Incidental Mutation 'R7361:Jmjd1c'
ID |
571349 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Jmjd1c
|
Ensembl Gene |
ENSMUSG00000037876 |
Gene Name |
jumonji domain containing 1C |
Synonyms |
D630035I23Rik, TRIP8, 5430433L24Rik |
MMRRC Submission |
045447-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.662)
|
Stock # |
R7361 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
10 |
Chromosomal Location |
66932189-67092105 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 67054143 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Lysine
at position 16
(Q16K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134246
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051446]
[ENSMUST00000173689]
[ENSMUST00000174317]
[ENSMUST00000174408]
|
AlphaFold |
Q69ZK6 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000051446
AA Change: Q303K
PolyPhen 2
Score 0.105 (Sensitivity: 0.93; Specificity: 0.86)
|
SMART Domains |
Protein: ENSMUSP00000056227 Gene: ENSMUSG00000037876 AA Change: Q303K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2236 |
N/A |
BLAST |
JmjC
|
2264 |
2488 |
3.29e-53 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000173689
AA Change: Q122K
PolyPhen 2
Score 0.105 (Sensitivity: 0.93; Specificity: 0.86)
|
SMART Domains |
Protein: ENSMUSP00000133700 Gene: ENSMUSG00000037876 AA Change: Q122K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
2056 |
N/A |
BLAST |
JmjC
|
2084 |
2308 |
3.29e-53 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000174317
AA Change: Q16K
PolyPhen 2
Score 0.105 (Sensitivity: 0.93; Specificity: 0.86)
|
SMART Domains |
Protein: ENSMUSP00000134246 Gene: ENSMUSG00000037876 AA Change: Q16K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
744 |
N/A |
BLAST |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000174408
AA Change: Q303K
PolyPhen 2
Score 0.714 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000134551 Gene: ENSMUSG00000037876 AA Change: Q303K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2237 |
N/A |
BLAST |
JmjC
|
2265 |
2489 |
3.29e-53 |
SMART |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.0%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene interacts with thyroid hormone receptors and contains a jumonji domain. It is a candidate histone demethylase and is thought to be a coactivator for key transcription factors. It plays a role in the DNA-damage response pathway by demethylating the mediator of DNA damage checkpoint 1 (MDC1) protein, and is required for the survival of acute myeloid leukemia. Mutations in this gene are associated with Rett syndrome and intellectual disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015] PHENOTYPE: Mice homozygous for a null allele exhibit an age-dependent male infertility phenotype, characterized by early loss of undifferentiated spermatogonia, and a progressive reduction in testis size/weight and male germ cells, partly due to increased male germ cell apoptosis. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 96 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A630073D07Rik |
C |
T |
6: 132,604,434 (GRCm39) |
V4I |
unknown |
Het |
Actn1 |
A |
T |
12: 80,240,489 (GRCm39) |
D199E |
probably benign |
Het |
Adam17 |
T |
C |
12: 21,375,602 (GRCm39) |
D739G |
probably damaging |
Het |
Agmat |
T |
C |
4: 141,474,163 (GRCm39) |
S15P |
probably benign |
Het |
Ahsa2 |
A |
G |
11: 23,441,099 (GRCm39) |
S229P |
probably damaging |
Het |
Arhgef3 |
A |
G |
14: 26,987,535 (GRCm39) |
D36G |
possibly damaging |
Het |
C6 |
C |
A |
15: 4,826,404 (GRCm39) |
Y662* |
probably null |
Het |
Ccs |
T |
C |
19: 4,883,378 (GRCm39) |
D140G |
probably benign |
Het |
Cdc42bpb |
A |
G |
12: 111,312,039 (GRCm39) |
L65P |
probably damaging |
Het |
Cdh24 |
A |
T |
14: 54,876,378 (GRCm39) |
V149E |
possibly damaging |
Het |
Cdk12 |
C |
A |
11: 98,101,294 (GRCm39) |
S384* |
probably null |
Het |
Cep350 |
G |
A |
1: 155,777,237 (GRCm39) |
A1701V |
probably damaging |
Het |
Ces1g |
T |
C |
8: 94,060,307 (GRCm39) |
Q104R |
not run |
Het |
Chd5 |
A |
G |
4: 152,447,745 (GRCm39) |
H537R |
probably damaging |
Het |
Cln5 |
T |
A |
14: 103,313,339 (GRCm39) |
V197D |
probably damaging |
Het |
Coq7 |
A |
G |
7: 118,128,798 (GRCm39) |
V79A |
probably benign |
Het |
Cp |
A |
T |
3: 20,018,470 (GRCm39) |
N58I |
probably benign |
Het |
Cplx2 |
A |
T |
13: 54,526,639 (GRCm39) |
M16L |
probably benign |
Het |
Crot |
A |
G |
5: 9,027,534 (GRCm39) |
L266S |
probably damaging |
Het |
Ctbs |
T |
A |
3: 146,164,509 (GRCm39) |
Y221N |
probably damaging |
Het |
Cul7 |
T |
A |
17: 46,967,933 (GRCm39) |
L707Q |
probably damaging |
Het |
D430041D05Rik |
G |
A |
2: 104,085,363 (GRCm39) |
T378I |
possibly damaging |
Het |
Dixdc1 |
T |
C |
9: 50,599,953 (GRCm39) |
I364V |
probably damaging |
Het |
Dnah11 |
T |
A |
12: 117,982,477 (GRCm39) |
H2564L |
probably damaging |
Het |
Dnajc3 |
T |
C |
14: 119,175,576 (GRCm39) |
Y26H |
probably benign |
Het |
Dpysl2 |
G |
A |
14: 67,071,664 (GRCm39) |
H159Y |
possibly damaging |
Het |
Ehmt1 |
T |
A |
2: 24,746,713 (GRCm39) |
K423I |
possibly damaging |
Het |
Eif1ad4 |
A |
G |
12: 87,862,170 (GRCm39) |
N11D |
unknown |
Het |
Enpp7 |
A |
G |
11: 118,882,985 (GRCm39) |
N353S |
probably benign |
Het |
Ext1 |
G |
A |
15: 53,208,119 (GRCm39) |
A214V |
probably damaging |
Het |
Fbh1 |
A |
T |
2: 11,751,887 (GRCm39) |
I937N |
probably damaging |
Het |
Fbxo39 |
T |
C |
11: 72,207,800 (GRCm39) |
Y51H |
possibly damaging |
Het |
Firrm |
A |
T |
1: 163,813,602 (GRCm39) |
D207E |
possibly damaging |
Het |
Fry |
A |
G |
5: 150,360,312 (GRCm39) |
H1986R |
possibly damaging |
Het |
Grem2 |
T |
C |
1: 174,664,514 (GRCm39) |
K112E |
probably benign |
Het |
Gucy1a1 |
A |
G |
3: 82,005,027 (GRCm39) |
V586A |
probably damaging |
Het |
Il12rb2 |
G |
T |
6: 67,280,450 (GRCm39) |
L586I |
possibly damaging |
Het |
Il18 |
T |
C |
9: 50,490,614 (GRCm39) |
I83T |
probably damaging |
Het |
Irs1 |
A |
T |
1: 82,266,835 (GRCm39) |
Y460* |
probably null |
Het |
Jak1 |
G |
T |
4: 101,041,536 (GRCm39) |
Q161K |
possibly damaging |
Het |
Jakmip1 |
T |
A |
5: 37,276,148 (GRCm39) |
L486Q |
probably damaging |
Het |
Kidins220 |
T |
C |
12: 25,106,999 (GRCm39) |
L1393P |
probably benign |
Het |
Klhl24 |
A |
C |
16: 19,936,750 (GRCm39) |
I453L |
probably benign |
Het |
Krtap2-4 |
C |
T |
11: 99,505,420 (GRCm39) |
D64N |
probably damaging |
Het |
Man1a |
T |
A |
10: 53,784,105 (GRCm39) |
D592V |
probably damaging |
Het |
Mepe |
T |
A |
5: 104,485,009 (GRCm39) |
Y50N |
probably benign |
Het |
Mier3 |
G |
A |
13: 111,841,783 (GRCm39) |
G115S |
possibly damaging |
Het |
Muc4 |
T |
A |
16: 32,754,670 (GRCm38) |
S1515T |
probably benign |
Het |
Nalcn |
T |
C |
14: 123,529,251 (GRCm39) |
D1408G |
probably benign |
Het |
Nav1 |
T |
C |
1: 135,380,591 (GRCm39) |
M1443V |
unknown |
Het |
Nckap1l |
A |
C |
15: 103,379,709 (GRCm39) |
N332T |
possibly damaging |
Het |
Neurl4 |
T |
A |
11: 69,802,905 (GRCm39) |
L1467Q |
probably benign |
Het |
Notch2 |
A |
G |
3: 98,038,718 (GRCm39) |
N1287S |
probably benign |
Het |
Nr4a3 |
C |
T |
4: 48,083,203 (GRCm39) |
P579S |
probably benign |
Het |
Nrxn2 |
A |
T |
19: 6,567,112 (GRCm39) |
H1329L |
probably benign |
Het |
Nynrin |
A |
T |
14: 56,107,857 (GRCm39) |
H988L |
possibly damaging |
Het |
Or1e34 |
T |
A |
11: 73,778,827 (GRCm39) |
I124F |
probably damaging |
Het |
Or4c31 |
A |
G |
2: 88,291,836 (GRCm39) |
T70A |
probably benign |
Het |
Or4c3d |
A |
G |
2: 89,882,089 (GRCm39) |
I193T |
probably benign |
Het |
Or52e3 |
G |
T |
7: 102,869,830 (GRCm39) |
D302Y |
possibly damaging |
Het |
Or7g35 |
T |
A |
9: 19,495,856 (GRCm39) |
F8I |
probably benign |
Het |
Pclo |
G |
A |
5: 14,843,882 (GRCm39) |
S1534N |
probably damaging |
Het |
Pign |
A |
G |
1: 105,512,778 (GRCm39) |
V635A |
probably benign |
Het |
Pkhd1 |
T |
C |
1: 20,664,177 (GRCm39) |
T134A |
probably damaging |
Het |
Plcb4 |
A |
T |
2: 135,818,068 (GRCm39) |
N790I |
possibly damaging |
Het |
Plxna2 |
G |
T |
1: 194,482,087 (GRCm39) |
C1453F |
probably damaging |
Het |
Plxna4 |
A |
G |
6: 32,173,057 (GRCm39) |
|
probably null |
Het |
Pnpla2 |
A |
G |
7: 141,037,344 (GRCm39) |
I116V |
possibly damaging |
Het |
Polq |
A |
G |
16: 36,880,790 (GRCm39) |
T985A |
probably benign |
Het |
Pramel11 |
T |
C |
4: 143,622,456 (GRCm39) |
T300A |
possibly damaging |
Het |
Prex1 |
T |
C |
2: 166,555,490 (GRCm39) |
N50S |
probably benign |
Het |
Ptgfrn |
G |
A |
3: 100,984,760 (GRCm39) |
A144V |
probably benign |
Het |
Rad54b |
G |
A |
4: 11,599,782 (GRCm39) |
G329S |
probably damaging |
Het |
Rrbp1 |
A |
G |
2: 143,809,364 (GRCm39) |
L931S |
probably benign |
Het |
Saxo4 |
T |
G |
19: 10,456,943 (GRCm39) |
D134A |
probably damaging |
Het |
Sipa1l2 |
A |
G |
8: 126,180,071 (GRCm39) |
S1109P |
probably damaging |
Het |
Slc26a7 |
G |
T |
4: 14,546,305 (GRCm39) |
N341K |
probably damaging |
Het |
Smg1 |
A |
C |
7: 117,784,200 (GRCm39) |
D958E |
unknown |
Het |
Smg6 |
T |
A |
11: 74,820,979 (GRCm39) |
S417T |
probably benign |
Het |
Srgap3 |
A |
G |
6: 112,723,882 (GRCm39) |
V550A |
probably damaging |
Het |
Terb1 |
T |
A |
8: 105,195,431 (GRCm39) |
D570V |
probably damaging |
Het |
Tet3 |
A |
G |
6: 83,345,076 (GRCm39) |
V1787A |
probably benign |
Het |
Tor1a |
A |
T |
2: 30,853,753 (GRCm39) |
D192E |
probably benign |
Het |
Tpr |
T |
C |
1: 150,323,372 (GRCm39) |
S2379P |
possibly damaging |
Het |
Trip12 |
A |
T |
1: 84,728,163 (GRCm39) |
F1138L |
probably damaging |
Het |
Trpv1 |
T |
C |
11: 73,151,203 (GRCm39) |
L797P |
probably damaging |
Het |
Tut1 |
T |
C |
19: 8,942,698 (GRCm39) |
L595P |
probably damaging |
Het |
Ubl7 |
T |
C |
9: 57,821,905 (GRCm39) |
S85P |
probably damaging |
Het |
Urb1 |
C |
A |
16: 90,571,656 (GRCm39) |
S1051I |
probably damaging |
Het |
Usp17le |
A |
G |
7: 104,418,084 (GRCm39) |
W353R |
probably damaging |
Het |
Usp44 |
T |
C |
10: 93,682,330 (GRCm39) |
L260S |
probably benign |
Het |
Wsb1 |
T |
A |
11: 79,131,623 (GRCm39) |
|
probably null |
Het |
Xrcc2 |
A |
T |
5: 25,897,755 (GRCm39) |
C65S |
probably damaging |
Het |
Zfp316 |
T |
A |
5: 143,240,430 (GRCm39) |
M530L |
probably benign |
Het |
Zfp473 |
T |
C |
7: 44,382,563 (GRCm39) |
H590R |
probably damaging |
Het |
Zfp983 |
T |
A |
17: 21,880,850 (GRCm39) |
H259Q |
probably damaging |
Het |
|
Other mutations in Jmjd1c |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01062:Jmjd1c
|
APN |
10 |
67,062,494 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Jmjd1c
|
APN |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01753:Jmjd1c
|
APN |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02081:Jmjd1c
|
APN |
10 |
67,055,305 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02128:Jmjd1c
|
APN |
10 |
67,079,648 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02134:Jmjd1c
|
APN |
10 |
67,056,171 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL02215:Jmjd1c
|
APN |
10 |
67,056,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02408:Jmjd1c
|
APN |
10 |
67,062,161 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02502:Jmjd1c
|
APN |
10 |
67,061,640 (GRCm39) |
missense |
probably benign |
0.13 |
IGL02546:Jmjd1c
|
APN |
10 |
67,061,115 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02943:Jmjd1c
|
APN |
10 |
67,055,433 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03171:Jmjd1c
|
APN |
10 |
67,061,277 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL03261:Jmjd1c
|
APN |
10 |
67,067,849 (GRCm39) |
missense |
probably damaging |
0.99 |
Accordion
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
PIT4378001:Jmjd1c
|
UTSW |
10 |
67,065,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0126:Jmjd1c
|
UTSW |
10 |
67,055,105 (GRCm39) |
missense |
probably damaging |
0.98 |
R0133:Jmjd1c
|
UTSW |
10 |
67,076,587 (GRCm39) |
missense |
probably benign |
0.22 |
R0201:Jmjd1c
|
UTSW |
10 |
67,054,888 (GRCm39) |
missense |
unknown |
|
R0396:Jmjd1c
|
UTSW |
10 |
67,055,302 (GRCm39) |
missense |
possibly damaging |
0.82 |
R0401:Jmjd1c
|
UTSW |
10 |
67,056,161 (GRCm39) |
missense |
probably damaging |
1.00 |
R0452:Jmjd1c
|
UTSW |
10 |
67,091,261 (GRCm39) |
missense |
probably benign |
0.28 |
R0488:Jmjd1c
|
UTSW |
10 |
67,076,506 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Jmjd1c
|
UTSW |
10 |
67,061,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R0555:Jmjd1c
|
UTSW |
10 |
67,061,568 (GRCm39) |
missense |
probably benign |
0.01 |
R0673:Jmjd1c
|
UTSW |
10 |
67,062,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R0718:Jmjd1c
|
UTSW |
10 |
67,054,725 (GRCm39) |
splice site |
probably null |
|
R0755:Jmjd1c
|
UTSW |
10 |
66,932,378 (GRCm39) |
intron |
probably benign |
|
R1142:Jmjd1c
|
UTSW |
10 |
67,061,124 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Jmjd1c
|
UTSW |
10 |
67,075,015 (GRCm39) |
splice site |
probably benign |
|
R1413:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R1619:Jmjd1c
|
UTSW |
10 |
67,055,654 (GRCm39) |
missense |
probably benign |
0.25 |
R1676:Jmjd1c
|
UTSW |
10 |
67,060,588 (GRCm39) |
missense |
probably benign |
0.02 |
R1751:Jmjd1c
|
UTSW |
10 |
67,061,469 (GRCm39) |
missense |
probably benign |
|
R1950:Jmjd1c
|
UTSW |
10 |
67,075,701 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1968:Jmjd1c
|
UTSW |
10 |
67,061,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R2049:Jmjd1c
|
UTSW |
10 |
66,993,777 (GRCm39) |
nonsense |
probably null |
|
R2061:Jmjd1c
|
UTSW |
10 |
67,054,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R2202:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2203:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2256:Jmjd1c
|
UTSW |
10 |
67,061,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R2312:Jmjd1c
|
UTSW |
10 |
67,074,629 (GRCm39) |
missense |
probably damaging |
0.98 |
R2349:Jmjd1c
|
UTSW |
10 |
67,091,279 (GRCm39) |
missense |
probably benign |
|
R2392:Jmjd1c
|
UTSW |
10 |
67,065,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R3015:Jmjd1c
|
UTSW |
10 |
66,993,711 (GRCm39) |
missense |
probably damaging |
1.00 |
R3110:Jmjd1c
|
UTSW |
10 |
67,075,863 (GRCm39) |
splice site |
probably benign |
|
R4043:Jmjd1c
|
UTSW |
10 |
67,055,245 (GRCm39) |
missense |
possibly damaging |
0.55 |
R4097:Jmjd1c
|
UTSW |
10 |
67,054,787 (GRCm39) |
missense |
probably benign |
0.09 |
R4118:Jmjd1c
|
UTSW |
10 |
67,055,532 (GRCm39) |
missense |
probably damaging |
0.96 |
R4193:Jmjd1c
|
UTSW |
10 |
66,932,460 (GRCm39) |
intron |
probably benign |
|
R4352:Jmjd1c
|
UTSW |
10 |
67,080,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4577:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R4630:Jmjd1c
|
UTSW |
10 |
66,993,753 (GRCm39) |
nonsense |
probably null |
|
R4717:Jmjd1c
|
UTSW |
10 |
66,993,830 (GRCm39) |
nonsense |
probably null |
|
R4741:Jmjd1c
|
UTSW |
10 |
67,060,718 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4774:Jmjd1c
|
UTSW |
10 |
67,060,571 (GRCm39) |
missense |
possibly damaging |
0.45 |
R4836:Jmjd1c
|
UTSW |
10 |
67,069,225 (GRCm39) |
missense |
probably benign |
0.21 |
R4914:Jmjd1c
|
UTSW |
10 |
67,054,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R4939:Jmjd1c
|
UTSW |
10 |
67,081,916 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5211:Jmjd1c
|
UTSW |
10 |
67,067,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R5215:Jmjd1c
|
UTSW |
10 |
67,076,480 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5514:Jmjd1c
|
UTSW |
10 |
67,053,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R5530:Jmjd1c
|
UTSW |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
R5624:Jmjd1c
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
R5640:Jmjd1c
|
UTSW |
10 |
67,061,857 (GRCm39) |
missense |
probably benign |
0.10 |
R5654:Jmjd1c
|
UTSW |
10 |
67,065,785 (GRCm39) |
missense |
probably benign |
0.10 |
R5742:Jmjd1c
|
UTSW |
10 |
67,056,112 (GRCm39) |
missense |
probably benign |
0.02 |
R5764:Jmjd1c
|
UTSW |
10 |
67,062,291 (GRCm39) |
missense |
probably damaging |
1.00 |
R6118:Jmjd1c
|
UTSW |
10 |
67,075,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R6163:Jmjd1c
|
UTSW |
10 |
67,083,827 (GRCm39) |
missense |
possibly damaging |
0.46 |
R6256:Jmjd1c
|
UTSW |
10 |
67,056,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6266:Jmjd1c
|
UTSW |
10 |
67,085,439 (GRCm39) |
missense |
probably damaging |
0.96 |
R6358:Jmjd1c
|
UTSW |
10 |
67,061,718 (GRCm39) |
missense |
probably benign |
|
R6430:Jmjd1c
|
UTSW |
10 |
67,059,939 (GRCm39) |
missense |
possibly damaging |
0.87 |
R6455:Jmjd1c
|
UTSW |
10 |
67,061,795 (GRCm39) |
missense |
probably benign |
0.10 |
R6887:Jmjd1c
|
UTSW |
10 |
67,025,599 (GRCm39) |
missense |
possibly damaging |
0.74 |
R6895:Jmjd1c
|
UTSW |
10 |
67,052,869 (GRCm39) |
missense |
probably benign |
0.00 |
R7041:Jmjd1c
|
UTSW |
10 |
67,056,388 (GRCm39) |
missense |
possibly damaging |
0.90 |
R7095:Jmjd1c
|
UTSW |
10 |
67,055,411 (GRCm39) |
missense |
probably benign |
0.39 |
R7113:Jmjd1c
|
UTSW |
10 |
66,993,780 (GRCm39) |
missense |
probably damaging |
0.98 |
R7225:Jmjd1c
|
UTSW |
10 |
67,061,844 (GRCm39) |
missense |
probably benign |
0.00 |
R7249:Jmjd1c
|
UTSW |
10 |
67,025,596 (GRCm39) |
missense |
probably benign |
0.01 |
R7383:Jmjd1c
|
UTSW |
10 |
67,025,537 (GRCm39) |
missense |
probably benign |
0.14 |
R7460:Jmjd1c
|
UTSW |
10 |
67,052,815 (GRCm39) |
missense |
probably benign |
0.24 |
R7475:Jmjd1c
|
UTSW |
10 |
67,061,092 (GRCm39) |
missense |
probably benign |
0.22 |
R7502:Jmjd1c
|
UTSW |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
0.99 |
R7699:Jmjd1c
|
UTSW |
10 |
67,054,195 (GRCm39) |
missense |
probably benign |
0.10 |
R7745:Jmjd1c
|
UTSW |
10 |
67,052,824 (GRCm39) |
missense |
probably damaging |
0.96 |
R7897:Jmjd1c
|
UTSW |
10 |
67,075,644 (GRCm39) |
missense |
probably damaging |
0.96 |
R7908:Jmjd1c
|
UTSW |
10 |
67,061,621 (GRCm39) |
missense |
probably benign |
|
R7911:Jmjd1c
|
UTSW |
10 |
67,067,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R7967:Jmjd1c
|
UTSW |
10 |
67,085,461 (GRCm39) |
missense |
probably damaging |
1.00 |
R8058:Jmjd1c
|
UTSW |
10 |
67,090,274 (GRCm39) |
missense |
not run |
|
R8224:Jmjd1c
|
UTSW |
10 |
67,080,628 (GRCm39) |
missense |
noncoding transcript |
|
R8251:Jmjd1c
|
UTSW |
10 |
67,075,068 (GRCm39) |
missense |
noncoding transcript |
|
R8797:Jmjd1c
|
UTSW |
10 |
67,060,616 (GRCm39) |
missense |
probably benign |
|
R8833:Jmjd1c
|
UTSW |
10 |
67,054,162 (GRCm39) |
missense |
probably benign |
0.03 |
R9262:Jmjd1c
|
UTSW |
10 |
67,083,793 (GRCm39) |
missense |
probably benign |
0.39 |
R9354:Jmjd1c
|
UTSW |
10 |
67,059,875 (GRCm39) |
missense |
probably damaging |
0.99 |
R9373:Jmjd1c
|
UTSW |
10 |
66,932,495 (GRCm39) |
intron |
probably benign |
|
R9477:Jmjd1c
|
UTSW |
10 |
66,993,734 (GRCm39) |
nonsense |
probably null |
|
R9519:Jmjd1c
|
UTSW |
10 |
66,993,798 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9701:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9802:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
RF011:Jmjd1c
|
UTSW |
10 |
67,055,978 (GRCm39) |
missense |
possibly damaging |
0.47 |
Z1088:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1176:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1177:Jmjd1c
|
UTSW |
10 |
67,081,904 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- GCACTGTTCACGTATGTATGTT -3'
(R):5'- TGTCACCACGTGCTTGTTCT -3'
Sequencing Primer
(F):5'- TTTTAGGGTCATTATACACGT -3'
(R):5'- GATCTCTGAGTCTGACACTAGCCAG -3'
|
Posted On |
2019-09-13 |