K |
probably benign |
Het |
| Glyctk |
T |
C |
9: 106,032,661 (GRCm39) |
T451A |
probably damaging |
Het |
| Hectd4 |
A |
G |
5: 121,452,944 (GRCm39) |
K484E |
possibly damaging |
Het |
| Hspbap1 |
G |
T |
16: 35,637,600 (GRCm39) |
C243F |
unknown |
Het |
| Hspg2 |
A |
C |
4: 137,247,257 (GRCm39) |
N1160T |
probably benign |
Het |
| Ighv5-8 |
C |
T |
12: 113,618,728 (GRCm39) |
L48F |
probably benign |
Het |
| Jazf1 |
C |
A |
6: 52,754,637 (GRCm39) |
E146D |
probably benign |
Het |
| Katnb1 |
C |
T |
8: 95,822,125 (GRCm39) |
Q284* |
probably null |
Het |
| Kctd18 |
G |
T |
1: 58,001,115 (GRCm39) |
Y213* |
probably null |
Het |
| Klk1b26 |
T |
C |
7: 43,664,213 (GRCm39) |
S23P |
possibly damaging |
Het |
| Krt88 |
T |
C |
15: 101,348,392 (GRCm39) |
L26P |
probably damaging |
Het |
| Lrrc8b |
G |
A |
5: 105,629,522 (GRCm39) |
V623I |
probably benign |
Het |
| Map3k4 |
T |
A |
17: 12,490,955 (GRCm39) |
M159L |
probably benign |
Het |
| Mast3 |
C |
A |
8: 71,242,326 (GRCm39) |
|
probably null |
Het |
| Mier1 |
G |
A |
4: 102,996,544 (GRCm39) |
|
probably null |
Het |
| Mrpl46 |
T |
C |
7: 78,431,207 (GRCm39) |
D117G |
probably damaging |
Het |
| Ms4a6b |
A |
G |
19: 11,497,760 (GRCm39) |
S20G |
probably benign |
Het |
| Mup10 |
A |
T |
4: 60,538,077 (GRCm39) |
M4K |
unknown |
Het |
| Nlrp5 |
C |
T |
7: 23,116,816 (GRCm39) |
A180V |
possibly damaging |
Het |
| Nlrx1 |
T |
A |
9: 44,176,001 (GRCm39) |
|
probably null |
Het |
| Odad3 |
T |
C |
9: 21,913,767 (GRCm39) |
T2A |
probably damaging |
Het |
| Or2a52 |
T |
C |
6: 43,144,744 (GRCm39) |
F251L |
probably damaging |
Het |
| Or2t45 |
T |
C |
11: 58,669,822 (GRCm39) |
Y290H |
probably damaging |
Het |
| Or4c103 |
T |
C |
2: 88,513,969 (GRCm39) |
T36A |
possibly damaging |
Het |
| Or51aa2 |
C |
T |
7: 103,187,995 (GRCm39) |
A149T |
probably benign |
Het |
| Or5af2 |
T |
A |
11: 58,708,366 (GRCm39) |
C177* |
probably null |
Het |
| Or5ak22 |
A |
G |
2: 85,229,983 (GRCm39) |
I298T |
probably benign |
Het |
| Otud1 |
C |
A |
2: 19,663,742 (GRCm39) |
D290E |
probably damaging |
Het |
| Pank4 |
A |
G |
4: 155,055,377 (GRCm39) |
N249S |
probably benign |
Het |
| Pccb |
G |
T |
9: 100,913,966 (GRCm39) |
S84R |
probably benign |
Het |
| Pemt |
A |
T |
11: 59,862,081 (GRCm39) |
H194Q |
possibly damaging |
Het |
| Phtf2 |
A |
G |
5: 20,970,856 (GRCm39) |
I634T |
possibly damaging |
Het |
| Pias2 |
T |
G |
18: 77,207,811 (GRCm39) |
I232R |
probably damaging |
Het |
| Plce1 |
A |
G |
19: 38,686,952 (GRCm39) |
E620G |
probably damaging |
Het |
| Pramel17 |
A |
T |
4: 101,692,725 (GRCm39) |
V425E |
probably benign |
Het |
| Ptpn13 |
G |
A |
5: 103,713,150 (GRCm39) |
E1758K |
possibly damaging |
Het |
| Ptprq |
T |
A |
10: 107,444,134 (GRCm39) |
Q1490L |
probably benign |
Het |
| Ptx3 |
G |
T |
3: 66,132,368 (GRCm39) |
M296I |
probably benign |
Het |
| R3hdm2 |
C |
T |
10: 127,317,644 (GRCm39) |
P464L |
probably damaging |
Het |
| Rapgef1 |
A |
G |
2: 29,589,733 (GRCm39) |
E258G |
possibly damaging |
Het |
| Rgl2 |
T |
C |
17: 34,153,964 (GRCm39) |
F457L |
possibly damaging |
Het |
| Rsf1 |
GGCGGCGGC |
GGCGGCGGCCGCGGCGGC |
7: 97,229,122 (GRCm39) |
|
probably benign |
Het |
| Senp8 |
T |
C |
9: 59,644,478 (GRCm39) |
N226S |
probably benign |
Het |
| Six5 |
C |
T |
7: 18,828,901 (GRCm39) |
R114C |
probably damaging |
Het |
| Slc10a1 |
T |
C |
12: 81,004,958 (GRCm39) |
T195A |
probably benign |
Het |
| Slpi |
G |
T |
2: 164,197,467 (GRCm39) |
Q51K |
probably benign |
Het |
| Smarca4 |
T |
C |
9: 21,570,256 (GRCm39) |
V753A |
probably benign |
Het |
| Tbc1d32 |
C |
A |
10: 56,074,537 (GRCm39) |
M225I |
probably benign |
Het |
| Tent5a |
C |
A |
9: 85,208,770 (GRCm39) |
G18C |
probably benign |
Het |
| Tnfrsf21 |
G |
A |
17: 43,348,558 (GRCm39) |
V57I |
probably benign |
Het |
| Trim44 |
G |
T |
2: 102,177,313 (GRCm39) |
P336T |
possibly damaging |
Het |
| Txlnb |
A |
G |
10: 17,703,633 (GRCm39) |
I264V |
probably damaging |
Het |
| Xirp2 |
A |
C |
2: 67,343,826 (GRCm39) |
E2022D |
probably benign |
Het |
| Zfp975 |
A |
G |
7: 42,311,036 (GRCm39) |
*526R |
probably null |
Het |
| Zp1 |
A |
G |
19: 10,893,933 (GRCm39) |
L424P |
probably damaging |
Het |
|
| Other mutations in Chd4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00573:Chd4
|
APN |
6 |
125,086,860 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00917:Chd4
|
APN |
6 |
125,081,909 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL01088:Chd4
|
APN |
6 |
125,099,431 (GRCm39) |
unclassified |
probably benign |
|
|
IGL02005:Chd4
|
APN |
6 |
125,105,779 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
IGL02405:Chd4
|
APN |
6 |
125,074,190 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL02707:Chd4
|
APN |
6 |
125,085,730 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02976:Chd4
|
APN |
6 |
125,098,331 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03001:Chd4
|
APN |
6 |
125,078,529 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
FR4304:Chd4
|
UTSW |
6 |
125,099,107 (GRCm39) |
unclassified |
probably benign |
|
|
FR4589:Chd4
|
UTSW |
6 |
125,099,102 (GRCm39) |
unclassified |
probably benign |
|
|
FR4589:Chd4
|
UTSW |
6 |
125,099,096 (GRCm39) |
missense |
probably benign |
0.02 |
|
FR4737:Chd4
|
UTSW |
6 |
125,099,094 (GRCm39) |
unclassified |
probably benign |
|
|
FR4976:Chd4
|
UTSW |
6 |
125,099,094 (GRCm39) |
unclassified |
probably benign |
|
|
R0311:Chd4
|
UTSW |
6 |
125,078,628 (GRCm39) |
missense |
probably benign |
0.15 |
|
R0414:Chd4
|
UTSW |
6 |
125,084,443 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0647:Chd4
|
UTSW |
6 |
125,086,086 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0656:Chd4
|
UTSW |
6 |
125,079,930 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1342:Chd4
|
UTSW |
6 |
125,074,151 (GRCm39) |
missense |
probably benign |
0.40 |
|
R1651:Chd4
|
UTSW |
6 |
125,100,547 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R1850:Chd4
|
UTSW |
6 |
125,098,619 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2190:Chd4
|
UTSW |
6 |
125,091,260 (GRCm39) |
missense |
probably benign |
0.18 |
|
R2192:Chd4
|
UTSW |
6 |
125,082,320 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2858:Chd4
|
UTSW |
6 |
125,081,849 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3406:Chd4
|
UTSW |
6 |
125,098,970 (GRCm39) |
missense |
probably benign |
0.09 |
|
R3431:Chd4
|
UTSW |
6 |
125,097,523 (GRCm39) |
splice site |
probably benign |
|
|
R4330:Chd4
|
UTSW |
6 |
125,078,565 (GRCm39) |
missense |
probably benign |
0.29 |
|
R4394:Chd4
|
UTSW |
6 |
125,098,581 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4538:Chd4
|
UTSW |
6 |
125,097,649 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4664:Chd4
|
UTSW |
6 |
125,078,465 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R4805:Chd4
|
UTSW |
6 |
125,105,908 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R5050:Chd4
|
UTSW |
6 |
125,084,443 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5055:Chd4
|
UTSW |
6 |
125,077,949 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R5232:Chd4
|
UTSW |
6 |
125,098,273 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5314:Chd4
|
UTSW |
6 |
125,077,551 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R5343:Chd4
|
UTSW |
6 |
125,097,326 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5502:Chd4
|
UTSW |
6 |
125,082,239 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R5613:Chd4
|
UTSW |
6 |
125,097,509 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6211:Chd4
|
UTSW |
6 |
125,078,248 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R6606:Chd4
|
UTSW |
6 |
125,086,389 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6753:Chd4
|
UTSW |
6 |
125,091,263 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6808:Chd4
|
UTSW |
6 |
125,099,086 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6939:Chd4
|
UTSW |
6 |
125,083,501 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6968:Chd4
|
UTSW |
6 |
125,085,281 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6973:Chd4
|
UTSW |
6 |
125,099,825 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6992:Chd4
|
UTSW |
6 |
125,091,339 (GRCm39) |
missense |
probably benign |
0.14 |
|
R7058:Chd4
|
UTSW |
6 |
125,085,405 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R7081:Chd4
|
UTSW |
6 |
125,106,948 (GRCm39) |
missense |
unknown |
|
|
R7423:Chd4
|
UTSW |
6 |
125,105,822 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R7535:Chd4
|
UTSW |
6 |
125,105,836 (GRCm39) |
missense |
probably benign |
0.32 |
|
R7566:Chd4
|
UTSW |
6 |
125,078,866 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R8053:Chd4
|
UTSW |
6 |
125,105,779 (GRCm39) |
nonsense |
probably null |
|
|
R8155:Chd4
|
UTSW |
6 |
125,082,287 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8711:Chd4
|
UTSW |
6 |
125,100,485 (GRCm39) |
unclassified |
probably benign |
|
|
R8783:Chd4
|
UTSW |
6 |
125,100,347 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R9020:Chd4
|
UTSW |
6 |
125,084,469 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9093:Chd4
|
UTSW |
6 |
125,090,974 (GRCm39) |
missense |
probably benign |
0.13 |
|
R9417:Chd4
|
UTSW |
6 |
125,097,688 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9509:Chd4
|
UTSW |
6 |
125,099,485 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
RF046:Chd4
|
UTSW |
6 |
125,099,094 (GRCm39) |
unclassified |
probably benign |
|
|
RF052:Chd4
|
UTSW |
6 |
125,099,108 (GRCm39) |
unclassified |
probably benign |
|
|
RF058:Chd4
|
UTSW |
6 |
125,099,094 (GRCm39) |
unclassified |
probably benign |
|
|
RF060:Chd4
|
UTSW |
6 |
125,099,108 (GRCm39) |
unclassified |
probably benign |
|
|
X0025:Chd4
|
UTSW |
6 |
125,083,430 (GRCm39) |
nonsense |
probably null |
|
|
X0027:Chd4
|
UTSW |
6 |
125,079,127 (GRCm39) |
missense |
probably damaging |
0.98 |
|
X0063:Chd4
|
UTSW |
6 |
125,090,978 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Chd4
|
UTSW |
6 |
125,078,561 (GRCm39) |
missense |
probably benign |
0.36 |
|
Z1176:Chd4
|
UTSW |
6 |
125,077,823 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAGGGCCACGTTCACTATTTAATC -3'
(R):5'- AGCTATCCACAGGCCATGAC -3'
Sequencing Primer
(F):5'- TTTAATCAAGTGGCGAGACCTGC -3'
(R):5'- ATGACTTGGAGCTTCACCATGAC -3'
|
| Posted On |
2019-08-28 |
Incidental Mutation