Mutagenetix > Incidental Mutation

Incidental Mutation 'R7452:Or2y13'

577818

Institutional Source

Beutler Lab

Gene Symbol

Or2y13

Ensembl Gene

ENSMUSG00000107417

Gene Name

olfactory receptor family 2 subfamily Y member 14

Synonyms

Olfr1383, GA_x6K02T2QP88-5912627-5911692, MOR256-56

MMRRC Submission

045526-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.265) question?

Stock #

R7452 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

49414552-49415487 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 49415208 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Glutamine at position 219 (H219Q)

Ref Sequence

ENSEMBL: ENSMUSP00000145258 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077143] [ENSMUST00000204706] [ENSMUST00000213152] [ENSMUST00000213707] [ENSMUST00000213899] [ENSMUST00000217564]

AlphaFold

Q7TQT2

Predicted Effect

probably benign
Transcript: ENSMUST00000077143
AA Change: H219Q

PolyPhen 2 Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000076390
Gene: ENSMUSG00000107417
AA Change: H219Q

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	1.4e-44	PFAM
Pfam:7tm_1	41	289	3e-22	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000204706
AA Change: H219Q

PolyPhen 2 Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000145258
Gene: ENSMUSG00000107417
AA Change: H219Q

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	1.4e-44	PFAM
Pfam:7tm_1	41	289	3e-22	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000213152

Predicted Effect

probably benign
Transcript: ENSMUST00000213707

Predicted Effect

probably benign
Transcript: ENSMUST00000213899

Predicted Effect

probably benign
Transcript: ENSMUST00000217564

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 98.8%

Validation Efficiency

100% (75/75)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2m	C	A	6: 121,618,291 (GRCm39)	Q195K	probably damaging	Het
Abcg4	C	T	9: 44,190,897 (GRCm39)	G249R	probably damaging	Het
Actn1	T	C	12: 80,230,376 (GRCm39)	T293A	probably benign	Het
Adamts5	T	A	16: 85,674,869 (GRCm39)	T432S	probably benign	Het
Adh5	A	G	3: 138,160,506 (GRCm39)	T347A	probably benign	Het
Agbl5	A	G	5: 31,050,735 (GRCm39)	D432G	probably damaging	Het
Ank3	A	G	10: 69,734,881 (GRCm39)	T797A	possibly damaging	Het
Aoc1	T	G	6: 48,885,724 (GRCm39)	V743G	probably benign	Het
Arap2	A	T	5: 62,833,892 (GRCm39)	S858R	probably benign	Het
Arid1a	A	C	4: 133,480,438 (GRCm39)	V162G	possibly damaging	Het
Armc9	A	G	1: 86,140,814 (GRCm39)	D588G	possibly damaging	Het
Art3	A	G	5: 92,540,539 (GRCm39)	Y94C	probably damaging	Het
Btaf1	T	A	19: 36,946,527 (GRCm39)	D444E	probably damaging	Het
Cav2	A	G	6: 17,282,075 (GRCm39)	H111R	probably damaging	Het
Ccdc148	A	G	2: 58,717,596 (GRCm39)	L469P	probably damaging	Het
Celsr2	T	A	3: 108,320,406 (GRCm39)	E802V	possibly damaging	Het
Cfap57	T	C	4: 118,452,981 (GRCm39)	D574G	probably damaging	Het
Chd7	A	C	4: 8,854,731 (GRCm39)	D2024A	probably benign	Het
Corin	T	A	5: 72,592,590 (GRCm39)	D269V	possibly damaging	Het
Cyp4a12a	A	T	4: 115,184,795 (GRCm39)	I359F	probably damaging	Het
Defb6	T	C	8: 19,275,540 (GRCm39)	L7P	probably damaging	Het
Dnah7c	A	T	1: 46,686,196 (GRCm39)	M1817L	possibly damaging	Het
Dock3	A	G	9: 106,866,664 (GRCm39)	F682S	probably damaging	Het
Enpep	T	A	3: 129,065,052 (GRCm39)	Y879F	possibly damaging	Het
Enpp2	T	C	15: 54,730,132 (GRCm39)	N462S	probably damaging	Het
Ephb3	T	C	16: 21,036,107 (GRCm39)		probably null	Het
F7	C	T	8: 13,085,215 (GRCm39)	H414Y	probably benign	Het
Fbn1	T	C	2: 125,347,375 (GRCm39)	H50R	possibly damaging	Het
Fig4	T	C	10: 41,116,633 (GRCm39)	D586G	possibly damaging	Het
Fryl	A	G	5: 73,181,331 (GRCm39)	L2825P	probably damaging	Het
Gal3st2	T	A	1: 93,800,240 (GRCm39)	H30Q	possibly damaging	Het
Garre1	A	G	7: 33,945,096 (GRCm39)	S595P	probably benign	Het
Gm12886	G	A	4: 121,274,671 (GRCm39)	Q70*	probably null	Het
Gm8104	A	C	14: 42,967,501 (GRCm39)	T190P	probably benign	Het
Hps3	A	T	3: 20,065,592 (GRCm39)	N749K	probably damaging	Het
Hr	A	G	14: 70,808,926 (GRCm39)	T1101A	probably damaging	Het
Htatip2	T	A	7: 49,423,074 (GRCm39)	S210T	probably benign	Het
Ift80	T	C	3: 68,901,615 (GRCm39)		probably null	Het
Iqgap1	A	G	7: 80,410,577 (GRCm39)	V212A	possibly damaging	Het
Itih5	A	G	2: 10,243,607 (GRCm39)	E448G	probably damaging	Het
Kdm5b	T	C	1: 134,552,686 (GRCm39)	C1221R	probably damaging	Het
Lrrc72	T	C	12: 36,262,692 (GRCm39)	Y52C	probably benign	Het
Map1b	C	T	13: 99,644,648 (GRCm39)	R85Q	probably damaging	Het
Mdn1	T	C	4: 32,739,030 (GRCm39)	I3617T	possibly damaging	Het
Mtpap	T	A	18: 4,379,705 (GRCm39)	H98Q	possibly damaging	Het
Nemf	A	T	12: 69,384,733 (GRCm39)		probably null	Het
Neto1	A	T	18: 86,517,056 (GRCm39)	I458L	probably benign	Het
Nfam1	T	A	15: 82,899,163 (GRCm39)	M128L	probably benign	Het
Or4g16	A	G	2: 111,137,266 (GRCm39)	T239A	probably damaging	Het
Or5p75-ps1	C	T	7: 108,107,800 (GRCm39)	T179I	unknown	Het
Or8b50	A	T	9: 38,518,384 (GRCm39)	I208F	probably benign	Het
P2ry14	C	T	3: 59,023,466 (GRCm39)	G7D	probably benign	Het
Pde11a	A	G	2: 75,966,758 (GRCm39)	Y564H	probably damaging	Het
Pex5l	C	T	3: 33,058,467 (GRCm39)	V262I	probably benign	Het
Poli	A	G	18: 70,642,049 (GRCm39)	V717A	possibly damaging	Het
Prdm14	A	T	1: 13,195,783 (GRCm39)	W93R	probably damaging	Het
Rbm46	T	C	3: 82,771,428 (GRCm39)	M396V	probably benign	Het
Rcor2	T	C	19: 7,248,587 (GRCm39)	V212A	probably benign	Het
Rcor3	C	A	1: 191,822,173 (GRCm39)	G8V	probably damaging	Het
Rhox4d	G	A	X: 36,700,645 (GRCm39)	G191E	unknown	Het
Rictor	C	T	15: 6,801,635 (GRCm39)	S441L	probably benign	Het
Skp2	T	A	15: 9,113,920 (GRCm39)	Q366L	probably damaging	Het
Slc13a3	A	T	2: 165,269,034 (GRCm39)	S312T	probably benign	Het
Sstr1	T	C	12: 58,260,142 (GRCm39)	L255P	probably damaging	Het
Steap3	T	C	1: 120,155,585 (GRCm39)	E458G	possibly damaging	Het
Sv2b	T	A	7: 74,797,461 (GRCm39)	D311V	probably damaging	Het
Tmem132b	A	G	5: 125,715,332 (GRCm39)	D347G	probably benign	Het
Tmem161a	A	G	8: 70,630,138 (GRCm39)	D108G	probably damaging	Het
Traf5	T	A	1: 191,731,792 (GRCm39)	I47F		Het
Trp53bp2	C	T	1: 182,274,133 (GRCm39)	Q95*	probably null	Het
Ttn	G	T	2: 76,707,487 (GRCm39)		probably null	Het
Usf3	T	C	16: 44,040,397 (GRCm39)	S1626P	probably benign	Het
Usp3	T	C	9: 66,474,180 (GRCm39)	R33G	probably benign	Het
Zbtb20	G	T	16: 43,431,039 (GRCm39)	A517S	probably damaging	Het

Other mutations in Or2y13

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02193:Or2y13	APN	11	49,414,571 (GRCm39)	missense	possibly damaging	0.56
IGL03178:Or2y13	APN	11	49,414,817 (GRCm39)	missense	possibly damaging	0.90
R0089:Or2y13	UTSW	11	49,415,033 (GRCm39)	missense	possibly damaging	0.67
R0112:Or2y13	UTSW	11	49,414,961 (GRCm39)	missense	possibly damaging	0.70
R0243:Or2y13	UTSW	11	49,414,739 (GRCm39)	missense	probably damaging	1.00
R0445:Or2y13	UTSW	11	49,414,784 (GRCm39)	missense	probably damaging	1.00
R0646:Or2y13	UTSW	11	49,415,405 (GRCm39)	missense	probably damaging	1.00
R1695:Or2y13	UTSW	11	49,415,162 (GRCm39)	missense	probably benign	0.32
R2142:Or2y13	UTSW	11	49,414,666 (GRCm39)	missense	probably benign	0.00
R3898:Or2y13	UTSW	11	49,415,386 (GRCm39)	missense	probably damaging	0.98
R4085:Or2y13	UTSW	11	49,414,955 (GRCm39)	missense	probably benign	0.23
R5677:Or2y13	UTSW	11	49,414,771 (GRCm39)	missense	probably damaging	0.98
R6187:Or2y13	UTSW	11	49,414,338 (GRCm39)	unclassified	probably benign
R6272:Or2y13	UTSW	11	49,414,953 (GRCm39)	missense	possibly damaging	0.67
R6287:Or2y13	UTSW	11	49,415,072 (GRCm39)	missense	probably damaging	0.99
R6898:Or2y13	UTSW	11	49,414,536 (GRCm39)	unclassified	probably benign
R7007:Or2y13	UTSW	11	49,415,011 (GRCm39)	missense	probably benign	0.15
R7699:Or2y13	UTSW	11	49,415,381 (GRCm39)	missense	probably damaging	1.00
R7700:Or2y13	UTSW	11	49,415,381 (GRCm39)	missense	probably damaging	1.00
X0017:Or2y13	UTSW	11	49,414,829 (GRCm39)	missense	probably benign	0.05

Predicted Primers

PCR Primer
(F):5'- TGAACTCTCTGACTCAGACAAGC -3'
(R):5'- TCAGAGGGTTCAGCATTGGAG -3'

Sequencing Primer
(F):5'- TCTGACTCAGACAAGCCTCATCATG -3'
(R):5'- TGATAGTATAAAAGAGGGCAGCAAAC -3'

Posted On

2019-10-07