Incidental Mutation 'R7336:Wdr62'
ID 569489
Institutional Source Beutler Lab
Gene Symbol Wdr62
Ensembl Gene ENSMUSG00000037020
Gene Name WD repeat domain 62
Synonyms 2310038K02Rik
MMRRC Submission 045426-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R7336 (G1)
Quality Score 225.009
Status Validated
Chromosome 7
Chromosomal Location 29939563-29979844 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 29943342 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Glutamine at position 951 (L951Q)
Ref Sequence ENSEMBL: ENSMUSP00000103825 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000108190] [ENSMUST00000134570] [ENSMUST00000145027]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000108190
AA Change: L951Q

PolyPhen 2 Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000103825
Gene: ENSMUSG00000037020
AA Change: L951Q

DomainStartEndE-ValueType
low complexity region 27 53 N/A INTRINSIC
WD40 101 142 4.24e-3 SMART
WD40 145 186 1.03e-1 SMART
WD40 189 226 7.4e0 SMART
WD40 284 322 3.55e1 SMART
WD40 353 388 1.85e0 SMART
WD40 395 442 2.98e-1 SMART
WD40 482 521 2.77e-1 SMART
WD40 524 566 2.3e0 SMART
WD40 570 610 4.18e-2 SMART
WD40 615 657 1.54e0 SMART
WD40 660 702 8.49e-3 SMART
WD40 705 744 3.61e-6 SMART
low complexity region 763 768 N/A INTRINSIC
low complexity region 797 811 N/A INTRINSIC
low complexity region 980 987 N/A INTRINSIC
low complexity region 1215 1226 N/A INTRINSIC
low complexity region 1302 1313 N/A INTRINSIC
low complexity region 1477 1497 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000134570
AA Change: L483Q

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000116139
Gene: ENSMUSG00000037020
AA Change: L483Q

DomainStartEndE-ValueType
WD40 36 75 2.77e-1 SMART
WD40 78 120 2.3e0 SMART
WD40 124 164 4.18e-2 SMART
WD40 169 211 1.54e0 SMART
WD40 214 256 8.49e-3 SMART
WD40 259 298 3.61e-6 SMART
low complexity region 317 322 N/A INTRINSIC
low complexity region 351 365 N/A INTRINSIC
low complexity region 512 519 N/A INTRINSIC
low complexity region 744 755 N/A INTRINSIC
low complexity region 831 842 N/A INTRINSIC
low complexity region 1006 1026 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000145027
AA Change: L951Q

PolyPhen 2 Score 0.929 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000116772
Gene: ENSMUSG00000037020
AA Change: L951Q

DomainStartEndE-ValueType
low complexity region 27 53 N/A INTRINSIC
WD40 101 142 4.24e-3 SMART
WD40 145 186 1.03e-1 SMART
WD40 189 226 7.4e0 SMART
WD40 284 322 3.55e1 SMART
WD40 353 388 1.85e0 SMART
WD40 395 442 2.98e-1 SMART
WD40 482 521 2.77e-1 SMART
WD40 524 566 2.3e0 SMART
WD40 570 610 4.18e-2 SMART
WD40 615 657 1.54e0 SMART
WD40 660 702 8.49e-3 SMART
WD40 705 744 3.61e-6 SMART
low complexity region 763 768 N/A INTRINSIC
low complexity region 797 811 N/A INTRINSIC
low complexity region 980 987 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 98.9%
Validation Efficiency 99% (80/81)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is proposed to play a role in cerebral cortical development. Mutations in this gene have been associated with microencephaly, cortical malformations, and mental retardation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2011]
PHENOTYPE: Mice for a hypomorphic allele exhibit reduced brain size due to decreased neural progenitor cells. Cells show spindle instability, spindle assembly checkpoint activation, mitotic arrest and cell death. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 79 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aadacl2fm1 G A 3: 59,840,174 (GRCm39) probably null Het
Abca15 A T 7: 119,987,456 (GRCm39) Q1247H possibly damaging Het
Acsf2 G C 11: 94,462,476 (GRCm39) Q180E probably benign Het
Adamts8 A G 9: 30,873,363 (GRCm39) D856G probably benign Het
Agrn A T 4: 156,259,371 (GRCm39) C828* probably null Het
Ankub1 T C 3: 57,573,108 (GRCm39) T205A probably benign Het
Atm A T 9: 53,373,803 (GRCm39) Y2150N possibly damaging Het
Barhl1 A G 2: 28,799,855 (GRCm39) F257L probably benign Het
Bcat2 T A 7: 45,224,909 (GRCm39) C27S probably benign Het
Bod1l G A 5: 41,978,867 (GRCm39) R816C probably damaging Het
Btg3 A G 16: 78,161,695 (GRCm39) Y172H probably benign Het
Cacna1d T C 14: 29,767,239 (GRCm39) D1940G probably benign Het
Catsperg2 T A 7: 29,406,026 (GRCm39) N624I possibly damaging Het
Ccdc146 A G 5: 21,508,110 (GRCm39) V646A probably benign Het
Ccp110 C T 7: 118,321,433 (GRCm39) P363S probably damaging Het
Cct4 C A 11: 22,951,564 (GRCm39) T377K possibly damaging Het
Cemip2 C A 19: 21,803,509 (GRCm39) Y847* probably null Het
Cep350 T A 1: 155,738,022 (GRCm39) H2607L probably benign Het
Cfap46 A G 7: 139,200,020 (GRCm39) F1954L unknown Het
Chat C T 14: 32,145,213 (GRCm39) probably null Het
Clasp2 A G 9: 113,705,421 (GRCm39) probably null Het
Cldn9 T C 17: 23,901,989 (GRCm39) D212G probably benign Het
Cp G A 3: 20,018,696 (GRCm39) probably null Het
Cyfip1 T A 7: 55,576,148 (GRCm39) I1108N possibly damaging Het
Dnah14 A G 1: 181,625,299 (GRCm39) D4060G probably damaging Het
Dpyd A G 3: 118,858,570 (GRCm39) T595A probably damaging Het
Eps8 G A 6: 137,486,211 (GRCm39) R434C possibly damaging Het
Fasl A G 1: 161,615,557 (GRCm39) Y100H probably damaging Het
Fkbp9 A T 6: 56,826,712 (GRCm39) N104I probably damaging Het
Frmd4a A G 2: 4,478,025 (GRCm39) T65A possibly damaging Het
Gm1110 T C 9: 26,825,653 (GRCm39) N102S probably damaging Het
Gm2381 T C 7: 42,471,804 (GRCm39) Q25R possibly damaging Het
Gtpbp2 A G 17: 46,472,239 (GRCm39) Y58C probably damaging Het
H2-T3 C A 17: 36,498,237 (GRCm39) K269N probably damaging Het
Icosl C A 10: 77,909,707 (GRCm39) Y217* probably null Het
Il17rd G T 14: 26,809,503 (GRCm39) R153L probably benign Het
Kif17 C A 4: 138,025,617 (GRCm39) T973K possibly damaging Het
Klk1b16 A G 7: 43,790,907 (GRCm39) I236M probably benign Het
Lgmn G A 12: 102,389,998 (GRCm39) probably benign Het
Lmbr1l T C 15: 98,811,468 (GRCm39) D54G possibly damaging Het
Lrrc49 A T 9: 60,584,474 (GRCm39) I196N possibly damaging Het
Maml1 C T 11: 50,157,276 (GRCm39) A300T possibly damaging Het
Mapkap1 A T 2: 34,423,829 (GRCm39) Q293L possibly damaging Het
Mki67 T C 7: 135,315,568 (GRCm39) T69A probably benign Het
Mlph G A 1: 90,849,705 (GRCm39) probably null Het
Myh1 A T 11: 67,111,435 (GRCm39) M1625L probably benign Het
Myh3 G T 11: 66,981,847 (GRCm39) R781L probably benign Het
Nckap5 A T 1: 125,953,786 (GRCm39) I922K probably benign Het
Nlrp5 T A 7: 23,117,059 (GRCm39) M261K probably damaging Het
Or1e1d-ps1 G A 11: 73,819,663 (GRCm39) M204I probably benign Het
Or4f47 A T 2: 111,972,514 (GRCm39) S75C possibly damaging Het
Or5af1 T A 11: 58,722,750 (GRCm39) Y257N probably damaging Het
Or8g52 A G 9: 39,630,906 (GRCm39) N128D probably benign Het
Pak1 T A 7: 97,538,179 (GRCm39) V262E probably benign Het
Pigw A T 11: 84,767,930 (GRCm39) D466E probably damaging Het
Pira2 A T 7: 3,847,344 (GRCm39) L115Q probably damaging Het
Rbm15 A C 3: 107,240,432 (GRCm39) probably benign Het
Rfx1 A G 8: 84,800,385 (GRCm39) probably benign Het
Rfx7 A G 9: 72,500,639 (GRCm39) Y133C probably damaging Het
Serpinb9d T A 13: 33,384,702 (GRCm39) D226E probably benign Het
Sgk3 G A 1: 9,954,701 (GRCm39) A271T possibly damaging Het
Sh2d5 T A 4: 137,984,150 (GRCm39) C173S probably benign Het
Skint8 T C 4: 111,796,769 (GRCm39) V291A probably benign Het
Slc22a27 T A 19: 7,904,054 (GRCm39) N28Y probably benign Het
Slc25a54 G A 3: 109,023,751 (GRCm39) V449I probably benign Het
Slc39a9 T C 12: 80,726,316 (GRCm39) F255S probably damaging Het
Spata31d1c C T 13: 65,183,942 (GRCm39) H495Y probably damaging Het
Stab2 G A 10: 86,805,049 (GRCm39) Q310* probably null Het
Supt16 C A 14: 52,408,948 (GRCm39) A809S possibly damaging Het
Tenm3 A T 8: 48,689,212 (GRCm39) M2125K possibly damaging Het
Tex2 G A 11: 106,439,685 (GRCm39) T565M unknown Het
Tll1 G A 8: 64,478,176 (GRCm39) A859V probably damaging Het
Tmem106c C T 15: 97,867,512 (GRCm39) T232I possibly damaging Het
Trim65 T G 11: 116,019,116 (GRCm39) D141A probably benign Het
Trim80 T C 11: 115,332,042 (GRCm39) F78S probably damaging Het
Txnrd1 T A 10: 82,709,051 (GRCm39) I83N probably benign Het
Vnn3 G A 10: 23,727,806 (GRCm39) G72D probably benign Het
Wasl G T 6: 24,619,686 (GRCm39) P278Q unknown Het
Zfp760 C T 17: 21,942,814 (GRCm39) T663I unknown Het
Other mutations in Wdr62
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Wdr62 APN 7 29,942,948 (GRCm39) missense probably benign 0.00
IGL00428:Wdr62 APN 7 29,970,177 (GRCm39) missense probably damaging 0.99
IGL00579:Wdr62 APN 7 29,967,320 (GRCm39) missense probably damaging 1.00
IGL00709:Wdr62 APN 7 29,941,486 (GRCm39) missense probably benign 0.05
IGL00924:Wdr62 APN 7 29,942,231 (GRCm39) missense probably damaging 1.00
IGL00924:Wdr62 APN 7 29,964,643 (GRCm39) missense probably damaging 0.99
IGL00956:Wdr62 APN 7 29,960,764 (GRCm39) missense probably damaging 0.96
IGL01016:Wdr62 APN 7 29,953,676 (GRCm39) missense probably benign 0.39
IGL01118:Wdr62 APN 7 29,942,206 (GRCm39) missense probably damaging 0.96
IGL01458:Wdr62 APN 7 29,941,187 (GRCm39) missense probably benign 0.08
IGL01977:Wdr62 APN 7 29,957,526 (GRCm39) missense probably damaging 1.00
IGL02065:Wdr62 APN 7 29,942,894 (GRCm39) missense possibly damaging 0.59
IGL02155:Wdr62 APN 7 29,962,068 (GRCm39) missense probably damaging 1.00
IGL02260:Wdr62 APN 7 29,970,207 (GRCm39) missense probably damaging 1.00
IGL02404:Wdr62 APN 7 29,967,298 (GRCm39) missense probably damaging 1.00
IGL02491:Wdr62 APN 7 29,942,184 (GRCm39) missense probably benign 0.19
IGL02556:Wdr62 APN 7 29,944,709 (GRCm39) splice site probably null
IGL02739:Wdr62 APN 7 29,941,885 (GRCm39) nonsense probably null
IGL03387:Wdr62 APN 7 29,970,199 (GRCm39) missense possibly damaging 0.90
ivoire UTSW 7 29,971,045 (GRCm39) missense probably damaging 1.00
I0000:Wdr62 UTSW 7 29,944,752 (GRCm39) missense probably benign 0.03
R0304:Wdr62 UTSW 7 29,942,299 (GRCm39) missense probably benign 0.20
R0371:Wdr62 UTSW 7 29,941,583 (GRCm39) missense possibly damaging 0.56
R0400:Wdr62 UTSW 7 29,940,887 (GRCm39) missense possibly damaging 0.81
R0621:Wdr62 UTSW 7 29,953,486 (GRCm39) missense possibly damaging 0.94
R0634:Wdr62 UTSW 7 29,969,599 (GRCm39) missense probably damaging 0.98
R1758:Wdr62 UTSW 7 29,967,328 (GRCm39) missense probably damaging 1.00
R2205:Wdr62 UTSW 7 29,957,574 (GRCm39) critical splice acceptor site probably null
R2254:Wdr62 UTSW 7 29,967,328 (GRCm39) missense probably damaging 0.97
R2255:Wdr62 UTSW 7 29,967,328 (GRCm39) missense probably damaging 0.97
R2566:Wdr62 UTSW 7 29,973,424 (GRCm39) missense probably damaging 1.00
R2851:Wdr62 UTSW 7 29,960,862 (GRCm39) missense possibly damaging 0.70
R3150:Wdr62 UTSW 7 29,971,095 (GRCm39) missense possibly damaging 0.94
R4355:Wdr62 UTSW 7 29,941,673 (GRCm39) missense probably damaging 1.00
R4517:Wdr62 UTSW 7 29,969,683 (GRCm39) missense probably damaging 1.00
R4839:Wdr62 UTSW 7 29,970,111 (GRCm39) missense probably damaging 1.00
R4839:Wdr62 UTSW 7 29,940,890 (GRCm39) missense probably benign 0.00
R5193:Wdr62 UTSW 7 29,964,592 (GRCm39) missense probably damaging 0.99
R5289:Wdr62 UTSW 7 29,967,300 (GRCm39) missense probably damaging 1.00
R5306:Wdr62 UTSW 7 29,964,688 (GRCm39) missense possibly damaging 0.94
R5878:Wdr62 UTSW 7 29,940,772 (GRCm39) missense probably benign
R5942:Wdr62 UTSW 7 29,942,504 (GRCm39) nonsense probably null
R6051:Wdr62 UTSW 7 29,960,809 (GRCm39) missense possibly damaging 0.69
R6237:Wdr62 UTSW 7 29,941,860 (GRCm39) missense probably damaging 1.00
R6727:Wdr62 UTSW 7 29,971,045 (GRCm39) missense probably damaging 1.00
R7158:Wdr62 UTSW 7 29,970,163 (GRCm39) missense possibly damaging 0.77
R7208:Wdr62 UTSW 7 29,951,761 (GRCm39) missense probably damaging 0.97
R7237:Wdr62 UTSW 7 29,969,869 (GRCm39) splice site probably null
R7559:Wdr62 UTSW 7 29,970,198 (GRCm39) missense probably damaging 0.98
R7845:Wdr62 UTSW 7 29,964,667 (GRCm39) missense possibly damaging 0.79
R7936:Wdr62 UTSW 7 29,964,584 (GRCm39) missense probably damaging 1.00
R8002:Wdr62 UTSW 7 29,951,785 (GRCm39) missense probably damaging 1.00
R8347:Wdr62 UTSW 7 29,962,128 (GRCm39) missense possibly damaging 0.88
R8399:Wdr62 UTSW 7 29,957,486 (GRCm39) missense probably damaging 1.00
R8954:Wdr62 UTSW 7 29,953,454 (GRCm39) missense probably damaging 1.00
R9044:Wdr62 UTSW 7 29,962,062 (GRCm39) missense probably benign
R9166:Wdr62 UTSW 7 29,941,874 (GRCm39) missense probably damaging 1.00
R9212:Wdr62 UTSW 7 29,942,563 (GRCm39) missense probably damaging 1.00
R9748:Wdr62 UTSW 7 29,953,466 (GRCm39) missense possibly damaging 0.80
Z1176:Wdr62 UTSW 7 29,955,353 (GRCm39) missense probably benign 0.00
Z1186:Wdr62 UTSW 7 29,950,184 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CAGTTGAGCCTGTCTGAGAC -3'
(R):5'- GACTTCACACTGTGTCTGATGTG -3'

Sequencing Primer
(F):5'- TGTCTGAGACAGTCCCTCAAC -3'
(R):5'- CACACTGTGTCTGATGTGTCTGG -3'
Posted On 2019-09-13