Mutagenetix > Incidental Mutation

Incidental Mutation 'R7097:Ccdc175'

568597

Institutional Source

Beutler Lab

Gene Symbol

Ccdc175

Ensembl Gene

ENSMUSG00000021086

Gene Name

coiled-coil domain containing 175

Synonyms

4930403N07Rik

MMRRC Submission

045189-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

R7097 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

72148074-72231803 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 72175183 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000021494 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021494]

AlphaFold

E9PVB3

Predicted Effect

probably null
Transcript: ENSMUST00000021494

SMART Domains

Protein: ENSMUSP00000021494
Gene: ENSMUSG00000021086

Domain	Start	End	E-Value	Type
coiled coil region	129	164	N/A	INTRINSIC
coiled coil region	205	235	N/A	INTRINSIC
coiled coil region	295	383	N/A	INTRINSIC
low complexity region	470	490	N/A	INTRINSIC
coiled coil region	517	537	N/A	INTRINSIC
low complexity region	803	819	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

99% (75/76)

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700010I14Rik	A	G	17: 9,224,052 (GRCm39)	N435S	probably damaging	Het
Aip	A	T	19: 4,165,381 (GRCm39)	V195E	probably benign	Het
Amer3	A	T	1: 34,627,869 (GRCm39)	I703F	probably benign	Het
Amfr	T	C	8: 94,738,637 (GRCm39)	E7G	probably benign	Het
Angel1	A	G	12: 86,773,158 (GRCm39)	S4P	probably damaging	Het
Atp2c1	A	G	9: 105,341,850 (GRCm39)	I146T	probably damaging	Het
Atp6v0e	A	G	17: 26,914,390 (GRCm39)	T72A	probably benign	Het
Bahcc1	T	C	11: 120,163,472 (GRCm39)	V590A	possibly damaging	Het
Bcl6	A	G	16: 23,791,364 (GRCm39)	V330A	possibly damaging	Het
Bcl6	T	C	16: 23,791,652 (GRCm39)	D234G	probably damaging	Het
Btaf1	C	T	19: 36,926,502 (GRCm39)	T58I	probably damaging	Het
Cdca4	C	A	12: 112,785,189 (GRCm39)	V180L	probably benign	Het
Ces1g	C	A	8: 94,043,665 (GRCm39)	G425C	possibly damaging	Het
Chl1	T	C	6: 103,683,409 (GRCm39)	L745P	probably damaging	Het
Clec4g	T	A	8: 3,769,518 (GRCm39)	T42S	possibly damaging	Het
Ctsg	A	C	14: 56,337,489 (GRCm39)	I238S	probably damaging	Het
Cyb5rl	A	T	4: 106,944,513 (GRCm39)	E41V	unknown	Het
Dcdc2a	A	G	13: 25,291,681 (GRCm39)	E222G	probably benign	Het
Dnaaf1	G	T	8: 120,323,538 (GRCm39)	G509V	possibly damaging	Het
Dnah5	A	G	15: 28,453,410 (GRCm39)	I4394V	probably benign	Het
Dot1l	T	G	10: 80,626,560 (GRCm39)	S1260R	probably damaging	Het
Dst	T	G	1: 34,208,341 (GRCm39)	I1089S	probably damaging	Het
Efcab3	A	T	11: 104,899,787 (GRCm39)	I4350F	possibly damaging	Het
Eps8l3	A	G	3: 107,791,801 (GRCm39)		probably null	Het
Fam135b	A	G	15: 71,493,917 (GRCm39)	V4A	possibly damaging	Het
Fnip2	T	C	3: 79,388,313 (GRCm39)	E806G	probably benign	Het
Fryl	T	A	5: 73,231,251 (GRCm39)	I1609F	probably benign	Het
Gdi1	G	A	X: 73,350,461 (GRCm39)	R55H	probably benign	Het
Gsn	A	T	2: 35,185,061 (GRCm39)	K339*	probably null	Het
Hecw2	T	A	1: 53,904,283 (GRCm39)	Y1155F	possibly damaging	Het
Kif20b	T	A	19: 34,951,892 (GRCm39)	N1723K	probably damaging	Het
Kif2b	T	C	11: 91,467,650 (GRCm39)	D211G	probably benign	Het
Lhfpl4	C	T	6: 113,153,632 (GRCm39)	V140I	probably benign	Het
Med16	C	T	10: 79,739,177 (GRCm39)	G203D	probably damaging	Het
Mrgpra3	T	A	7: 47,239,389 (GRCm39)	Y179F	probably benign	Het
Muc6	AGGCGCAGAAACCCTGGC	AGGC	7: 141,214,363 (GRCm39)		probably null	Het
Myo18b	A	G	5: 113,022,271 (GRCm39)	S374P	unknown	Het
Myoz1	A	G	14: 20,699,477 (GRCm39)	I287T	possibly damaging	Het
Ncoa6	T	C	2: 155,279,983 (GRCm39)	D11G	probably benign	Het
Nlrp9c	A	G	7: 26,085,046 (GRCm39)	Y178H	probably damaging	Het
Nmur1	T	C	1: 86,315,230 (GRCm39)	T212A	probably damaging	Het
Oacyl	A	G	18: 65,853,323 (GRCm39)	D143G	probably benign	Het
Obox5	A	G	7: 15,492,732 (GRCm39)	Y229C	probably damaging	Het
Or10d1c	A	T	9: 38,893,914 (GRCm39)	M142K	probably benign	Het
Or1j12	A	G	2: 36,342,702 (GRCm39)	Y35C	probably damaging	Het
Or1j18	G	T	2: 36,624,436 (GRCm39)	M34I	probably benign	Het
Or1x2	C	A	11: 50,918,428 (GRCm39)	L200I	probably benign	Het
Or8c13	A	T	9: 38,091,632 (GRCm39)	C162*	probably null	Het
Pcdhb17	A	C	18: 37,619,566 (GRCm39)	N452T	probably benign	Het
Pear1	T	G	3: 87,658,752 (GRCm39)	H901P	probably benign	Het
Peds1	C	G	2: 167,503,398 (GRCm39)	A7P	probably benign	Het
Pi16	A	G	17: 29,545,313 (GRCm39)	Y192C	probably damaging	Het
Pip5k1b	T	G	19: 24,335,424 (GRCm39)	E362D	probably damaging	Het
Pla2g5	T	C	4: 138,531,830 (GRCm39)	D58G	probably damaging	Het
Pole	T	A	5: 110,472,968 (GRCm39)		probably null	Het
Prdm16	G	T	4: 154,429,925 (GRCm39)	T348K	probably damaging	Het
Prkdc	T	A	16: 15,507,207 (GRCm39)	F896I	probably damaging	Het
Prmt7	T	C	8: 106,961,732 (GRCm39)	F215S	unknown	Het
Prss23	T	A	7: 89,159,392 (GRCm39)	T226S	probably damaging	Het
Ptpn14	G	A	1: 189,595,595 (GRCm39)	W739*	probably null	Het
Rfx5	G	T	3: 94,863,850 (GRCm39)	G135C	probably damaging	Het
Scmh1	A	G	4: 120,382,252 (GRCm39)	H573R	probably benign	Het
Serpina5	G	T	12: 104,068,554 (GRCm39)		probably null	Het
Sh3rf2	G	A	18: 42,237,227 (GRCm39)		probably null	Het
Slc38a2	T	C	15: 96,591,182 (GRCm39)	M229V	probably damaging	Het
Slc6a17	C	G	3: 107,400,464 (GRCm39)	G222R	probably damaging	Het
Sp110	C	T	1: 85,507,406 (GRCm39)	G367D	possibly damaging	Het
Srcap	C	A	7: 127,138,213 (GRCm39)	L1128M	probably damaging	Het
Tpra1	T	A	6: 88,885,276 (GRCm39)	I76N	probably damaging	Het
Trav6-4	A	T	14: 53,692,049 (GRCm39)	Y52F	probably benign	Het
Trp63	C	A	16: 25,639,227 (GRCm39)	H138Q	probably damaging	Het
Trub2	A	G	2: 29,669,838 (GRCm39)	V177A	possibly damaging	Het
Ugt2a2	T	C	5: 87,608,255 (GRCm39)	D528G	possibly damaging	Het
Wnk2	C	A	13: 49,256,314 (GRCm39)	R269L	possibly damaging	Het
Zc3h12c	T	A	9: 52,027,226 (GRCm39)	Q731L	possibly damaging	Het

Other mutations in Ccdc175

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01524:Ccdc175	APN	12	72,177,916 (GRCm39)	splice site	probably benign
IGL01805:Ccdc175	APN	12	72,176,003 (GRCm39)	splice site	probably benign
IGL01807:Ccdc175	APN	12	72,206,616 (GRCm39)	missense	probably benign	0.02
IGL01985:Ccdc175	APN	12	72,175,052 (GRCm39)	nonsense	probably null
IGL02719:Ccdc175	APN	12	72,221,899 (GRCm39)	missense	probably damaging	0.97
IGL02944:Ccdc175	APN	12	72,164,667 (GRCm39)	missense	probably benign	0.02
IGL03113:Ccdc175	APN	12	72,191,557 (GRCm39)	missense	probably benign	0.00
IGL03143:Ccdc175	APN	12	72,182,832 (GRCm39)	missense	probably benign	0.03
IGL03356:Ccdc175	APN	12	72,186,667 (GRCm39)	splice site	probably null
R0009:Ccdc175	UTSW	12	72,182,739 (GRCm39)	missense	possibly damaging	0.87
R0233:Ccdc175	UTSW	12	72,152,650 (GRCm39)	missense	probably benign	0.00
R0233:Ccdc175	UTSW	12	72,152,650 (GRCm39)	missense	probably benign	0.00
R0609:Ccdc175	UTSW	12	72,204,281 (GRCm39)	missense	probably benign	0.07
R0706:Ccdc175	UTSW	12	72,186,722 (GRCm39)	missense	probably benign	0.04
R0948:Ccdc175	UTSW	12	72,177,897 (GRCm39)	missense	probably damaging	1.00
R1054:Ccdc175	UTSW	12	72,225,318 (GRCm39)	missense	possibly damaging	0.85
R1166:Ccdc175	UTSW	12	72,152,706 (GRCm39)	missense	probably damaging	1.00
R1481:Ccdc175	UTSW	12	72,148,722 (GRCm39)	unclassified	probably benign
R1860:Ccdc175	UTSW	12	72,152,700 (GRCm39)	missense	probably benign
R2077:Ccdc175	UTSW	12	72,186,794 (GRCm39)	missense	possibly damaging	0.54
R3806:Ccdc175	UTSW	12	72,227,598 (GRCm39)	missense	possibly damaging	0.72
R3879:Ccdc175	UTSW	12	72,182,792 (GRCm39)	missense	probably damaging	1.00
R3887:Ccdc175	UTSW	12	72,182,822 (GRCm39)	missense	possibly damaging	0.65
R4557:Ccdc175	UTSW	12	72,175,080 (GRCm39)	missense	probably benign	0.08
R4585:Ccdc175	UTSW	12	72,221,953 (GRCm39)	missense	possibly damaging	0.65
R4686:Ccdc175	UTSW	12	72,159,052 (GRCm39)	missense	probably damaging	1.00
R4766:Ccdc175	UTSW	12	72,158,979 (GRCm39)	missense	probably benign	0.00
R4773:Ccdc175	UTSW	12	72,182,822 (GRCm39)	missense	probably damaging	0.99
R4909:Ccdc175	UTSW	12	72,206,527 (GRCm39)	missense	probably damaging	1.00
R4964:Ccdc175	UTSW	12	72,227,619 (GRCm39)	missense	probably damaging	1.00
R5338:Ccdc175	UTSW	12	72,231,745 (GRCm39)	missense	probably damaging	0.99
R5539:Ccdc175	UTSW	12	72,191,587 (GRCm39)	missense	probably benign	0.00
R5897:Ccdc175	UTSW	12	72,206,578 (GRCm39)	missense	probably benign	0.06
R6128:Ccdc175	UTSW	12	72,175,933 (GRCm39)	missense	probably benign	0.07
R6520:Ccdc175	UTSW	12	72,186,804 (GRCm39)	missense	probably damaging	0.98
R6523:Ccdc175	UTSW	12	72,191,565 (GRCm39)	missense	probably benign	0.01
R6917:Ccdc175	UTSW	12	72,231,679 (GRCm39)	missense	probably damaging	1.00
R7035:Ccdc175	UTSW	12	72,202,419 (GRCm39)	missense	probably benign	0.01
R7339:Ccdc175	UTSW	12	72,182,815 (GRCm39)	missense	probably damaging	1.00
R7450:Ccdc175	UTSW	12	72,202,447 (GRCm39)	missense	possibly damaging	0.93
R7481:Ccdc175	UTSW	12	72,202,398 (GRCm39)	missense	probably benign	0.00
R7676:Ccdc175	UTSW	12	72,148,821 (GRCm39)	missense	possibly damaging	0.57
R8045:Ccdc175	UTSW	12	72,202,676 (GRCm39)	intron	probably benign
R8383:Ccdc175	UTSW	12	72,155,952 (GRCm39)	missense	possibly damaging	0.95
R8470:Ccdc175	UTSW	12	72,202,392 (GRCm39)	missense	probably damaging	0.97
R9211:Ccdc175	UTSW	12	72,153,458 (GRCm39)	missense	probably damaging	1.00
R9739:Ccdc175	UTSW	12	72,186,792 (GRCm39)	missense	probably benign	0.00
Z1088:Ccdc175	UTSW	12	72,175,153 (GRCm39)	missense	probably benign	0.01
Z1176:Ccdc175	UTSW	12	72,159,082 (GRCm39)	missense	possibly damaging	0.90

Predicted Primers

PCR Primer
(F):5'- GCACGATCATGGTCACACAC -3'
(R):5'- CCCATACGTACCCTTTGGATAC -3'

Sequencing Primer
(F):5'- GATCATGGTCACACACAGTGTCTC -3'
(R):5'- GGATACAGCGGCTAATCCCTTTAG -3'

Posted On

2019-08-29