Mutagenetix > Incidental Mutation

Incidental Mutation 'R7346:Vmn1r85'

570200

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r85

Ensembl Gene

ENSMUSG00000070817

Gene Name

vomeronasal 1 receptor 85

Synonyms

V1rj3

MMRRC Submission

045373-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

R7346 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

12818216-12819142 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 12818964 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 60 (I60T)

Ref Sequence

ENSEMBL: ENSMUSP00000148178 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000094829] [ENSMUST00000209822]

AlphaFold

Q8VIB8

Predicted Effect

probably damaging
Transcript: ENSMUST00000094829
AA Change: I60T

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000092424
Gene: ENSMUSG00000070817
AA Change: I60T

Domain	Start	End	E-Value	Type
Pfam:TAS2R	1	296	8.4e-18	PFAM
Pfam:V1R	24	298	2.5e-36	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000209822
AA Change: I60T

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.1%

Validation Efficiency

100% (71/71)

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930563M21Rik	G	A	9: 55,914,587 (GRCm39)	P52S	unknown	Het
Adarb2	A	G	13: 8,620,420 (GRCm39)	E302G	probably damaging	Het
Adgrf5	T	A	17: 43,762,070 (GRCm39)	L1255H	probably damaging	Het
Adra1a	T	A	14: 66,875,733 (GRCm39)	I236N	probably benign	Het
As3mt	T	C	19: 46,708,891 (GRCm39)	F295S	probably damaging	Het
Bmp5	G	A	9: 75,780,642 (GRCm39)	R313Q	probably damaging	Het
Ccnj	T	A	19: 40,833,394 (GRCm39)	S191T	probably benign	Het
Clk2	T	A	3: 89,080,852 (GRCm39)		probably null	Het
Cpz	T	C	5: 35,675,000 (GRCm39)	E83G	probably damaging	Het
Cts3	A	G	13: 61,715,434 (GRCm39)	I133T	probably benign	Het
Dars2	C	T	1: 160,874,342 (GRCm39)		probably null	Het
Dsel	A	T	1: 111,788,798 (GRCm39)	V579D	probably damaging	Het
Dync1h1	C	A	12: 110,602,076 (GRCm39)	A2038E	probably damaging	Het
Eaf1	A	G	14: 31,216,777 (GRCm39)		probably benign	Het
Fsip2	A	C	2: 82,828,524 (GRCm39)	I6774L	probably benign	Het
Glis2	T	C	16: 4,431,432 (GRCm39)	F320L	possibly damaging	Het
Hcar1	A	G	5: 124,017,693 (GRCm39)		probably benign	Het
Hectd1	A	T	12: 51,797,104 (GRCm39)	H2211Q	probably benign	Het
Hmcn1	A	G	1: 150,559,496 (GRCm39)	I2385T	probably damaging	Het
Ifi44	T	A	3: 151,438,094 (GRCm39)	M398L	probably benign	Het
Il16	C	T	7: 83,293,249 (GRCm39)	E1273K	probably damaging	Het
Inpp5j	G	A	11: 3,451,065 (GRCm39)	T528I	probably damaging	Het
Kbtbd6	C	T	14: 79,690,627 (GRCm39)	P441S	probably damaging	Het
Kcnt1	C	T	2: 25,753,855 (GRCm39)		probably benign	Het
Kif26b	T	C	1: 178,358,306 (GRCm39)	L139P	probably damaging	Het
Klb	C	T	5: 65,505,974 (GRCm39)	Q74*	probably null	Het
L3mbtl1	G	A	2: 162,808,926 (GRCm39)	V600I	probably benign	Het
Lcp1	C	T	14: 75,447,946 (GRCm39)	A317V	possibly damaging	Het
Lipc	C	T	9: 70,720,029 (GRCm39)	G326D	probably damaging	Het
Mbnl2	T	A	14: 120,616,694 (GRCm39)	F103I	probably benign	Het
Mdm1	G	T	10: 118,000,193 (GRCm39)	E609*	probably null	Het
Med16	A	G	10: 79,744,650 (GRCm39)		probably null	Het
Mga	T	C	2: 119,766,008 (GRCm39)	V1424A	possibly damaging	Het
Mocs2	G	T	13: 114,964,710 (GRCm39)		probably null	Het
Morc1	C	T	16: 48,451,263 (GRCm39)		probably null	Het
Mpc2	T	A	1: 165,307,080 (GRCm39)	W94R	probably damaging	Het
Mrm3	G	A	11: 76,141,002 (GRCm39)	V337I	possibly damaging	Het
N4bp3	T	C	11: 51,536,433 (GRCm39)	H133R	probably benign	Het
Ncam2	G	T	16: 81,420,256 (GRCm39)	G810V	probably damaging	Het
Nipbl	T	C	15: 8,373,090 (GRCm39)	E1052G	possibly damaging	Het
Nlrp12	C	T	7: 3,297,887 (GRCm39)	V95M	probably damaging	Het
Nrip1	T	C	16: 76,090,244 (GRCm39)	N438D	possibly damaging	Het
Nsun4	C	A	4: 115,909,035 (GRCm39)	M508I	probably benign	Het
Pla2g2c	T	C	4: 138,461,650 (GRCm39)	S40P	probably damaging	Het
Plec	A	G	15: 76,082,178 (GRCm39)		probably null	Het
Ppfia2	G	T	10: 106,693,356 (GRCm39)	M620I	possibly damaging	Het
Ppp6c	A	G	2: 39,116,229 (GRCm39)	Y9H	probably damaging	Het
Prkd1	A	T	12: 50,695,617 (GRCm39)	I47N	possibly damaging	Het
Prr14l	T	C	5: 32,988,028 (GRCm39)	D489G	probably benign	Het
Ptch2	T	A	4: 116,971,849 (GRCm39)	Y1124N	probably benign	Het
Ptpra	T	G	2: 130,395,320 (GRCm39)	Y808D	probably damaging	Het
Rint1	T	A	5: 24,020,651 (GRCm39)	F558Y	possibly damaging	Het
Rnf215	T	A	11: 4,089,792 (GRCm39)	C268*	probably null	Het
Slc25a13	T	C	6: 6,181,100 (GRCm39)	E28G	possibly damaging	Het
Slc38a8	G	T	8: 120,226,554 (GRCm39)	Y78*	probably null	Het
Slc4a7	T	C	14: 14,775,000 (GRCm38)	M810T	probably damaging	Het
Slitrk1	A	G	14: 109,150,591 (GRCm39)	V40A	possibly damaging	Het
Sobp	A	T	10: 42,898,831 (GRCm39)	S251R	probably damaging	Het
Spata31d1a	G	A	13: 59,851,015 (GRCm39)	S371L	probably benign	Het
Tada2b	T	C	5: 36,634,180 (GRCm39)	T133A	possibly damaging	Het
Tbc1d20	A	G	2: 152,146,881 (GRCm39)	D90G	probably benign	Het
Tek	T	A	4: 94,715,533 (GRCm39)	I408K	probably benign	Het
Tgfb2	A	G	1: 186,382,077 (GRCm39)	F150S	probably benign	Het
Tmem63b	T	C	17: 45,977,517 (GRCm39)	T370A	probably benign	Het
Tmem94	G	T	11: 115,677,082 (GRCm39)	R118L	possibly damaging	Het
Tspan17	C	G	13: 54,940,434 (GRCm39)	L34V	probably benign	Het
Vmn1r238	A	T	18: 3,123,151 (GRCm39)	Y88N	probably damaging	Het
Vmn2r96	T	C	17: 18,803,029 (GRCm39)	M313T	probably benign	Het
Zp3r	G	A	1: 130,511,217 (GRCm39)	S387F	probably benign	Het

Other mutations in Vmn1r85

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01099:Vmn1r85	APN	7	12,818,461 (GRCm39)	nonsense	probably null
IGL01520:Vmn1r85	APN	7	12,819,081 (GRCm39)	missense	probably damaging	1.00
IGL01803:Vmn1r85	APN	7	12,818,496 (GRCm39)	missense	probably damaging	0.98
IGL02285:Vmn1r85	APN	7	12,818,711 (GRCm39)	missense	probably damaging	1.00
IGL02852:Vmn1r85	APN	7	12,819,010 (GRCm39)	missense	possibly damaging	0.70
IGL03012:Vmn1r85	APN	7	12,818,692 (GRCm39)	missense	probably benign	0.01
R0391:Vmn1r85	UTSW	7	12,818,515 (GRCm39)	missense	probably benign	0.01
R0655:Vmn1r85	UTSW	7	12,818,650 (GRCm39)	missense	probably damaging	1.00
R1142:Vmn1r85	UTSW	7	12,818,481 (GRCm39)	missense	probably benign	0.01
R1452:Vmn1r85	UTSW	7	12,818,808 (GRCm39)	missense	probably damaging	1.00
R1942:Vmn1r85	UTSW	7	12,818,668 (GRCm39)	missense	possibly damaging	0.83
R3760:Vmn1r85	UTSW	7	12,818,932 (GRCm39)	missense	probably damaging	0.96
R4783:Vmn1r85	UTSW	7	12,818,788 (GRCm39)	missense	probably damaging	1.00
R4785:Vmn1r85	UTSW	7	12,818,788 (GRCm39)	missense	probably damaging	1.00
R5373:Vmn1r85	UTSW	7	12,818,255 (GRCm39)	nonsense	probably null
R6021:Vmn1r85	UTSW	7	12,818,616 (GRCm39)	missense	probably benign	0.00
R6035:Vmn1r85	UTSW	7	12,818,854 (GRCm39)	missense	probably damaging	1.00
R6035:Vmn1r85	UTSW	7	12,818,854 (GRCm39)	missense	probably damaging	1.00
R6834:Vmn1r85	UTSW	7	12,818,571 (GRCm39)	missense	probably damaging	1.00
R7340:Vmn1r85	UTSW	7	12,819,073 (GRCm39)	missense	probably damaging	1.00
R7836:Vmn1r85	UTSW	7	12,818,698 (GRCm39)	missense	probably benign	0.06
R7896:Vmn1r85	UTSW	7	12,818,448 (GRCm39)	missense	probably benign	0.22
R9090:Vmn1r85	UTSW	7	12,818,942 (GRCm39)	nonsense	probably null
R9271:Vmn1r85	UTSW	7	12,818,942 (GRCm39)	nonsense	probably null
R9354:Vmn1r85	UTSW	7	12,818,725 (GRCm39)	missense	probably damaging	1.00
R9713:Vmn1r85	UTSW	7	12,818,458 (GRCm39)	missense	probably damaging	1.00
R9779:Vmn1r85	UTSW	7	12,818,308 (GRCm39)	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- ACCATGTTGATGAACCAGGAAAAC -3'
(R):5'- TCCAAGCAACACTATCTTGGG -3'

Sequencing Primer
(F):5'- CGCCCACTTAGAATTACTGGGAG -3'
(R):5'- CAAGCAACACTATCTTGGGGGTTTTC -3'

Posted On

2019-09-13