Incidental Mutation 'T0970:Wtap'
ID |
67271 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Wtap
|
Ensembl Gene |
ENSMUSG00000060475 |
Gene Name |
WT1 associating protein |
Synonyms |
2810408K05Rik, 9430038B09Rik |
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
T0970 (G3)
of strain
713
|
Quality Score |
141 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
13185686-13211430 bp(-) (GRCm39) |
Type of Mutation |
unclassified |
DNA Base Change (assembly) |
T to C
at 13188277 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000124138
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000007007]
[ENSMUST00000159551]
[ENSMUST00000159986]
[ENSMUST00000160781]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000007007
|
SMART Domains |
Protein: ENSMUSP00000007007 Gene: ENSMUSG00000060475
Domain | Start | End | E-Value | Type |
low complexity region
|
57 |
69 |
N/A |
INTRINSIC |
coiled coil region
|
121 |
148 |
N/A |
INTRINSIC |
coiled coil region
|
177 |
248 |
N/A |
INTRINSIC |
low complexity region
|
278 |
291 |
N/A |
INTRINSIC |
low complexity region
|
305 |
327 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000159551
|
SMART Domains |
Protein: ENSMUSP00000124205 Gene: ENSMUSG00000060475
Domain | Start | End | E-Value | Type |
Pfam:Wtap
|
1 |
248 |
2.8e-157 |
PFAM |
low complexity region
|
278 |
291 |
N/A |
INTRINSIC |
low complexity region
|
305 |
327 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000159986
|
SMART Domains |
Protein: ENSMUSP00000123961 Gene: ENSMUSG00000060475
Domain | Start | End | E-Value | Type |
low complexity region
|
57 |
69 |
N/A |
INTRINSIC |
coiled coil region
|
121 |
148 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000160781
|
SMART Domains |
Protein: ENSMUSP00000124138 Gene: ENSMUSG00000060475
Domain | Start | End | E-Value | Type |
low complexity region
|
57 |
69 |
N/A |
INTRINSIC |
coiled coil region
|
121 |
148 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 99.5%
- 3x: 98.9%
- 10x: 97.3%
- 20x: 94.7%
|
Validation Efficiency |
100% (25/25) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The Wilms tumor suppressor gene WT1 appears to play a role in both transcriptional and posttranscriptional regulation of certain cellular genes. This gene encodes a WT1-associating protein, which is a ubiquitously expressed nuclear protein. Like WT1 protein, this protein is localized throughout the nucleoplasm as well as in speckles and partially colocalizes with splicing factors. Alternative splicing of this gene results in several transcript variants encoding three different isoforms. [provided by RefSeq, Jul 2012] PHENOTYPE: Mice homozygous for a mutation display lethality during embryogenesis with abnormalities appearing during gastrulation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 23 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Ano4 |
A |
T |
10: 88,817,052 (GRCm39) |
L591* |
probably null |
Het |
Aqp4 |
A |
G |
18: 15,532,940 (GRCm39) |
L51P |
probably damaging |
Het |
Cemip |
A |
T |
7: 83,632,354 (GRCm39) |
C403S |
probably damaging |
Het |
Cfap74 |
G |
T |
4: 155,547,574 (GRCm39) |
|
probably null |
Het |
Glis3 |
G |
A |
19: 28,508,332 (GRCm39) |
R551W |
probably damaging |
Het |
Gm11232 |
T |
A |
4: 71,674,740 (GRCm39) |
Y254F |
possibly damaging |
Het |
Map3k14 |
G |
T |
11: 103,115,124 (GRCm39) |
C837* |
probably null |
Het |
Mrc2 |
A |
C |
11: 105,238,453 (GRCm39) |
E1200A |
probably benign |
Het |
Nfix |
T |
C |
8: 85,453,112 (GRCm39) |
N314S |
possibly damaging |
Het |
Nphp4 |
T |
C |
4: 152,640,836 (GRCm39) |
S1068P |
probably damaging |
Het |
Nup98 |
A |
C |
7: 101,835,959 (GRCm39) |
|
probably benign |
Het |
Or13p8 |
A |
G |
4: 118,583,464 (GRCm39) |
R7G |
probably benign |
Het |
Pcdhac2 |
T |
C |
18: 37,278,388 (GRCm39) |
V456A |
possibly damaging |
Het |
Pcdhb1 |
G |
T |
18: 37,399,026 (GRCm39) |
G326C |
probably damaging |
Het |
Prss38 |
A |
G |
11: 59,263,974 (GRCm39) |
V246A |
possibly damaging |
Het |
Rnf26 |
C |
G |
9: 44,023,369 (GRCm39) |
R172P |
probably damaging |
Het |
Septin4 |
A |
T |
11: 87,458,558 (GRCm39) |
T311S |
probably damaging |
Het |
Serinc3 |
TATCATC |
TATC |
2: 163,469,835 (GRCm39) |
|
probably benign |
Het |
Spire1 |
C |
A |
18: 67,634,133 (GRCm39) |
|
probably null |
Het |
Tex2 |
T |
A |
11: 106,437,772 (GRCm39) |
I633F |
unknown |
Het |
Tle2 |
A |
G |
10: 81,416,119 (GRCm39) |
D108G |
possibly damaging |
Het |
Txnrd2 |
T |
C |
16: 18,260,523 (GRCm39) |
V185A |
probably damaging |
Het |
Unc45b |
C |
A |
11: 82,813,714 (GRCm39) |
H374N |
probably benign |
Het |
|
Other mutations in Wtap |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01305:Wtap
|
APN |
17 |
13,186,782 (GRCm39) |
missense |
probably benign |
0.08 |
IGL01867:Wtap
|
APN |
17 |
13,188,342 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02379:Wtap
|
APN |
17 |
13,188,336 (GRCm39) |
missense |
probably benign |
|
IGL02437:Wtap
|
APN |
17 |
13,186,620 (GRCm39) |
missense |
probably benign |
|
IGL02975:Wtap
|
APN |
17 |
13,202,398 (GRCm39) |
missense |
possibly damaging |
0.85 |
ANU22:Wtap
|
UTSW |
17 |
13,186,782 (GRCm39) |
missense |
probably benign |
0.08 |
R1457:Wtap
|
UTSW |
17 |
13,200,631 (GRCm39) |
splice site |
probably null |
|
R1799:Wtap
|
UTSW |
17 |
13,199,771 (GRCm39) |
missense |
possibly damaging |
0.96 |
R2240:Wtap
|
UTSW |
17 |
13,194,352 (GRCm39) |
nonsense |
probably null |
|
R2328:Wtap
|
UTSW |
17 |
13,186,425 (GRCm39) |
missense |
possibly damaging |
0.53 |
R2332:Wtap
|
UTSW |
17 |
13,186,425 (GRCm39) |
missense |
possibly damaging |
0.53 |
R3426:Wtap
|
UTSW |
17 |
13,186,425 (GRCm39) |
missense |
possibly damaging |
0.53 |
R4382:Wtap
|
UTSW |
17 |
13,194,307 (GRCm39) |
missense |
probably damaging |
0.99 |
R4703:Wtap
|
UTSW |
17 |
13,199,711 (GRCm39) |
missense |
probably benign |
0.23 |
R4879:Wtap
|
UTSW |
17 |
13,188,322 (GRCm39) |
missense |
probably damaging |
0.99 |
R4956:Wtap
|
UTSW |
17 |
13,186,423 (GRCm39) |
missense |
probably benign |
0.06 |
R5044:Wtap
|
UTSW |
17 |
13,186,525 (GRCm39) |
missense |
possibly damaging |
0.47 |
R6366:Wtap
|
UTSW |
17 |
13,186,945 (GRCm39) |
splice site |
probably null |
|
R6813:Wtap
|
UTSW |
17 |
13,186,397 (GRCm39) |
missense |
probably damaging |
0.96 |
R7324:Wtap
|
UTSW |
17 |
13,199,833 (GRCm39) |
missense |
possibly damaging |
0.91 |
R7443:Wtap
|
UTSW |
17 |
13,199,821 (GRCm39) |
missense |
probably benign |
0.05 |
R7810:Wtap
|
UTSW |
17 |
13,199,797 (GRCm39) |
missense |
probably damaging |
0.99 |
R7939:Wtap
|
UTSW |
17 |
13,200,683 (GRCm39) |
nonsense |
probably null |
|
R8787:Wtap
|
UTSW |
17 |
13,186,488 (GRCm39) |
missense |
possibly damaging |
0.93 |
X0067:Wtap
|
UTSW |
17 |
13,204,816 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TTGGCTTTCTTTGCAACCAAGAACC -3'
(R):5'- TGGCGAAGTGTCGAATGCTTATCC -3'
Sequencing Primer
(F):5'- GAAGACACTGTTAGTGATGCTC -3'
(R):5'- TGTCGAATGCTTATCCAGGAGAAC -3'
|
Posted On |
2013-09-03 |