Incidental Mutation 'R0241:Brd7'
ID |
66191 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Brd7
|
Ensembl Gene |
ENSMUSG00000031660 |
Gene Name |
bromodomain containing 7 |
Synonyms |
BP75, CELTIX1, bromodomain protein 75 kDa |
MMRRC Submission |
038479-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.746)
|
Stock # |
R0241 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
8 |
Chromosomal Location |
89057667-89088822 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 89072478 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Tryptophan
at position 331
(R331W)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000034085
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000034085]
|
AlphaFold |
O88665 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000034085
AA Change: R331W
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000034085 Gene: ENSMUSG00000031660 AA Change: R331W
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
68 |
N/A |
INTRINSIC |
low complexity region
|
76 |
96 |
N/A |
INTRINSIC |
BROMO
|
129 |
237 |
9.72e-38 |
SMART |
Pfam:DUF3512
|
287 |
534 |
2.4e-93 |
PFAM |
coiled coil region
|
535 |
564 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000145609
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149841
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 98.6%
- 3x: 97.1%
- 10x: 89.8%
- 20x: 65.7%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein which is a member of the bromodomain-containing protein family. The product of this gene has been identified as a component of one form of the SWI/SNF chromatin remodeling complex, and as a protein which interacts with p53 and is required for p53-dependent oncogene-induced senescence which prevents tumor growth. Pseudogenes have been described on chromosomes 2, 3, 6, 13 and 14. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2010] PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired cognitive behavior and dendrite morphology in the medial prefrontal cortex. Mice homozygous for a different knock-out allele die in utero prior to E16.5, showing fetal growth retardation and altered limb, blood vessel and organ development. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 45 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adck2 |
T |
A |
6: 39,560,752 (GRCm39) |
V380E |
probably benign |
Het |
Anapc1 |
A |
T |
2: 128,470,549 (GRCm39) |
M1527K |
possibly damaging |
Het |
Bicra |
A |
T |
7: 15,709,070 (GRCm39) |
M1188K |
probably damaging |
Het |
Cactin |
A |
G |
10: 81,158,486 (GRCm39) |
T151A |
probably benign |
Het |
Cadps |
G |
A |
14: 12,376,675 (GRCm38) |
T1274M |
probably damaging |
Het |
Catsper3 |
T |
C |
13: 55,952,667 (GRCm39) |
M175T |
probably damaging |
Het |
Chd5 |
A |
G |
4: 152,450,589 (GRCm39) |
D605G |
probably damaging |
Het |
Chst12 |
G |
A |
5: 140,510,054 (GRCm39) |
R227H |
possibly damaging |
Het |
Cobl |
A |
T |
11: 12,204,524 (GRCm39) |
V644E |
probably benign |
Het |
Ddx31 |
A |
G |
2: 28,738,303 (GRCm39) |
T155A |
probably damaging |
Het |
Dnah3 |
T |
C |
7: 119,521,953 (GRCm39) |
Q4069R |
probably damaging |
Het |
Dnah8 |
T |
C |
17: 30,984,653 (GRCm39) |
I3117T |
probably damaging |
Het |
Doc2b |
A |
G |
11: 75,663,387 (GRCm39) |
V355A |
probably damaging |
Het |
Dock10 |
A |
T |
1: 80,556,340 (GRCm39) |
S578T |
probably benign |
Het |
Fcer2a |
A |
G |
8: 3,738,796 (GRCm39) |
|
probably null |
Het |
Fmnl1 |
G |
A |
11: 103,072,996 (GRCm39) |
|
probably null |
Het |
Git2 |
T |
C |
5: 114,871,290 (GRCm39) |
E208G |
probably damaging |
Het |
Hs6st3 |
T |
C |
14: 119,376,232 (GRCm39) |
F136L |
probably benign |
Het |
Hydin |
G |
A |
8: 111,124,655 (GRCm39) |
V555I |
probably benign |
Het |
Kmt2b |
A |
G |
7: 30,276,494 (GRCm39) |
L1726S |
probably damaging |
Het |
Loxl3 |
A |
G |
6: 83,027,114 (GRCm39) |
D615G |
probably damaging |
Het |
Nfasc |
C |
A |
1: 132,564,731 (GRCm39) |
A70S |
probably benign |
Het |
Or4d1 |
T |
A |
11: 87,804,860 (GRCm39) |
N291Y |
probably damaging |
Het |
Or4p21 |
A |
T |
2: 88,276,889 (GRCm39) |
M131K |
possibly damaging |
Het |
Or52n4 |
A |
G |
7: 104,294,450 (GRCm39) |
M41T |
probably benign |
Het |
Or5g29 |
A |
G |
2: 85,421,154 (GRCm39) |
K90R |
probably benign |
Het |
Pde7b |
A |
G |
10: 20,311,962 (GRCm39) |
C239R |
probably damaging |
Het |
Pdzd2 |
A |
T |
15: 12,368,027 (GRCm39) |
L2654Q |
probably damaging |
Het |
Pgap1 |
T |
C |
1: 54,575,110 (GRCm39) |
|
probably null |
Het |
Proz |
T |
A |
8: 13,115,356 (GRCm39) |
M124K |
probably benign |
Het |
Raet1d |
A |
G |
10: 22,247,328 (GRCm39) |
T135A |
probably benign |
Het |
Rapgef1 |
A |
G |
2: 29,592,682 (GRCm39) |
N558S |
possibly damaging |
Het |
Sfi1 |
CCTCTC |
CCTCTCTC |
11: 3,127,419 (GRCm39) |
|
probably benign |
Het |
Simc1 |
G |
T |
13: 54,698,338 (GRCm39) |
L1319F |
probably damaging |
Het |
Sspo |
A |
G |
6: 48,438,429 (GRCm39) |
E1499G |
possibly damaging |
Het |
Tas2r118 |
T |
C |
6: 23,969,338 (GRCm39) |
Y241C |
probably damaging |
Het |
Tbck |
A |
G |
3: 132,430,636 (GRCm39) |
E344G |
probably benign |
Het |
Tcam1 |
G |
A |
11: 106,174,904 (GRCm39) |
E120K |
probably benign |
Het |
Tmbim7 |
A |
T |
5: 3,716,866 (GRCm39) |
Y66F |
probably benign |
Het |
Vil1 |
T |
C |
1: 74,465,853 (GRCm39) |
L548P |
probably damaging |
Het |
Wdr3 |
A |
G |
3: 100,052,973 (GRCm39) |
V593A |
probably damaging |
Het |
Zan |
T |
C |
5: 137,420,084 (GRCm39) |
T2858A |
unknown |
Het |
Zbtb37 |
A |
T |
1: 160,847,939 (GRCm39) |
V356E |
probably benign |
Het |
Zfp36 |
C |
T |
7: 28,077,759 (GRCm39) |
V50I |
probably damaging |
Het |
Zfp563 |
A |
T |
17: 33,323,659 (GRCm39) |
S85C |
possibly damaging |
Het |
|
Other mutations in Brd7 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01947:Brd7
|
APN |
8 |
89,059,503 (GRCm39) |
unclassified |
probably benign |
|
IGL02172:Brd7
|
APN |
8 |
89,078,452 (GRCm39) |
missense |
probably benign |
0.41 |
IGL02441:Brd7
|
APN |
8 |
89,070,218 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Brd7
|
UTSW |
8 |
89,072,478 (GRCm39) |
missense |
probably benign |
0.01 |
R0845:Brd7
|
UTSW |
8 |
89,069,395 (GRCm39) |
nonsense |
probably null |
|
R1613:Brd7
|
UTSW |
8 |
89,073,578 (GRCm39) |
missense |
probably benign |
0.00 |
R1659:Brd7
|
UTSW |
8 |
89,060,420 (GRCm39) |
missense |
probably damaging |
1.00 |
R1663:Brd7
|
UTSW |
8 |
89,084,651 (GRCm39) |
missense |
possibly damaging |
0.87 |
R2237:Brd7
|
UTSW |
8 |
89,073,541 (GRCm39) |
missense |
probably benign |
0.22 |
R2280:Brd7
|
UTSW |
8 |
89,069,385 (GRCm39) |
missense |
probably benign |
0.00 |
R2916:Brd7
|
UTSW |
8 |
89,069,408 (GRCm39) |
missense |
probably damaging |
0.98 |
R2917:Brd7
|
UTSW |
8 |
89,069,408 (GRCm39) |
missense |
probably damaging |
0.98 |
R3770:Brd7
|
UTSW |
8 |
89,066,035 (GRCm39) |
critical splice donor site |
probably null |
|
R4030:Brd7
|
UTSW |
8 |
89,059,559 (GRCm39) |
missense |
probably damaging |
1.00 |
R5287:Brd7
|
UTSW |
8 |
89,084,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R5403:Brd7
|
UTSW |
8 |
89,084,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R6333:Brd7
|
UTSW |
8 |
89,071,819 (GRCm39) |
missense |
probably damaging |
1.00 |
R7021:Brd7
|
UTSW |
8 |
89,073,632 (GRCm39) |
missense |
probably benign |
0.00 |
R7072:Brd7
|
UTSW |
8 |
89,073,615 (GRCm39) |
missense |
probably benign |
|
R7445:Brd7
|
UTSW |
8 |
89,088,336 (GRCm39) |
missense |
probably damaging |
1.00 |
R7482:Brd7
|
UTSW |
8 |
89,088,254 (GRCm39) |
missense |
probably damaging |
0.99 |
R7977:Brd7
|
UTSW |
8 |
89,060,769 (GRCm39) |
missense |
probably benign |
|
R7987:Brd7
|
UTSW |
8 |
89,060,769 (GRCm39) |
missense |
probably benign |
|
R8205:Brd7
|
UTSW |
8 |
89,070,243 (GRCm39) |
missense |
probably damaging |
1.00 |
R8814:Brd7
|
UTSW |
8 |
89,071,782 (GRCm39) |
missense |
probably benign |
0.00 |
R8984:Brd7
|
UTSW |
8 |
89,081,340 (GRCm39) |
missense |
probably benign |
0.00 |
R9190:Brd7
|
UTSW |
8 |
89,081,274 (GRCm39) |
missense |
probably damaging |
1.00 |
R9296:Brd7
|
UTSW |
8 |
89,059,560 (GRCm39) |
missense |
possibly damaging |
0.46 |
X0067:Brd7
|
UTSW |
8 |
89,070,325 (GRCm39) |
splice site |
probably null |
|
|
Predicted Primers |
|
Posted On |
2013-08-19 |