Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00326:Galnt11'

6471

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Galnt11

Ensembl Gene

ENSMUSG00000038072

Gene Name

polypeptide N-acetylgalactosaminyltransferase 11

Synonyms

A430075I06Rik, E430002F06Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.170) question?

Stock #

IGL00326

Quality Score

Status

Chromosome

Chromosomal Location

25427732-25470916 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

T to C at 25453829 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000115282 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045737] [ENSMUST00000114950] [ENSMUST00000114952] [ENSMUST00000144971]

AlphaFold

Q921L8

Predicted Effect

probably benign
Transcript: ENSMUST00000045737

SMART Domains

Protein: ENSMUSP00000036240
Gene: ENSMUSG00000038072

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
Pfam:Glyco_tranf_2_3	151	386	5.3e-9	PFAM
Pfam:Glycos_transf_2	154	337	3.7e-33	PFAM
Pfam:Glyco_transf_7C	315	383	2.1e-9	PFAM
RICIN	476	607	7.09e-23	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000114950

SMART Domains

Protein: ENSMUSP00000110600
Gene: ENSMUSG00000038072

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
Pfam:Glyco_tranf_2_3	151	385	1.7e-10	PFAM
Pfam:Glycos_transf_2	154	337	4.8e-29	PFAM
Pfam:Glyco_transf_7C	314	383	3.5e-9	PFAM
RICIN	476	607	7.09e-23	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000114952

SMART Domains

Protein: ENSMUSP00000110602
Gene: ENSMUSG00000038072

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
Pfam:Glyco_tranf_2_3	151	385	1.7e-10	PFAM
Pfam:Glycos_transf_2	154	337	4.8e-29	PFAM
Pfam:Glyco_transf_7C	314	383	3.5e-9	PFAM
RICIN	476	607	7.09e-23	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000144971

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 30 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933430I17Rik	G	T	4: 62,461,981 (GRCm39)		probably null	Het
9230109A22Rik	G	T	15: 25,139,201 (GRCm39)		noncoding transcript	Het
Acd	A	T	8: 106,425,086 (GRCm39)	Y378N	probably damaging	Het
Adcy9	A	G	16: 4,112,560 (GRCm39)	V709A	probably benign	Het
Axl	A	T	7: 25,485,324 (GRCm39)	L168H	probably benign	Het
Barhl2	C	T	5: 106,603,365 (GRCm39)	A265T	possibly damaging	Het
Drd3	G	A	16: 43,582,684 (GRCm39)	R59H	probably benign	Het
Erlec1	T	C	11: 30,898,510 (GRCm39)	N180S	possibly damaging	Het
Fnip2	G	T	3: 79,388,828 (GRCm39)	S634R	probably benign	Het
Focad	A	T	4: 88,275,711 (GRCm39)	T1107S	unknown	Het
Gigyf1	C	T	5: 137,517,210 (GRCm39)		probably benign	Het
Gpat2	A	G	2: 127,274,316 (GRCm39)	T353A	probably benign	Het
H2bc3	G	T	13: 23,931,111 (GRCm39)	V112L	possibly damaging	Het
Hip1	A	G	5: 135,478,676 (GRCm39)	F178L	probably damaging	Het
Igkv6-13	A	T	6: 70,434,645 (GRCm39)	S67T	probably damaging	Het
Iqch	T	C	9: 63,387,936 (GRCm39)	T824A	probably damaging	Het
Kansl1	A	G	11: 104,315,292 (GRCm39)	S249P	probably damaging	Het
Large1	C	T	8: 73,858,611 (GRCm39)	A86T	probably benign	Het
Lysmd3	C	T	13: 81,813,363 (GRCm39)	A77V	probably damaging	Het
Npr3	T	A	15: 11,895,780 (GRCm39)	S289C	probably damaging	Het
Or52n2	A	T	7: 104,542,179 (GRCm39)	S219T	probably damaging	Het
Or5p57	A	G	7: 107,665,495 (GRCm39)	V140A	probably benign	Het
Pear1	C	T	3: 87,659,423 (GRCm39)	V804I	possibly damaging	Het
Rgs11	T	A	17: 26,426,371 (GRCm39)	I230N	probably damaging	Het
Slc13a3	A	T	2: 165,315,017 (GRCm39)	L22Q	possibly damaging	Het
Slc5a9	A	G	4: 111,755,766 (GRCm39)	V44A	probably damaging	Het
Ttc12	G	T	9: 49,382,506 (GRCm39)		probably null	Het
Vmn2r2	A	G	3: 64,041,319 (GRCm39)		probably benign	Het
Zc3h18	T	C	8: 123,113,591 (GRCm39)		probably benign	Het
Zfp354a	G	A	11: 50,960,190 (GRCm39)	E132K	probably benign	Het

Other mutations in Galnt11

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01553:Galnt11	APN	5	25,452,718 (GRCm39)	missense	probably benign	0.13
IGL01748:Galnt11	APN	5	25,452,513 (GRCm39)	nonsense	probably null
R0021:Galnt11	UTSW	5	25,453,855 (GRCm39)	missense	probably damaging	1.00
R0021:Galnt11	UTSW	5	25,453,855 (GRCm39)	missense	probably damaging	1.00
R0666:Galnt11	UTSW	5	25,457,145 (GRCm39)	missense	possibly damaging	0.89
R0784:Galnt11	UTSW	5	25,463,907 (GRCm39)	missense	probably damaging	1.00
R1136:Galnt11	UTSW	5	25,463,943 (GRCm39)	missense	probably damaging	0.98
R1168:Galnt11	UTSW	5	25,455,244 (GRCm39)	missense	probably damaging	1.00
R1617:Galnt11	UTSW	5	25,463,891 (GRCm39)	missense	probably damaging	1.00
R2033:Galnt11	UTSW	5	25,452,536 (GRCm39)	missense	probably damaging	1.00
R2507:Galnt11	UTSW	5	25,452,610 (GRCm39)	missense	probably damaging	1.00
R2508:Galnt11	UTSW	5	25,452,610 (GRCm39)	missense	probably damaging	1.00
R4237:Galnt11	UTSW	5	25,470,258 (GRCm39)	missense	probably benign	0.02
R4944:Galnt11	UTSW	5	25,470,336 (GRCm39)	missense	probably damaging	1.00
R5653:Galnt11	UTSW	5	25,453,856 (GRCm39)	missense	probably damaging	1.00
R5917:Galnt11	UTSW	5	25,452,670 (GRCm39)	splice site	probably null
R6489:Galnt11	UTSW	5	25,469,964 (GRCm39)	missense	probably damaging	0.99
R6696:Galnt11	UTSW	5	25,460,112 (GRCm39)	missense	probably benign
R6709:Galnt11	UTSW	5	25,453,851 (GRCm39)	missense	probably damaging	1.00
R6881:Galnt11	UTSW	5	25,455,097 (GRCm39)	missense	possibly damaging	0.69
R7034:Galnt11	UTSW	5	25,463,811 (GRCm39)	missense	probably damaging	0.99
R7036:Galnt11	UTSW	5	25,463,811 (GRCm39)	missense	probably damaging	0.99
R8734:Galnt11	UTSW	5	25,455,222 (GRCm39)	missense	possibly damaging	0.95
R8992:Galnt11	UTSW	5	25,469,983 (GRCm39)	missense	possibly damaging	0.81
X0038:Galnt11	UTSW	5	25,462,492 (GRCm39)	missense	probably damaging	1.00

Posted On

2012-04-20