Incidental Mutation 'R0708:Or8d2b'
ID |
63858 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Or8d2b
|
Ensembl Gene |
ENSMUSG00000064333 |
Gene Name |
olfactory receptor family 8 subfamily D member 2D |
Synonyms |
MOR171-8, Olfr926, GA_x6K02T2PVTD-32573036-32573962 |
MMRRC Submission |
038891-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.085)
|
Stock # |
R0708 (G1)
|
Quality Score |
89 |
Status
|
Not validated
|
Chromosome |
9 |
Chromosomal Location |
38788474-38789400 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 38788571 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Glutamic Acid
at position 33
(V33E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000077405
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078289]
|
AlphaFold |
Q9EQ98 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000078289
AA Change: V33E
PolyPhen 2
Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000077405 Gene: ENSMUSG00000064333 AA Change: V33E
Domain | Start | End | E-Value | Type |
Pfam:7tm_4
|
28 |
305 |
2.9e-53 |
PFAM |
Pfam:7TM_GPCR_Srsx
|
32 |
282 |
8.6e-7 |
PFAM |
Pfam:7tm_1
|
38 |
287 |
1.6e-20 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.5%
- 20x: 95.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 30 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Brdt |
A |
T |
5: 107,506,766 (GRCm39) |
K450* |
probably null |
Het |
Cand2 |
G |
A |
6: 115,780,766 (GRCm39) |
E1217K |
probably damaging |
Het |
Col9a1 |
A |
T |
1: 24,276,342 (GRCm39) |
Q750L |
possibly damaging |
Het |
Dnah6 |
A |
T |
6: 73,189,605 (GRCm39) |
S14R |
probably benign |
Het |
Enox1 |
A |
G |
14: 77,830,352 (GRCm39) |
N319S |
probably benign |
Het |
Frs2 |
G |
A |
10: 116,909,997 (GRCm39) |
T455M |
probably damaging |
Het |
Glra3 |
C |
T |
8: 56,578,399 (GRCm39) |
|
probably benign |
Het |
Gmppa |
T |
C |
1: 75,419,218 (GRCm39) |
F375S |
probably damaging |
Het |
Hectd4 |
G |
A |
5: 121,424,526 (GRCm39) |
|
probably null |
Het |
Hgf |
C |
A |
5: 16,771,761 (GRCm39) |
C129* |
probably null |
Het |
Insc |
T |
A |
7: 114,444,381 (GRCm39) |
V456E |
probably damaging |
Het |
Ints14 |
G |
A |
9: 64,891,266 (GRCm39) |
V416I |
probably benign |
Het |
Klk1b11 |
T |
C |
7: 43,647,152 (GRCm39) |
F29L |
possibly damaging |
Het |
Ogfod1 |
C |
T |
8: 94,765,673 (GRCm39) |
L79F |
possibly damaging |
Het |
Orc3 |
A |
T |
4: 34,597,368 (GRCm39) |
I224N |
probably damaging |
Het |
Papss2 |
T |
C |
19: 32,614,616 (GRCm39) |
F111L |
probably damaging |
Het |
Poc1b |
A |
G |
10: 98,990,992 (GRCm39) |
D291G |
probably null |
Het |
Prl8a8 |
A |
T |
13: 27,695,528 (GRCm39) |
M72K |
possibly damaging |
Het |
Ptpn7 |
C |
A |
1: 135,062,285 (GRCm39) |
T77K |
probably damaging |
Het |
Ptpro |
T |
C |
6: 137,363,251 (GRCm39) |
S462P |
probably benign |
Het |
Rab3gap2 |
T |
A |
1: 184,982,123 (GRCm39) |
S392T |
probably damaging |
Het |
Sema4d |
A |
G |
13: 51,866,755 (GRCm39) |
V245A |
probably benign |
Het |
Sgcb |
A |
T |
5: 73,798,225 (GRCm39) |
|
probably null |
Het |
Slc24a1 |
T |
A |
9: 64,855,172 (GRCm39) |
K578N |
unknown |
Het |
Sptbn1 |
A |
T |
11: 30,064,739 (GRCm39) |
V1920E |
probably damaging |
Het |
Tecr |
A |
T |
8: 84,299,738 (GRCm39) |
I101N |
probably damaging |
Het |
Tectb |
T |
C |
19: 55,179,984 (GRCm39) |
F277L |
probably benign |
Het |
Tgs1 |
T |
A |
4: 3,586,152 (GRCm39) |
L343H |
probably benign |
Het |
Thbs4 |
C |
A |
13: 92,909,694 (GRCm39) |
G368W |
probably damaging |
Het |
Zfp558 |
T |
C |
9: 18,368,123 (GRCm39) |
S222G |
possibly damaging |
Het |
|
Other mutations in Or8d2b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01886:Or8d2b
|
APN |
9 |
38,788,844 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02315:Or8d2b
|
APN |
9 |
38,789,353 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02626:Or8d2b
|
APN |
9 |
38,788,784 (GRCm39) |
missense |
probably benign |
0.05 |
IGL03001:Or8d2b
|
APN |
9 |
38,789,374 (GRCm39) |
missense |
probably benign |
|
IGL03085:Or8d2b
|
APN |
9 |
38,788,959 (GRCm39) |
missense |
probably benign |
|
R0365:Or8d2b
|
UTSW |
9 |
38,788,481 (GRCm39) |
missense |
probably benign |
0.00 |
R0600:Or8d2b
|
UTSW |
9 |
38,789,111 (GRCm39) |
missense |
probably damaging |
0.99 |
R1178:Or8d2b
|
UTSW |
9 |
38,789,051 (GRCm39) |
missense |
probably damaging |
1.00 |
R1762:Or8d2b
|
UTSW |
9 |
38,789,081 (GRCm39) |
missense |
probably damaging |
0.98 |
R1856:Or8d2b
|
UTSW |
9 |
38,788,892 (GRCm39) |
missense |
possibly damaging |
0.58 |
R1924:Or8d2b
|
UTSW |
9 |
38,789,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R2267:Or8d2b
|
UTSW |
9 |
38,789,359 (GRCm39) |
missense |
probably benign |
0.00 |
R3729:Or8d2b
|
UTSW |
9 |
38,788,547 (GRCm39) |
missense |
probably damaging |
1.00 |
R4290:Or8d2b
|
UTSW |
9 |
38,788,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R4292:Or8d2b
|
UTSW |
9 |
38,788,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R4293:Or8d2b
|
UTSW |
9 |
38,788,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R4295:Or8d2b
|
UTSW |
9 |
38,788,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R4973:Or8d2b
|
UTSW |
9 |
38,789,400 (GRCm39) |
makesense |
probably null |
|
R5026:Or8d2b
|
UTSW |
9 |
38,789,195 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5086:Or8d2b
|
UTSW |
9 |
38,789,087 (GRCm39) |
missense |
probably damaging |
1.00 |
R5103:Or8d2b
|
UTSW |
9 |
38,788,872 (GRCm39) |
missense |
probably damaging |
1.00 |
R5817:Or8d2b
|
UTSW |
9 |
38,788,673 (GRCm39) |
missense |
probably damaging |
1.00 |
R5998:Or8d2b
|
UTSW |
9 |
38,789,165 (GRCm39) |
missense |
probably damaging |
0.99 |
R6101:Or8d2b
|
UTSW |
9 |
38,788,604 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6105:Or8d2b
|
UTSW |
9 |
38,788,604 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6176:Or8d2b
|
UTSW |
9 |
38,788,673 (GRCm39) |
missense |
probably damaging |
1.00 |
R6403:Or8d2b
|
UTSW |
9 |
38,788,538 (GRCm39) |
missense |
probably damaging |
0.97 |
R8116:Or8d2b
|
UTSW |
9 |
38,789,026 (GRCm39) |
missense |
probably damaging |
0.98 |
R8144:Or8d2b
|
UTSW |
9 |
38,788,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R8972:Or8d2b
|
UTSW |
9 |
38,789,150 (GRCm39) |
missense |
probably benign |
0.00 |
R9520:Or8d2b
|
UTSW |
9 |
38,789,039 (GRCm39) |
missense |
probably benign |
0.22 |
R9550:Or8d2b
|
UTSW |
9 |
38,788,937 (GRCm39) |
missense |
probably benign |
0.00 |
R9614:Or8d2b
|
UTSW |
9 |
38,789,281 (GRCm39) |
missense |
probably damaging |
0.98 |
RF014:Or8d2b
|
UTSW |
9 |
38,789,196 (GRCm39) |
missense |
probably benign |
0.14 |
X0022:Or8d2b
|
UTSW |
9 |
38,788,952 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
Predicted Primers |
PCR Primer
(F):5'- GACGTGGCTTAAAGAGAGGTAGTCAGTA -3'
(R):5'- CAGCAGGTAGCCTTCTGAAATAGCTAAA -3'
Sequencing Primer
(F):5'- gaggtagaaagaggagaagtatatgg -3'
(R):5'- GCTGAGTCATGCACTCCTTAAAG -3'
|
Posted On |
2013-07-30 |