Mutagenetix > Incidental Mutation

Incidental Mutation 'R7419:Lama1'

575576

Institutional Source

Beutler Lab

Gene Symbol

Lama1

Ensembl Gene

ENSMUSG00000032796

Gene Name

laminin, alpha 1

Synonyms

Lama

MMRRC Submission

045497-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R7419 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

68004254-68129642 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 68024169 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Arginine at position 89 (I89R)

Ref Sequence

ENSEMBL: ENSMUSP00000043957 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035471]

AlphaFold

no structure available at present

Predicted Effect

SMART Domains

Protein: ENSMUSP00000043957
Gene: ENSMUSG00000032796
AA Change: I89R

Domain	Start	End	E-Value	Type
low complexity region	3	22	N/A	INTRINSIC
LamNT	23	275	1.2e-131	SMART
EGF_Lam	277	331	1e-5	SMART
EGF_Lam	334	401	6.6e-6	SMART
EGF_Lam	404	458	9.11e-9	SMART
EGF_Lam	461	507	8.12e-6	SMART
LamB	570	702	2.09e-57	SMART
EGF_like	715	746	3.36e0	SMART
EGF_Lam	749	795	7.01e-10	SMART
EGF_Lam	798	853	3.59e-7	SMART
EGF_Lam	856	906	1.53e-10	SMART
EGF_Lam	909	955	1.13e-13	SMART
EGF_Lam	958	1002	1.36e-7	SMART
EGF_Lam	1005	1048	7.29e-8	SMART
EGF_like	1034	1082	4.83e1	SMART
EGF_Lam	1051	1094	1.67e-7	SMART
EGF_Lam	1097	1154	1.32e-5	SMART
LamB	1220	1352	8.7e-46	SMART
Pfam:Laminin_EGF	1367	1397	1.7e-6	PFAM
EGF_Lam	1410	1456	7.12e-11	SMART
EGF_Lam	1459	1513	3.25e-5	SMART
EGF_like	1497	1547	6.41e1	SMART
EGF_Lam	1516	1560	1.71e-13	SMART
Pfam:Laminin_I	1574	1838	1.7e-91	PFAM
low complexity region	2012	2031	N/A	INTRINSIC
low complexity region	2087	2098	N/A	INTRINSIC
LamG	2145	2287	3.66e-30	SMART
LamG	2332	2473	5.98e-35	SMART
LamG	2513	2661	1.11e-29	SMART
low complexity region	2695	2708	N/A	INTRINSIC
LamG	2743	2877	9.72e-35	SMART
LamG	2920	3056	4.63e-41	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 98.9%

Validation Efficiency

99% (93/94)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes one of the alpha 1 subunits of laminin. The laminins are a family of extracellular matrix glycoproteins that have a heterotrimeric structure consisting of an alpha, beta and gamma chain. These proteins make up a major component of the basement membrane and have been implicated in a wide variety of biological processes including cell adhesion, differentiation, migration, signaling, neurite outgrowth and metastasis. Mutations in this gene may be associated with Poretti-Boltshauser syndrome. [provided by RefSeq, Sep 2014]
PHENOTYPE: Homozygous null mice display embryonic lethality before somite formation with impaired formation of Reichert's membrane. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 94 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	T	C	11: 9,226,959 (GRCm39)	S572P	probably damaging	Het
Abca13	T	C	11: 9,247,833 (GRCm39)	Y2527H	probably damaging	Het
Abcc5	A	G	16: 20,241,173 (GRCm39)	I4T	possibly damaging	Het
Adamts12	C	T	15: 11,317,365 (GRCm39)	T1355I	probably benign	Het
Aloxe3	A	G	11: 69,018,353 (GRCm39)	T117A	probably benign	Het
Asb15	A	G	6: 24,556,555 (GRCm39)	I17V	probably benign	Het
Atf2	A	G	2: 73,672,777 (GRCm39)	V194A	probably benign	Het
Capn7	T	C	14: 31,071,779 (GRCm39)	V221A	probably benign	Het
Ccdc107	A	T	4: 43,493,512 (GRCm39)	S28C	probably benign	Het
Cct4	C	T	11: 22,946,420 (GRCm39)	T162I	probably benign	Het
Cdc40	A	T	10: 40,717,439 (GRCm39)	H417Q	probably damaging	Het
Celf1	A	G	2: 90,833,588 (GRCm39)	I115V	probably benign	Het
Ces3a	A	G	8: 105,783,056 (GRCm39)	Y395C	probably damaging	Het
Cfh	C	A	1: 140,033,204 (GRCm39)	C798F	probably damaging	Het
Clstn3	T	C	6: 124,435,088 (GRCm39)	T313A	probably benign	Het
Crmp1	T	A	5: 37,436,229 (GRCm39)	M329K	probably benign	Het
Csf2ra	C	T	19: 61,215,491 (GRCm39)	A76T	possibly damaging	Het
Cspg4	T	A	9: 56,795,727 (GRCm39)	V1154E	possibly damaging	Het
Cyp2a4	A	T	7: 26,014,188 (GRCm39)	N455I	probably benign	Het
Cyp4a32	T	G	4: 115,468,234 (GRCm39)	M268R	probably benign	Het
Dcaf13	T	A	15: 38,993,615 (GRCm39)	I236N	probably damaging	Het
Dennd2a	A	G	6: 39,500,397 (GRCm39)	I56T	probably damaging	Het
Eif2d	T	A	1: 131,098,793 (GRCm39)	S530R	probably benign	Het
Ep300	T	A	15: 81,532,715 (GRCm39)	M1651K	unknown	Het
Epha3	G	A	16: 63,418,657 (GRCm39)	T596I	probably damaging	Het
Fam171a2	C	T	11: 102,329,628 (GRCm39)	C377Y	possibly damaging	Het
Fat4	T	A	3: 39,054,385 (GRCm39)	N4142K	probably damaging	Het
Galnt5	C	A	2: 57,904,937 (GRCm39)	S500Y	probably damaging	Het
Gas6	A	G	8: 13,521,456 (GRCm39)	V431A	probably benign	Het
Gm7544	C	T	1: 82,933,502 (GRCm39)	C56Y	unknown	Het
Golgb1	T	A	16: 36,733,281 (GRCm39)	L884I	possibly damaging	Het
Gpatch2l	T	G	12: 86,312,025 (GRCm39)		probably null	Het
Gpr33	T	C	12: 52,070,050 (GRCm39)	T330A	probably benign	Het
H2bw2	G	A	X: 135,828,471 (GRCm39)	R120K	unknown	Het
Ifi205	A	G	1: 173,855,874 (GRCm39)	M52T	possibly damaging	Het
Ino80	A	T	2: 119,210,495 (GRCm39)	D1346E	probably benign	Het
Ino80c	T	C	18: 24,241,836 (GRCm39)	K183R	unknown	Het
Itgal	G	T	7: 126,906,047 (GRCm39)	R379L	probably benign	Het
Itih3	T	A	14: 30,636,730 (GRCm39)	T582S	probably benign	Het
Kcnb2	T	C	1: 15,781,251 (GRCm39)	S708P	possibly damaging	Het
Kcnt1	A	T	2: 25,806,011 (GRCm39)	Y1200F	probably benign	Het
L3mbtl4	G	A	17: 68,948,537 (GRCm39)	D473N	probably benign	Het
Lama2	A	G	10: 27,142,630 (GRCm39)	I616T	probably benign	Het
Lipm	A	C	19: 34,093,881 (GRCm39)	D266A	probably benign	Het
Lrrc4c	A	T	2: 97,460,106 (GRCm39)	H244L	probably benign	Het
Lrrtm3	T	C	10: 63,923,925 (GRCm39)	E414G	probably damaging	Het
Ltbp4	A	G	7: 27,029,192 (GRCm39)	V231A	unknown	Het
Me3	G	T	7: 89,385,927 (GRCm39)	R92L	probably damaging	Het
Mroh7	T	G	4: 106,541,115 (GRCm39)	I1175L	probably benign	Het
Muc16	A	G	9: 18,553,258 (GRCm39)	M4345T	probably benign	Het
Mug2	A	G	6: 122,017,529 (GRCm39)	Y422C	possibly damaging	Het
N6amt1	T	G	16: 87,164,454 (GRCm39)	S214A	possibly damaging	Het
Ogfrl1	G	A	1: 23,422,063 (GRCm39)	Q24*	probably null	Het
Or12e14	A	T	2: 87,677,406 (GRCm39)	T264S	probably benign	Het
Or1ad6	T	A	11: 50,860,152 (GRCm39)	Y102*	probably null	Het
Or2ag2b	T	C	7: 106,417,551 (GRCm39)	L87P	possibly damaging	Het
Or4f14	G	A	2: 111,742,435 (GRCm39)	P280L	probably damaging	Het
Or4k6	A	C	14: 50,475,448 (GRCm39)	V298G	possibly damaging	Het
Or4x13	A	G	2: 90,231,803 (GRCm39)	D266G	probably damaging	Het
Or6b6	A	G	7: 106,571,353 (GRCm39)	M66T	probably benign	Het
Or7g23	A	C	9: 19,086,642 (GRCm39)	M110R	possibly damaging	Het
Or8g23	T	A	9: 38,971,465 (GRCm39)	I166L	probably benign	Het
Or8k3	C	T	2: 86,058,557 (GRCm39)	G253R	probably damaging	Het
Oser1	A	T	2: 163,253,364 (GRCm39)	D48E	probably benign	Het
Piwil4	G	A	9: 14,613,691 (GRCm39)	P867L	probably damaging	Het
Pla2g6	C	T	15: 79,189,898 (GRCm39)		probably null	Het
Plxna1	A	G	6: 89,334,584 (GRCm39)	L15P	unknown	Het
Ppan	C	T	9: 20,803,140 (GRCm39)	T404I	probably benign	Het
Pros1	C	A	16: 62,748,433 (GRCm39)	Y635*	probably null	Het
Rabep2	G	A	7: 126,043,342 (GRCm39)	R414Q	probably benign	Het
Rbms3	T	A	9: 116,651,894 (GRCm39)	E201V	probably damaging	Het
Robo4	A	C	9: 37,314,105 (GRCm39)	I119L	probably benign	Het
S100b	A	T	10: 76,095,820 (GRCm39)	D66V	probably damaging	Het
Serpina1f	A	G	12: 103,656,101 (GRCm39)	S376P	probably damaging	Het
Slc24a4	T	C	12: 102,193,350 (GRCm39)		probably null	Het
Slc30a6	T	C	17: 74,730,424 (GRCm39)	V438A	probably benign	Het
Sobp	A	G	10: 42,897,804 (GRCm39)	S594P	probably benign	Het
Tcstv1b	A	G	13: 120,634,994 (GRCm39)	E92G	probably damaging	Het
Tmem45b	T	C	9: 31,339,334 (GRCm39)	D213G	probably benign	Het
Topbp1	T	A	9: 103,200,543 (GRCm39)	D525E	probably benign	Het
Trim30c	G	T	7: 104,037,472 (GRCm39)	L165I	probably benign	Het
Unc13b	A	T	4: 43,174,023 (GRCm39)	D1617V	unknown	Het
Ush1c	A	G	7: 45,878,679 (GRCm39)	L112P	probably damaging	Het
Vipr1	T	A	9: 121,490,539 (GRCm39)	I195N	probably damaging	Het
Vmn2r38	A	C	7: 9,078,354 (GRCm39)	V676G	probably damaging	Het
Vmn2r87	A	T	10: 130,307,992 (GRCm39)	Y749N	probably damaging	Het
Vps13d	A	T	4: 144,842,073 (GRCm39)	S2615R		Het
Whrn	A	G	4: 63,334,330 (GRCm39)	V828A	possibly damaging	Het
Zbp1	A	G	2: 173,050,958 (GRCm39)	V304A	probably benign	Het
Zeb2	A	T	2: 44,886,359 (GRCm39)	N899K	probably benign	Het
Zfp148	T	C	16: 33,317,511 (GRCm39)	S728P	possibly damaging	Het
Zfp518a	T	A	19: 40,902,207 (GRCm39)	I712N	possibly damaging	Het
Zfp683	T	C	4: 133,786,211 (GRCm39)	V446A	probably benign	Het
Zranb3	A	T	1: 127,891,588 (GRCm39)	V796D	possibly damaging	Het

Other mutations in Lama1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00157:Lama1	APN	17	68,122,923 (GRCm39)	missense	probably benign
IGL00336:Lama1	APN	17	68,120,943 (GRCm39)	missense	probably benign	0.07
IGL01066:Lama1	APN	17	68,050,321 (GRCm39)	missense	probably damaging	1.00
IGL01140:Lama1	APN	17	68,109,928 (GRCm39)	missense	probably benign	0.14
IGL01291:Lama1	APN	17	68,045,865 (GRCm39)	missense	probably damaging	1.00
IGL01296:Lama1	APN	17	68,052,046 (GRCm39)	missense	probably benign	0.27
IGL01317:Lama1	APN	17	68,125,696 (GRCm39)	missense	probably damaging	1.00
IGL01490:Lama1	APN	17	68,057,579 (GRCm39)	missense	possibly damaging	0.54
IGL01506:Lama1	APN	17	68,092,065 (GRCm39)	missense	probably benign	0.01
IGL01508:Lama1	APN	17	68,116,356 (GRCm39)	splice site	probably benign
IGL01522:Lama1	APN	17	68,059,769 (GRCm39)	splice site	probably benign
IGL01530:Lama1	APN	17	68,103,785 (GRCm39)	missense	probably benign	0.02
IGL01541:Lama1	APN	17	68,092,065 (GRCm39)	missense	probably benign	0.01
IGL01677:Lama1	APN	17	68,086,143 (GRCm39)	missense	probably benign	0.15
IGL01886:Lama1	APN	17	68,114,792 (GRCm39)	missense	probably benign	0.36
IGL01994:Lama1	APN	17	68,059,434 (GRCm39)	missense	probably benign	0.05
IGL02017:Lama1	APN	17	68,071,720 (GRCm39)	missense	probably benign	0.00
IGL02021:Lama1	APN	17	68,128,621 (GRCm39)	missense	probably damaging	1.00
IGL02026:Lama1	APN	17	68,116,287 (GRCm39)	missense	possibly damaging	0.82
IGL02044:Lama1	APN	17	68,118,485 (GRCm39)	missense	probably benign	0.01
IGL02120:Lama1	APN	17	68,023,784 (GRCm39)	missense	probably damaging	1.00
IGL02425:Lama1	APN	17	68,118,480 (GRCm39)	missense	probably benign	0.45
IGL02549:Lama1	APN	17	68,097,830 (GRCm39)	missense	possibly damaging	0.93
IGL02642:Lama1	APN	17	68,119,361 (GRCm39)	missense	probably benign	0.00
IGL02795:Lama1	APN	17	68,045,889 (GRCm39)	splice site	probably null
IGL02798:Lama1	APN	17	68,102,186 (GRCm39)	splice site	probably benign
IGL02863:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL02870:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL02876:Lama1	APN	17	68,057,687 (GRCm39)	critical splice donor site	probably null
IGL02885:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL02891:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL02978:Lama1	APN	17	68,093,076 (GRCm39)	nonsense	probably null
IGL03064:Lama1	APN	17	68,086,099 (GRCm39)	missense	probably benign	0.01
IGL03076:Lama1	APN	17	68,023,794 (GRCm39)	missense	possibly damaging	0.95
IGL03110:Lama1	APN	17	68,105,981 (GRCm39)	missense	probably benign	0.04
IGL03143:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL03159:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
IGL03268:Lama1	APN	17	68,111,531 (GRCm39)	missense	probably damaging	0.99
ANU05:Lama1	UTSW	17	68,045,865 (GRCm39)	missense	probably damaging	1.00
PIT4472001:Lama1	UTSW	17	68,071,699 (GRCm39)	missense
R0047:Lama1	UTSW	17	68,102,181 (GRCm39)	splice site	probably benign
R0047:Lama1	UTSW	17	68,102,181 (GRCm39)	splice site	probably benign
R0050:Lama1	UTSW	17	68,089,051 (GRCm39)	missense	possibly damaging	0.66
R0096:Lama1	UTSW	17	68,112,408 (GRCm39)	missense	probably benign	0.12
R0096:Lama1	UTSW	17	68,112,408 (GRCm39)	missense	probably benign	0.12
R0111:Lama1	UTSW	17	68,044,493 (GRCm39)	missense	probably damaging	0.98
R0116:Lama1	UTSW	17	68,083,918 (GRCm39)	missense	probably benign	0.10
R0121:Lama1	UTSW	17	68,105,508 (GRCm39)	splice site	probably benign
R0278:Lama1	UTSW	17	68,117,178 (GRCm39)	missense	probably null	0.98
R0281:Lama1	UTSW	17	68,124,564 (GRCm39)	missense	probably damaging	1.00
R0312:Lama1	UTSW	17	68,082,846 (GRCm39)	missense	possibly damaging	0.45
R0419:Lama1	UTSW	17	68,098,605 (GRCm39)	critical splice donor site	probably null
R0512:Lama1	UTSW	17	68,086,129 (GRCm39)	missense	possibly damaging	0.67
R0514:Lama1	UTSW	17	68,071,693 (GRCm39)	missense	probably benign	0.40
R0562:Lama1	UTSW	17	68,122,954 (GRCm39)	missense	probably damaging	1.00
R0632:Lama1	UTSW	17	68,059,363 (GRCm39)	splice site	probably benign
R0645:Lama1	UTSW	17	68,080,707 (GRCm39)	missense	probably benign	0.01
R0712:Lama1	UTSW	17	68,086,037 (GRCm39)	splice site	probably null
R0763:Lama1	UTSW	17	68,079,813 (GRCm39)	missense	probably damaging	0.97
R0941:Lama1	UTSW	17	68,082,860 (GRCm39)	missense	probably benign	0.10
R1025:Lama1	UTSW	17	68,059,893 (GRCm39)	missense	probably benign	0.00
R1084:Lama1	UTSW	17	68,111,464 (GRCm39)	missense	probably benign	0.12
R1103:Lama1	UTSW	17	68,097,942 (GRCm39)	missense	probably damaging	0.98
R1420:Lama1	UTSW	17	68,097,942 (GRCm39)	missense	probably damaging	0.98
R1430:Lama1	UTSW	17	68,089,150 (GRCm39)	missense	possibly damaging	0.95
R1569:Lama1	UTSW	17	68,087,613 (GRCm39)	splice site	probably null
R1575:Lama1	UTSW	17	68,117,404 (GRCm39)	missense	possibly damaging	0.96
R1613:Lama1	UTSW	17	68,114,918 (GRCm39)	missense	probably benign	0.42
R1620:Lama1	UTSW	17	68,074,028 (GRCm39)	missense	probably benign	0.01
R1629:Lama1	UTSW	17	68,112,423 (GRCm39)	missense	probably benign	0.00
R1645:Lama1	UTSW	17	68,044,677 (GRCm39)	missense	probably benign	0.14
R1652:Lama1	UTSW	17	68,114,841 (GRCm39)	missense	probably damaging	0.97
R1674:Lama1	UTSW	17	68,098,239 (GRCm39)	missense	probably benign
R1678:Lama1	UTSW	17	68,117,150 (GRCm39)	missense	possibly damaging	0.56
R1710:Lama1	UTSW	17	68,060,786 (GRCm39)	missense	probably benign	0.00
R1712:Lama1	UTSW	17	68,024,181 (GRCm39)	missense	possibly damaging	0.95
R1737:Lama1	UTSW	17	68,109,916 (GRCm39)	missense	probably benign	0.36
R1757:Lama1	UTSW	17	68,004,378 (GRCm39)	missense	unknown
R1757:Lama1	UTSW	17	68,070,831 (GRCm39)	missense	probably benign	0.40
R1813:Lama1	UTSW	17	68,098,218 (GRCm39)	missense	probably benign
R1896:Lama1	UTSW	17	68,098,218 (GRCm39)	missense	probably benign
R1945:Lama1	UTSW	17	68,052,848 (GRCm39)	missense	probably benign	0.14
R2086:Lama1	UTSW	17	68,124,618 (GRCm39)	missense	probably damaging	1.00
R2149:Lama1	UTSW	17	68,080,860 (GRCm39)	missense	possibly damaging	0.95
R2178:Lama1	UTSW	17	68,076,510 (GRCm39)	missense	probably benign	0.07
R2183:Lama1	UTSW	17	68,098,004 (GRCm39)	missense	probably damaging	0.98
R2197:Lama1	UTSW	17	68,059,936 (GRCm39)	missense	probably benign	0.02
R2213:Lama1	UTSW	17	68,084,029 (GRCm39)	nonsense	probably null
R2260:Lama1	UTSW	17	68,044,502 (GRCm39)	missense	probably damaging	0.96
R2356:Lama1	UTSW	17	68,117,109 (GRCm39)	missense	probably damaging	1.00
R2420:Lama1	UTSW	17	68,057,548 (GRCm39)	missense	probably benign	0.00
R2421:Lama1	UTSW	17	68,057,548 (GRCm39)	missense	probably benign	0.00
R2422:Lama1	UTSW	17	68,057,548 (GRCm39)	missense	probably benign	0.00
R2424:Lama1	UTSW	17	68,105,660 (GRCm39)	missense	probably benign	0.09
R2442:Lama1	UTSW	17	68,075,312 (GRCm39)	missense	probably benign	0.04
R3147:Lama1	UTSW	17	68,044,653 (GRCm39)	missense	probably damaging	0.98
R3414:Lama1	UTSW	17	68,044,598 (GRCm39)	missense	probably damaging	1.00
R3683:Lama1	UTSW	17	68,075,328 (GRCm39)	missense	probably benign	0.40
R3820:Lama1	UTSW	17	68,086,041 (GRCm39)	splice site	probably null
R3821:Lama1	UTSW	17	68,086,041 (GRCm39)	splice site	probably null
R3822:Lama1	UTSW	17	68,086,041 (GRCm39)	splice site	probably null
R4012:Lama1	UTSW	17	68,119,368 (GRCm39)	nonsense	probably null
R4113:Lama1	UTSW	17	68,071,698 (GRCm39)	missense	probably benign	0.01
R4133:Lama1	UTSW	17	68,119,481 (GRCm39)	missense	probably damaging	1.00
R4133:Lama1	UTSW	17	68,057,650 (GRCm39)	missense	probably damaging	0.98
R4259:Lama1	UTSW	17	68,059,413 (GRCm39)	missense	possibly damaging	0.95
R4278:Lama1	UTSW	17	68,098,512 (GRCm39)	missense	probably null	0.00
R4321:Lama1	UTSW	17	68,078,078 (GRCm39)	missense	probably benign	0.03
R4374:Lama1	UTSW	17	68,111,513 (GRCm39)	missense	probably benign	0.00
R4386:Lama1	UTSW	17	68,080,707 (GRCm39)	missense	probably benign	0.01
R4463:Lama1	UTSW	17	68,068,695 (GRCm39)	missense	probably damaging	1.00
R4629:Lama1	UTSW	17	68,112,355 (GRCm39)	critical splice acceptor site	probably null
R4630:Lama1	UTSW	17	68,101,295 (GRCm39)	missense	probably benign	0.00
R4633:Lama1	UTSW	17	68,105,579 (GRCm39)	missense	probably damaging	0.96
R4668:Lama1	UTSW	17	68,059,429 (GRCm39)	missense	probably benign	0.27
R4684:Lama1	UTSW	17	68,080,773 (GRCm39)	missense	possibly damaging	0.88
R4745:Lama1	UTSW	17	68,045,775 (GRCm39)	missense	probably damaging	1.00
R4786:Lama1	UTSW	17	68,080,854 (GRCm39)	missense	possibly damaging	0.77
R4797:Lama1	UTSW	17	68,023,770 (GRCm39)	missense	probably benign	0.04
R4803:Lama1	UTSW	17	68,116,266 (GRCm39)	missense	probably damaging	1.00
R4925:Lama1	UTSW	17	68,101,309 (GRCm39)	missense	probably benign	0.02
R4939:Lama1	UTSW	17	68,044,470 (GRCm39)	missense	possibly damaging	0.91
R4952:Lama1	UTSW	17	68,074,561 (GRCm39)	critical splice donor site	probably null
R4975:Lama1	UTSW	17	68,045,829 (GRCm39)	missense	possibly damaging	0.95
R4977:Lama1	UTSW	17	68,044,677 (GRCm39)	missense	probably damaging	1.00
R5039:Lama1	UTSW	17	68,052,888 (GRCm39)	missense	possibly damaging	0.66
R5047:Lama1	UTSW	17	68,050,276 (GRCm39)	nonsense	probably null
R5195:Lama1	UTSW	17	68,071,795 (GRCm39)	missense	probably benign	0.13
R5230:Lama1	UTSW	17	68,052,078 (GRCm39)	nonsense	probably null
R5236:Lama1	UTSW	17	68,111,487 (GRCm39)	missense	probably benign	0.24
R5254:Lama1	UTSW	17	68,063,711 (GRCm39)	missense	probably benign	0.01
R5345:Lama1	UTSW	17	68,124,558 (GRCm39)	missense	probably benign
R5438:Lama1	UTSW	17	68,107,769 (GRCm39)	missense	possibly damaging	0.92
R5521:Lama1	UTSW	17	68,087,889 (GRCm39)	nonsense	probably null
R5568:Lama1	UTSW	17	68,075,293 (GRCm39)	critical splice acceptor site	probably null
R5645:Lama1	UTSW	17	68,109,943 (GRCm39)	missense	probably damaging	1.00
R5665:Lama1	UTSW	17	68,077,982 (GRCm39)	missense	probably damaging	1.00
R5727:Lama1	UTSW	17	68,122,219 (GRCm39)	missense	possibly damaging	0.81
R5757:Lama1	UTSW	17	68,045,782 (GRCm39)	missense	possibly damaging	0.59
R5795:Lama1	UTSW	17	68,103,722 (GRCm39)	missense	probably benign	0.02
R5857:Lama1	UTSW	17	68,114,838 (GRCm39)	missense	probably damaging	0.99
R5894:Lama1	UTSW	17	68,086,042 (GRCm39)	critical splice acceptor site	probably null
R5974:Lama1	UTSW	17	68,080,722 (GRCm39)	missense	probably benign	0.31
R6032:Lama1	UTSW	17	68,057,638 (GRCm39)	missense	probably benign	0.01
R6032:Lama1	UTSW	17	68,057,638 (GRCm39)	missense	probably benign	0.01
R6120:Lama1	UTSW	17	68,087,612 (GRCm39)	critical splice donor site	probably null
R6219:Lama1	UTSW	17	68,097,851 (GRCm39)	missense	probably benign	0.08
R6224:Lama1	UTSW	17	68,109,982 (GRCm39)	missense	possibly damaging	0.56
R6249:Lama1	UTSW	17	68,105,599 (GRCm39)	missense	probably benign
R6265:Lama1	UTSW	17	68,057,650 (GRCm39)	missense	probably damaging	0.98
R6276:Lama1	UTSW	17	68,091,083 (GRCm39)	splice site	probably null
R6284:Lama1	UTSW	17	68,117,091 (GRCm39)	missense	probably damaging	0.99
R6337:Lama1	UTSW	17	68,093,014 (GRCm39)	missense	probably benign	0.27
R6414:Lama1	UTSW	17	68,053,905 (GRCm39)	critical splice donor site	probably null
R6631:Lama1	UTSW	17	68,081,477 (GRCm39)	missense	probably benign	0.21
R6659:Lama1	UTSW	17	68,125,630 (GRCm39)	missense	probably damaging	1.00
R6660:Lama1	UTSW	17	68,111,495 (GRCm39)	missense	probably benign	0.05
R6677:Lama1	UTSW	17	68,102,228 (GRCm39)	missense	probably benign	0.14
R6763:Lama1	UTSW	17	68,053,868 (GRCm39)	missense	unknown
R6787:Lama1	UTSW	17	68,091,020 (GRCm39)	missense	unknown
R6831:Lama1	UTSW	17	68,063,749 (GRCm39)	missense	possibly damaging	0.89
R6855:Lama1	UTSW	17	68,089,150 (GRCm39)	missense	possibly damaging	0.95
R6910:Lama1	UTSW	17	68,098,459 (GRCm39)	missense	possibly damaging	0.60
R6934:Lama1	UTSW	17	68,081,538 (GRCm39)	missense	probably benign	0.04
R6945:Lama1	UTSW	17	68,120,861 (GRCm39)	missense
R6984:Lama1	UTSW	17	68,086,107 (GRCm39)	missense
R6989:Lama1	UTSW	17	68,060,753 (GRCm39)	missense
R6994:Lama1	UTSW	17	68,060,820 (GRCm39)	missense
R6995:Lama1	UTSW	17	68,060,820 (GRCm39)	missense
R7035:Lama1	UTSW	17	68,088,044 (GRCm39)	missense
R7133:Lama1	UTSW	17	68,089,141 (GRCm39)	missense
R7172:Lama1	UTSW	17	68,111,540 (GRCm39)	missense
R7197:Lama1	UTSW	17	68,044,700 (GRCm39)	nonsense	probably null
R7217:Lama1	UTSW	17	68,071,668 (GRCm39)	missense
R7229:Lama1	UTSW	17	68,059,441 (GRCm39)	missense
R7264:Lama1	UTSW	17	68,050,292 (GRCm39)	missense
R7311:Lama1	UTSW	17	68,074,380 (GRCm39)	missense
R7394:Lama1	UTSW	17	68,024,256 (GRCm39)	missense
R7460:Lama1	UTSW	17	68,074,013 (GRCm39)	missense
R7492:Lama1	UTSW	17	68,124,646 (GRCm39)	missense
R7494:Lama1	UTSW	17	68,118,441 (GRCm39)	missense
R7552:Lama1	UTSW	17	68,044,662 (GRCm39)	missense
R7576:Lama1	UTSW	17	68,089,036 (GRCm39)	missense
R7583:Lama1	UTSW	17	68,068,616 (GRCm39)	missense
R7649:Lama1	UTSW	17	68,044,549 (GRCm39)	missense
R7663:Lama1	UTSW	17	68,087,875 (GRCm39)	missense
R7667:Lama1	UTSW	17	68,087,592 (GRCm39)	missense
R7688:Lama1	UTSW	17	68,068,623 (GRCm39)	missense
R7693:Lama1	UTSW	17	68,124,026 (GRCm39)	missense
R7748:Lama1	UTSW	17	68,057,585 (GRCm39)	missense
R7778:Lama1	UTSW	17	68,111,468 (GRCm39)	missense
R7824:Lama1	UTSW	17	68,111,468 (GRCm39)	missense
R7861:Lama1	UTSW	17	68,116,216 (GRCm39)	missense
R7884:Lama1	UTSW	17	68,076,430 (GRCm39)	missense
R8029:Lama1	UTSW	17	68,124,589 (GRCm39)	missense
R8078:Lama1	UTSW	17	68,098,289 (GRCm39)	missense
R8101:Lama1	UTSW	17	68,052,917 (GRCm39)	missense
R8313:Lama1	UTSW	17	68,057,515 (GRCm39)	missense
R8356:Lama1	UTSW	17	68,044,491 (GRCm39)	missense
R8366:Lama1	UTSW	17	68,125,699 (GRCm39)	missense
R8403:Lama1	UTSW	17	68,052,918 (GRCm39)	missense
R8456:Lama1	UTSW	17	68,044,491 (GRCm39)	missense
R8466:Lama1	UTSW	17	68,120,948 (GRCm39)	missense
R8678:Lama1	UTSW	17	68,124,098 (GRCm39)	missense
R8728:Lama1	UTSW	17	68,125,663 (GRCm39)	missense
R8796:Lama1	UTSW	17	68,117,146 (GRCm39)	missense
R8885:Lama1	UTSW	17	68,080,779 (GRCm39)	missense
R8893:Lama1	UTSW	17	68,112,367 (GRCm39)	missense
R8898:Lama1	UTSW	17	68,128,610 (GRCm39)	missense
R8909:Lama1	UTSW	17	68,079,736 (GRCm39)	missense
R9025:Lama1	UTSW	17	68,119,491 (GRCm39)	missense
R9045:Lama1	UTSW	17	68,060,838 (GRCm39)	missense
R9098:Lama1	UTSW	17	68,111,508 (GRCm39)	missense
R9114:Lama1	UTSW	17	68,128,669 (GRCm39)	missense
R9173:Lama1	UTSW	17	68,076,597 (GRCm39)	missense
R9190:Lama1	UTSW	17	68,111,514 (GRCm39)	missense
R9381:Lama1	UTSW	17	68,044,479 (GRCm39)	missense
R9429:Lama1	UTSW	17	68,118,449 (GRCm39)	missense
R9504:Lama1	UTSW	17	68,128,661 (GRCm39)	missense
R9558:Lama1	UTSW	17	68,124,004 (GRCm39)	missense
R9647:Lama1	UTSW	17	68,024,170 (GRCm39)	missense
R9651:Lama1	UTSW	17	68,101,215 (GRCm39)	missense
R9654:Lama1	UTSW	17	68,101,266 (GRCm39)	missense
R9710:Lama1	UTSW	17	68,129,404 (GRCm39)	missense
R9733:Lama1	UTSW	17	68,116,940 (GRCm39)	missense
RF001:Lama1	UTSW	17	68,059,897 (GRCm39)	missense
RF013:Lama1	UTSW	17	68,088,057 (GRCm39)	missense
V8831:Lama1	UTSW	17	68,059,878 (GRCm39)	missense	probably benign	0.00
X0024:Lama1	UTSW	17	68,045,883 (GRCm39)	missense	probably damaging	1.00
X0028:Lama1	UTSW	17	68,101,305 (GRCm39)	missense	probably benign	0.06
X0028:Lama1	UTSW	17	68,074,417 (GRCm39)	missense	probably benign	0.00
X0066:Lama1	UTSW	17	68,118,561 (GRCm39)	missense	probably damaging	1.00
Z1088:Lama1	UTSW	17	68,117,166 (GRCm39)	missense	probably damaging	1.00
Z1088:Lama1	UTSW	17	68,078,077 (GRCm39)	missense	probably benign	0.25
Z1088:Lama1	UTSW	17	68,059,878 (GRCm39)	missense	probably benign	0.00
Z1176:Lama1	UTSW	17	68,059,878 (GRCm39)	missense	probably benign	0.00
Z1177:Lama1	UTSW	17	68,059,878 (GRCm39)	missense	probably benign	0.00
Z1191:Lama1	UTSW	17	68,105,639 (GRCm39)	missense

Predicted Primers

PCR Primer
(F):5'- CCACCCATAGGAATTCATACTTTTG -3'
(R):5'- GGTGAAGAAGTGCTACCACATAATAC -3'

Sequencing Primer
(F):5'- TTTGGAAGCAACTGAAGACTTTGGC -3'
(R):5'- CAACACCTGGACAAATGTGTTC -3'

Posted On

2019-10-07