Incidental Mutation 'R0630:Cux1'
ID |
57826 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cux1
|
Ensembl Gene |
ENSMUSG00000029705 |
Gene Name |
cut-like homeobox 1 |
Synonyms |
CDP, Cutl1, Cux, Cux-1 |
MMRRC Submission |
038819-MU
|
Accession Numbers |
|
Essential gene? |
Probably essential
(E-score: 0.847)
|
Stock # |
R0630 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
136276989-136596344 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 136315689 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 1117
(V1117A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000135086
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000004097]
[ENSMUST00000175918]
[ENSMUST00000175975]
[ENSMUST00000175998]
[ENSMUST00000176172]
[ENSMUST00000176778]
[ENSMUST00000176745]
[ENSMUST00000176216]
[ENSMUST00000177297]
|
AlphaFold |
no structure available at present |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000004097
AA Change: V1026A
PolyPhen 2
Score 0.608 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000004097 Gene: ENSMUSG00000029705 AA Change: V1026A
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
low complexity region
|
425 |
436 |
N/A |
INTRINSIC |
CUT
|
452 |
538 |
5.06e-39 |
SMART |
low complexity region
|
602 |
608 |
N/A |
INTRINSIC |
low complexity region
|
620 |
642 |
N/A |
INTRINSIC |
CUT
|
841 |
929 |
3.31e-43 |
SMART |
low complexity region
|
956 |
972 |
N/A |
INTRINSIC |
low complexity region
|
990 |
1011 |
N/A |
INTRINSIC |
CUT
|
1024 |
1110 |
3.78e-38 |
SMART |
HOX
|
1150 |
1212 |
6.32e-15 |
SMART |
low complexity region
|
1224 |
1239 |
N/A |
INTRINSIC |
low complexity region
|
1317 |
1379 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000148082
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000163906
|
SMART Domains |
Protein: ENSMUSP00000131685 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
low complexity region
|
24 |
45 |
N/A |
INTRINSIC |
CUT
|
58 |
144 |
2.9e-42 |
SMART |
HOX
|
184 |
246 |
3.3e-17 |
SMART |
low complexity region
|
258 |
273 |
N/A |
INTRINSIC |
low complexity region
|
351 |
413 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175918
|
SMART Domains |
Protein: ENSMUSP00000135606 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
73 |
328 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175975
AA Change: V1104A
PolyPhen 2
Score 0.326 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000135223 Gene: ENSMUSG00000029705 AA Change: V1104A
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
169 |
N/A |
INTRINSIC |
low complexity region
|
235 |
251 |
N/A |
INTRINSIC |
low complexity region
|
277 |
289 |
N/A |
INTRINSIC |
low complexity region
|
331 |
342 |
N/A |
INTRINSIC |
CUT
|
358 |
444 |
5.06e-39 |
SMART |
low complexity region
|
508 |
514 |
N/A |
INTRINSIC |
low complexity region
|
526 |
548 |
N/A |
INTRINSIC |
CUT
|
747 |
835 |
3.31e-43 |
SMART |
low complexity region
|
862 |
878 |
N/A |
INTRINSIC |
low complexity region
|
896 |
917 |
N/A |
INTRINSIC |
CUT
|
930 |
1016 |
3.78e-38 |
SMART |
HOX
|
1056 |
1118 |
6.32e-15 |
SMART |
low complexity region
|
1130 |
1145 |
N/A |
INTRINSIC |
low complexity region
|
1223 |
1285 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175998
|
SMART Domains |
Protein: ENSMUSP00000135816 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
39 |
N/A |
INTRINSIC |
low complexity region
|
52 |
64 |
N/A |
INTRINSIC |
coiled coil region
|
76 |
148 |
N/A |
INTRINSIC |
Pfam:CASP_C
|
204 |
430 |
8.6e-72 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000176172
AA Change: V1117A
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000135086 Gene: ENSMUSG00000029705 AA Change: V1117A
Domain | Start | End | E-Value | Type |
coiled coil region
|
99 |
354 |
N/A |
INTRINSIC |
low complexity region
|
420 |
436 |
N/A |
INTRINSIC |
low complexity region
|
462 |
474 |
N/A |
INTRINSIC |
low complexity region
|
516 |
527 |
N/A |
INTRINSIC |
CUT
|
543 |
629 |
5.06e-39 |
SMART |
low complexity region
|
693 |
699 |
N/A |
INTRINSIC |
low complexity region
|
711 |
733 |
N/A |
INTRINSIC |
CUT
|
932 |
1020 |
3.31e-43 |
SMART |
low complexity region
|
1047 |
1063 |
N/A |
INTRINSIC |
low complexity region
|
1081 |
1102 |
N/A |
INTRINSIC |
CUT
|
1115 |
1201 |
3.78e-38 |
SMART |
HOX
|
1241 |
1303 |
6.32e-15 |
SMART |
low complexity region
|
1315 |
1330 |
N/A |
INTRINSIC |
low complexity region
|
1408 |
1470 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000176778
AA Change: V1109A
PolyPhen 2
Score 0.648 (Sensitivity: 0.87; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000135892 Gene: ENSMUSG00000029705 AA Change: V1109A
Domain | Start | End | E-Value | Type |
low complexity region
|
78 |
86 |
N/A |
INTRINSIC |
coiled coil region
|
195 |
448 |
N/A |
INTRINSIC |
low complexity region
|
508 |
519 |
N/A |
INTRINSIC |
CUT
|
535 |
621 |
5.06e-39 |
SMART |
low complexity region
|
685 |
691 |
N/A |
INTRINSIC |
low complexity region
|
703 |
725 |
N/A |
INTRINSIC |
CUT
|
924 |
1012 |
3.31e-43 |
SMART |
low complexity region
|
1039 |
1055 |
N/A |
INTRINSIC |
low complexity region
|
1073 |
1094 |
N/A |
INTRINSIC |
CUT
|
1107 |
1193 |
3.78e-38 |
SMART |
HOX
|
1233 |
1295 |
6.32e-15 |
SMART |
low complexity region
|
1307 |
1322 |
N/A |
INTRINSIC |
low complexity region
|
1400 |
1462 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000176486
AA Change: V988A
|
SMART Domains |
Protein: ENSMUSP00000135370 Gene: ENSMUSG00000029705 AA Change: V988A
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
363 |
N/A |
INTRINSIC |
low complexity region
|
429 |
445 |
N/A |
INTRINSIC |
low complexity region
|
471 |
483 |
N/A |
INTRINSIC |
low complexity region
|
525 |
536 |
N/A |
INTRINSIC |
CUT
|
552 |
638 |
5.06e-39 |
SMART |
Blast:CUT
|
641 |
840 |
3e-50 |
BLAST |
CUT
|
919 |
1007 |
3.31e-43 |
SMART |
low complexity region
|
1034 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1068 |
1089 |
N/A |
INTRINSIC |
CUT
|
1102 |
1188 |
3.78e-38 |
SMART |
HOX
|
1228 |
1290 |
6.32e-15 |
SMART |
low complexity region
|
1302 |
1317 |
N/A |
INTRINSIC |
low complexity region
|
1395 |
1457 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176745
|
SMART Domains |
Protein: ENSMUSP00000135512 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
363 |
N/A |
INTRINSIC |
internal_repeat_1
|
367 |
388 |
8.95e-5 |
PROSPERO |
Pfam:CASP_C
|
419 |
645 |
1.2e-71 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176216
|
SMART Domains |
Protein: ENSMUSP00000135054 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
internal_repeat_1
|
369 |
390 |
9.35e-5 |
PROSPERO |
Pfam:CASP_C
|
421 |
647 |
1.2e-71 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000177297
|
SMART Domains |
Protein: ENSMUSP00000134819 Gene: ENSMUSG00000029705
Domain | Start | End | E-Value | Type |
coiled coil region
|
16 |
45 |
N/A |
INTRINSIC |
coiled coil region
|
110 |
365 |
N/A |
INTRINSIC |
internal_repeat_1
|
369 |
390 |
8.99e-6 |
PROSPERO |
Pfam:CASP_C
|
422 |
527 |
1.8e-17 |
PFAM |
|
Meta Mutation Damage Score |
0.3217 |
Coding Region Coverage |
- 1x: 99.4%
- 3x: 99.0%
- 10x: 97.9%
- 20x: 96.2%
|
Validation Efficiency |
97% (108/111) |
MGI Phenotype |
PHENOTYPE: Homozygotes for a targeted null mutation exhibit delayed lung development and neonatal mortality. Survivors show growth retardation and hair defects. Homozygotes for a partially deleted protein have curly hair, and females tend to lose their litters. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 105 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700056E22Rik |
C |
T |
1: 183,766,104 (GRCm39) |
|
probably benign |
Het |
4930562C15Rik |
T |
A |
16: 4,668,803 (GRCm39) |
N731K |
possibly damaging |
Het |
Adgra1 |
A |
T |
7: 139,432,500 (GRCm39) |
K113* |
probably null |
Het |
Adgrl2 |
T |
C |
3: 148,544,880 (GRCm39) |
I659M |
probably damaging |
Het |
Adm |
G |
T |
7: 110,227,755 (GRCm39) |
R41L |
probably damaging |
Het |
Aimp2 |
T |
C |
5: 143,843,419 (GRCm39) |
E97G |
probably benign |
Het |
Aox1 |
T |
C |
1: 58,376,480 (GRCm39) |
|
probably benign |
Het |
Arhgap20 |
G |
A |
9: 51,760,684 (GRCm39) |
R809H |
probably damaging |
Het |
Arsa |
T |
C |
15: 89,358,207 (GRCm39) |
|
probably benign |
Het |
Atg2a |
G |
T |
19: 6,294,547 (GRCm39) |
A88S |
probably damaging |
Het |
Atm |
G |
A |
9: 53,442,922 (GRCm39) |
|
probably benign |
Het |
Atp1a2 |
A |
T |
1: 172,118,842 (GRCm39) |
I100N |
possibly damaging |
Het |
Camta2 |
G |
C |
11: 70,569,131 (GRCm39) |
L605V |
probably damaging |
Het |
Cand2 |
G |
A |
6: 115,780,766 (GRCm39) |
E1217K |
probably damaging |
Het |
Ccdc60 |
A |
G |
5: 116,274,440 (GRCm39) |
V388A |
possibly damaging |
Het |
Cdk14 |
C |
T |
5: 5,185,422 (GRCm39) |
|
probably benign |
Het |
Cdyl2 |
C |
T |
8: 117,350,774 (GRCm39) |
G119E |
probably benign |
Het |
Celsr3 |
A |
G |
9: 108,704,891 (GRCm39) |
N458S |
probably damaging |
Het |
Chd3 |
A |
C |
11: 69,238,021 (GRCm39) |
H1808Q |
probably damaging |
Het |
Cntnap2 |
T |
C |
6: 46,965,694 (GRCm39) |
V835A |
probably damaging |
Het |
Col4a1 |
C |
A |
8: 11,249,889 (GRCm39) |
|
probably benign |
Het |
Cpsf1 |
A |
G |
15: 76,486,171 (GRCm39) |
V357A |
probably damaging |
Het |
Cryzl1 |
A |
G |
16: 91,504,107 (GRCm39) |
|
probably benign |
Het |
Cts8 |
T |
C |
13: 61,401,256 (GRCm39) |
K90R |
possibly damaging |
Het |
Dbx1 |
T |
C |
7: 49,282,444 (GRCm39) |
T254A |
probably damaging |
Het |
Dgki |
C |
A |
6: 36,977,133 (GRCm39) |
C659F |
probably damaging |
Het |
Dnajc1 |
T |
G |
2: 18,236,612 (GRCm39) |
D332A |
probably damaging |
Het |
Dock8 |
C |
A |
19: 25,038,524 (GRCm39) |
T70K |
probably benign |
Het |
Dsc1 |
T |
A |
18: 20,218,919 (GRCm39) |
T828S |
probably damaging |
Het |
Dst |
T |
G |
1: 34,232,531 (GRCm39) |
V3510G |
probably benign |
Het |
Dst |
T |
C |
1: 34,238,554 (GRCm39) |
V1738A |
probably damaging |
Het |
Ehmt2 |
A |
G |
17: 35,118,818 (GRCm39) |
T167A |
probably benign |
Het |
Eri2 |
A |
T |
7: 119,385,640 (GRCm39) |
V287E |
probably benign |
Het |
Fat4 |
T |
A |
3: 39,054,321 (GRCm39) |
L4121H |
probably damaging |
Het |
Fbn1 |
T |
A |
2: 125,236,690 (GRCm39) |
D330V |
possibly damaging |
Het |
Fign |
A |
G |
2: 63,810,485 (GRCm39) |
Y262H |
possibly damaging |
Het |
Fnd3c2 |
C |
T |
X: 105,282,763 (GRCm39) |
M593I |
probably benign |
Het |
Fndc7 |
T |
A |
3: 108,783,931 (GRCm39) |
E226V |
probably damaging |
Het |
Gad2 |
A |
T |
2: 22,580,348 (GRCm39) |
Q583L |
probably benign |
Het |
Gcn1 |
G |
A |
5: 115,719,148 (GRCm39) |
A334T |
probably benign |
Het |
Ggt1 |
A |
G |
10: 75,421,336 (GRCm39) |
|
probably null |
Het |
Gli2 |
C |
T |
1: 118,769,648 (GRCm39) |
G635R |
possibly damaging |
Het |
Gm10253 |
T |
C |
3: 88,646,420 (GRCm39) |
E93G |
unknown |
Het |
Gm10428 |
A |
G |
11: 62,644,256 (GRCm39) |
|
probably benign |
Het |
Gm7104 |
T |
C |
12: 88,252,479 (GRCm39) |
|
noncoding transcript |
Het |
Gm8258 |
T |
G |
5: 104,924,385 (GRCm39) |
|
noncoding transcript |
Het |
Gpr107 |
A |
G |
2: 31,104,309 (GRCm39) |
N538S |
possibly damaging |
Het |
Hars1 |
T |
C |
18: 36,904,442 (GRCm39) |
E190G |
probably damaging |
Het |
Hoxc10 |
C |
T |
15: 102,875,917 (GRCm39) |
P209S |
probably benign |
Het |
Ighg3 |
T |
C |
12: 113,323,714 (GRCm39) |
|
probably benign |
Het |
Igsf10 |
C |
A |
3: 59,233,483 (GRCm39) |
W1750L |
probably damaging |
Het |
Igsf5 |
C |
A |
16: 96,174,023 (GRCm39) |
|
probably benign |
Het |
Itga10 |
T |
C |
3: 96,563,615 (GRCm39) |
|
probably benign |
Het |
Ldhd |
T |
C |
8: 112,353,934 (GRCm39) |
K422R |
probably benign |
Het |
Masp1 |
T |
C |
16: 23,271,169 (GRCm39) |
K693R |
probably benign |
Het |
Mb21d2 |
G |
A |
16: 28,748,324 (GRCm39) |
A31V |
probably benign |
Het |
Mbd1 |
T |
A |
18: 74,409,798 (GRCm39) |
|
probably benign |
Het |
Mdm4 |
G |
A |
1: 132,919,491 (GRCm39) |
T459I |
possibly damaging |
Het |
Megf10 |
A |
T |
18: 57,421,067 (GRCm39) |
I902F |
probably benign |
Het |
Mta3 |
A |
G |
17: 84,022,056 (GRCm39) |
N37S |
probably damaging |
Het |
Mterf3 |
T |
A |
13: 67,060,372 (GRCm39) |
Y372F |
probably damaging |
Het |
Nbeal2 |
A |
G |
9: 110,465,102 (GRCm39) |
|
probably benign |
Het |
Nbr1 |
T |
C |
11: 101,457,913 (GRCm39) |
|
probably benign |
Het |
Ndst3 |
A |
G |
3: 123,355,720 (GRCm39) |
M103T |
probably damaging |
Het |
Notch3 |
C |
A |
17: 32,366,446 (GRCm39) |
|
probably benign |
Het |
Npr2 |
A |
T |
4: 43,641,219 (GRCm39) |
E415V |
probably benign |
Het |
Or2n1c |
A |
G |
17: 38,519,304 (GRCm39) |
H56R |
probably damaging |
Het |
Or4k40 |
T |
C |
2: 111,251,191 (GRCm39) |
Y35C |
probably damaging |
Het |
Or52h9 |
G |
C |
7: 104,202,998 (GRCm39) |
V291L |
probably benign |
Het |
Or5be3 |
A |
T |
2: 86,863,653 (GRCm39) |
M304K |
probably benign |
Het |
Or8b50 |
T |
A |
9: 38,518,192 (GRCm39) |
F144I |
probably benign |
Het |
Pappa2 |
T |
A |
1: 158,660,343 (GRCm39) |
D1246V |
probably benign |
Het |
Pcdhgc5 |
A |
T |
18: 37,954,931 (GRCm39) |
D735V |
probably benign |
Het |
Pik3ca |
A |
G |
3: 32,504,176 (GRCm39) |
Y622C |
possibly damaging |
Het |
Plppr2 |
A |
G |
9: 21,859,197 (GRCm39) |
D438G |
probably benign |
Het |
Ppfibp2 |
A |
T |
7: 107,337,806 (GRCm39) |
|
probably null |
Het |
Prdm15 |
A |
T |
16: 97,638,907 (GRCm39) |
L77Q |
probably null |
Het |
Prdm8 |
T |
C |
5: 98,332,380 (GRCm39) |
S94P |
probably damaging |
Het |
Prkdc |
A |
T |
16: 15,628,665 (GRCm39) |
Q3470L |
probably damaging |
Het |
Prl3c1 |
T |
C |
13: 27,384,674 (GRCm39) |
|
probably benign |
Het |
Ptchd4 |
A |
T |
17: 42,688,076 (GRCm39) |
H206L |
probably benign |
Het |
Rack1 |
G |
A |
11: 48,694,804 (GRCm39) |
|
probably benign |
Het |
Rere |
T |
C |
4: 150,703,545 (GRCm39) |
L1509P |
probably damaging |
Het |
Rgma |
T |
A |
7: 73,067,366 (GRCm39) |
L301Q |
probably damaging |
Het |
Rgs6 |
T |
A |
12: 83,094,324 (GRCm39) |
|
probably benign |
Het |
Rictor |
C |
A |
15: 6,823,973 (GRCm39) |
R1613S |
probably damaging |
Het |
Ripk1 |
T |
G |
13: 34,211,764 (GRCm39) |
F358C |
probably damaging |
Het |
Robo2 |
T |
C |
16: 73,713,093 (GRCm39) |
D1217G |
probably benign |
Het |
Shc2 |
A |
T |
10: 79,461,975 (GRCm39) |
W357R |
probably null |
Het |
Slc25a45 |
T |
C |
19: 5,930,556 (GRCm39) |
L81P |
probably damaging |
Het |
Slc9c1 |
A |
T |
16: 45,363,483 (GRCm39) |
|
probably benign |
Het |
Spats2 |
T |
C |
15: 99,083,909 (GRCm39) |
|
probably null |
Het |
Stac3 |
A |
T |
10: 127,343,632 (GRCm39) |
E258V |
probably damaging |
Het |
Thada |
A |
G |
17: 84,536,603 (GRCm39) |
S1648P |
probably damaging |
Het |
Tmem168 |
T |
C |
6: 13,583,064 (GRCm39) |
T222A |
probably benign |
Het |
Tmtc4 |
T |
C |
14: 123,163,502 (GRCm39) |
|
probably benign |
Het |
Trappc14 |
A |
G |
5: 138,260,551 (GRCm39) |
S292P |
probably damaging |
Het |
Trim38 |
T |
G |
13: 23,975,115 (GRCm39) |
Y351* |
probably null |
Het |
Trip12 |
T |
C |
1: 84,771,636 (GRCm39) |
R213G |
possibly damaging |
Het |
Vav3 |
C |
T |
3: 109,331,328 (GRCm39) |
R76W |
probably damaging |
Het |
Vmn1r63 |
G |
T |
7: 5,806,263 (GRCm39) |
P123H |
probably damaging |
Het |
Wdr5 |
A |
G |
2: 27,410,619 (GRCm39) |
N130S |
probably benign |
Het |
Wnk4 |
C |
A |
11: 101,156,212 (GRCm39) |
R27S |
probably damaging |
Het |
Ykt6 |
G |
A |
11: 5,909,323 (GRCm39) |
S44N |
probably benign |
Het |
Ythdc1 |
T |
A |
5: 86,957,207 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Cux1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00846:Cux1
|
APN |
5 |
136,355,650 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00966:Cux1
|
APN |
5 |
136,340,345 (GRCm39) |
intron |
probably benign |
|
IGL01129:Cux1
|
APN |
5 |
136,333,572 (GRCm39) |
intron |
probably benign |
|
IGL01885:Cux1
|
APN |
5 |
136,337,301 (GRCm39) |
missense |
possibly damaging |
0.90 |
IGL01947:Cux1
|
APN |
5 |
136,303,979 (GRCm39) |
missense |
probably benign |
0.04 |
IGL02259:Cux1
|
APN |
5 |
136,355,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02666:Cux1
|
APN |
5 |
136,304,169 (GRCm39) |
nonsense |
probably null |
|
IGL02826:Cux1
|
APN |
5 |
136,336,857 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03014:Cux1
|
UTSW |
5 |
136,594,379 (GRCm39) |
intron |
probably benign |
|
R0047:Cux1
|
UTSW |
5 |
136,392,107 (GRCm39) |
splice site |
probably benign |
|
R0047:Cux1
|
UTSW |
5 |
136,392,107 (GRCm39) |
splice site |
probably benign |
|
R0057:Cux1
|
UTSW |
5 |
136,285,136 (GRCm39) |
missense |
probably damaging |
1.00 |
R0149:Cux1
|
UTSW |
5 |
136,308,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R0295:Cux1
|
UTSW |
5 |
136,342,066 (GRCm39) |
missense |
probably benign |
0.04 |
R0361:Cux1
|
UTSW |
5 |
136,308,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R0533:Cux1
|
UTSW |
5 |
136,336,713 (GRCm39) |
missense |
probably damaging |
1.00 |
R0801:Cux1
|
UTSW |
5 |
136,355,783 (GRCm39) |
missense |
probably damaging |
0.97 |
R0884:Cux1
|
UTSW |
5 |
136,336,689 (GRCm39) |
missense |
probably damaging |
1.00 |
R0976:Cux1
|
UTSW |
5 |
136,342,144 (GRCm39) |
missense |
probably damaging |
1.00 |
R1073:Cux1
|
UTSW |
5 |
136,281,395 (GRCm39) |
critical splice donor site |
probably null |
|
R1222:Cux1
|
UTSW |
5 |
136,304,003 (GRCm39) |
missense |
probably benign |
0.18 |
R1518:Cux1
|
UTSW |
5 |
136,337,133 (GRCm39) |
missense |
probably benign |
0.29 |
R1686:Cux1
|
UTSW |
5 |
136,304,235 (GRCm39) |
nonsense |
probably null |
|
R1687:Cux1
|
UTSW |
5 |
136,341,523 (GRCm39) |
missense |
probably damaging |
1.00 |
R1758:Cux1
|
UTSW |
5 |
136,421,176 (GRCm39) |
missense |
probably damaging |
1.00 |
R1797:Cux1
|
UTSW |
5 |
136,304,169 (GRCm39) |
missense |
probably benign |
0.22 |
R1919:Cux1
|
UTSW |
5 |
136,392,173 (GRCm39) |
nonsense |
probably null |
|
R2051:Cux1
|
UTSW |
5 |
136,361,512 (GRCm39) |
missense |
probably damaging |
1.00 |
R2339:Cux1
|
UTSW |
5 |
136,315,862 (GRCm39) |
missense |
probably damaging |
1.00 |
R3438:Cux1
|
UTSW |
5 |
136,340,414 (GRCm39) |
missense |
probably damaging |
0.97 |
R3713:Cux1
|
UTSW |
5 |
136,594,397 (GRCm39) |
intron |
probably benign |
|
R3800:Cux1
|
UTSW |
5 |
136,344,887 (GRCm39) |
missense |
probably damaging |
1.00 |
R3964:Cux1
|
UTSW |
5 |
136,311,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R4135:Cux1
|
UTSW |
5 |
136,336,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R4198:Cux1
|
UTSW |
5 |
136,315,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R4467:Cux1
|
UTSW |
5 |
136,341,576 (GRCm39) |
missense |
probably damaging |
1.00 |
R4498:Cux1
|
UTSW |
5 |
136,341,847 (GRCm39) |
missense |
probably damaging |
1.00 |
R4622:Cux1
|
UTSW |
5 |
136,337,154 (GRCm39) |
missense |
probably damaging |
0.99 |
R4623:Cux1
|
UTSW |
5 |
136,337,154 (GRCm39) |
missense |
probably damaging |
0.99 |
R4651:Cux1
|
UTSW |
5 |
136,596,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R4652:Cux1
|
UTSW |
5 |
136,596,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R4658:Cux1
|
UTSW |
5 |
136,279,448 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4665:Cux1
|
UTSW |
5 |
136,315,653 (GRCm39) |
missense |
probably damaging |
1.00 |
R4704:Cux1
|
UTSW |
5 |
136,278,055 (GRCm39) |
missense |
probably benign |
0.01 |
R4867:Cux1
|
UTSW |
5 |
136,303,815 (GRCm39) |
intron |
probably benign |
|
R4965:Cux1
|
UTSW |
5 |
136,340,410 (GRCm39) |
missense |
possibly damaging |
0.77 |
R5090:Cux1
|
UTSW |
5 |
136,342,054 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5155:Cux1
|
UTSW |
5 |
136,594,295 (GRCm39) |
intron |
probably benign |
|
R5226:Cux1
|
UTSW |
5 |
136,399,027 (GRCm39) |
missense |
probably benign |
0.01 |
R5252:Cux1
|
UTSW |
5 |
136,337,151 (GRCm39) |
missense |
probably damaging |
0.98 |
R5266:Cux1
|
UTSW |
5 |
136,341,548 (GRCm39) |
missense |
probably damaging |
1.00 |
R5399:Cux1
|
UTSW |
5 |
136,281,458 (GRCm39) |
missense |
possibly damaging |
0.58 |
R5509:Cux1
|
UTSW |
5 |
136,304,171 (GRCm39) |
missense |
probably benign |
0.13 |
R5609:Cux1
|
UTSW |
5 |
136,421,174 (GRCm39) |
missense |
probably damaging |
1.00 |
R5681:Cux1
|
UTSW |
5 |
136,337,038 (GRCm39) |
missense |
probably damaging |
1.00 |
R5993:Cux1
|
UTSW |
5 |
136,392,125 (GRCm39) |
missense |
probably benign |
0.00 |
R6049:Cux1
|
UTSW |
5 |
136,361,564 (GRCm39) |
missense |
probably damaging |
1.00 |
R6290:Cux1
|
UTSW |
5 |
136,340,412 (GRCm39) |
missense |
probably damaging |
0.99 |
R6310:Cux1
|
UTSW |
5 |
136,304,018 (GRCm39) |
missense |
probably benign |
0.10 |
R6351:Cux1
|
UTSW |
5 |
136,338,646 (GRCm39) |
missense |
probably damaging |
1.00 |
R6531:Cux1
|
UTSW |
5 |
136,303,973 (GRCm39) |
missense |
probably benign |
0.03 |
R6590:Cux1
|
UTSW |
5 |
136,368,971 (GRCm39) |
missense |
probably damaging |
0.99 |
R6663:Cux1
|
UTSW |
5 |
136,514,701 (GRCm39) |
missense |
probably damaging |
1.00 |
R6690:Cux1
|
UTSW |
5 |
136,368,971 (GRCm39) |
missense |
probably damaging |
0.99 |
R6777:Cux1
|
UTSW |
5 |
136,594,422 (GRCm39) |
intron |
probably benign |
|
R6786:Cux1
|
UTSW |
5 |
136,596,085 (GRCm39) |
missense |
probably damaging |
1.00 |
R6817:Cux1
|
UTSW |
5 |
136,402,027 (GRCm39) |
splice site |
probably null |
|
R6989:Cux1
|
UTSW |
5 |
136,308,502 (GRCm39) |
nonsense |
probably null |
|
R7011:Cux1
|
UTSW |
5 |
136,388,887 (GRCm39) |
missense |
probably damaging |
1.00 |
R7167:Cux1
|
UTSW |
5 |
136,338,895 (GRCm39) |
splice site |
probably null |
|
R7699:Cux1
|
UTSW |
5 |
136,514,593 (GRCm39) |
critical splice donor site |
probably null |
|
R7861:Cux1
|
UTSW |
5 |
136,281,458 (GRCm39) |
missense |
possibly damaging |
0.58 |
R7876:Cux1
|
UTSW |
5 |
136,392,161 (GRCm39) |
missense |
probably benign |
0.00 |
R7916:Cux1
|
UTSW |
5 |
136,311,815 (GRCm39) |
missense |
probably damaging |
1.00 |
R8023:Cux1
|
UTSW |
5 |
136,402,251 (GRCm39) |
missense |
probably damaging |
0.99 |
R8154:Cux1
|
UTSW |
5 |
136,281,434 (GRCm39) |
missense |
probably damaging |
1.00 |
R8267:Cux1
|
UTSW |
5 |
136,311,853 (GRCm39) |
missense |
probably damaging |
1.00 |
R8289:Cux1
|
UTSW |
5 |
136,337,358 (GRCm39) |
missense |
probably damaging |
0.99 |
R8305:Cux1
|
UTSW |
5 |
136,388,863 (GRCm39) |
missense |
probably benign |
0.02 |
R8319:Cux1
|
UTSW |
5 |
136,594,251 (GRCm39) |
missense |
probably benign |
0.02 |
R8405:Cux1
|
UTSW |
5 |
136,304,241 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8483:Cux1
|
UTSW |
5 |
136,303,944 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8506:Cux1
|
UTSW |
5 |
136,337,358 (GRCm39) |
missense |
probably damaging |
0.99 |
R8671:Cux1
|
UTSW |
5 |
136,279,454 (GRCm39) |
missense |
probably damaging |
1.00 |
R8680:Cux1
|
UTSW |
5 |
136,336,710 (GRCm39) |
missense |
possibly damaging |
0.46 |
R8737:Cux1
|
UTSW |
5 |
136,311,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R8738:Cux1
|
UTSW |
5 |
136,402,220 (GRCm39) |
missense |
probably damaging |
1.00 |
R8793:Cux1
|
UTSW |
5 |
136,594,539 (GRCm39) |
missense |
unknown |
|
R8897:Cux1
|
UTSW |
5 |
136,315,623 (GRCm39) |
missense |
probably damaging |
1.00 |
R8926:Cux1
|
UTSW |
5 |
136,338,404 (GRCm39) |
intron |
probably benign |
|
R8954:Cux1
|
UTSW |
5 |
136,402,203 (GRCm39) |
nonsense |
probably null |
|
R9092:Cux1
|
UTSW |
5 |
136,514,671 (GRCm39) |
missense |
probably damaging |
1.00 |
R9205:Cux1
|
UTSW |
5 |
136,398,989 (GRCm39) |
missense |
probably damaging |
1.00 |
R9550:Cux1
|
UTSW |
5 |
136,340,387 (GRCm39) |
missense |
probably damaging |
0.99 |
R9578:Cux1
|
UTSW |
5 |
136,282,919 (GRCm39) |
critical splice donor site |
probably null |
|
R9682:Cux1
|
UTSW |
5 |
136,337,116 (GRCm39) |
missense |
probably benign |
|
R9701:Cux1
|
UTSW |
5 |
136,343,169 (GRCm39) |
missense |
probably damaging |
0.97 |
R9712:Cux1
|
UTSW |
5 |
136,338,673 (GRCm39) |
missense |
probably benign |
0.35 |
|
Predicted Primers |
PCR Primer
(F):5'- AGCATTAAGCTGCTCTGCTCTGG -3'
(R):5'- CAGCGAATCTGTGAAGAGTCTCACC -3'
Sequencing Primer
(F):5'- acttgtagcaatgtaaaaaagttgg -3'
(R):5'- TGAAGAGTCTCACCGAGCTG -3'
|
Posted On |
2013-07-11 |