Incidental Mutation 'R0730:Chd5'
ID |
67450 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd5
|
Ensembl Gene |
ENSMUSG00000005045 |
Gene Name |
chromodomain helicase DNA binding protein 5 |
Synonyms |
B230399N07Rik, 4930532L22Rik |
MMRRC Submission |
038911-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0730 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
152423108-152474651 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 152432441 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 43
(E43G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000132600
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000005175]
[ENSMUST00000030775]
[ENSMUST00000164662]
|
AlphaFold |
A2A8L1 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000005175
AA Change: E43G
PolyPhen 2
Score 0.719 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000005175 Gene: ENSMUSG00000005045 AA Change: E43G
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
2e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1729 |
1901 |
1.7e-99 |
PFAM |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000030775
AA Change: E43G
PolyPhen 2
Score 0.719 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000030775 Gene: ENSMUSG00000005045 AA Change: E43G
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
150 |
203 |
9e-28 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1730 |
1901 |
2.8e-93 |
PFAM |
low complexity region
|
1922 |
1936 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000136134
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000145163
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000164662
AA Change: E43G
PolyPhen 2
Score 0.719 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000132600 Gene: ENSMUSG00000005045 AA Change: E43G
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
1.9e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1260 |
1324 |
2.78e-33 |
SMART |
DUF1086
|
1337 |
1496 |
5.11e-105 |
SMART |
low complexity region
|
1515 |
1530 |
N/A |
INTRINSIC |
low complexity region
|
1648 |
1664 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1692 |
1864 |
1.7e-99 |
PFAM |
low complexity region
|
1885 |
1899 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0612 |
Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.9%
- 10x: 97.8%
- 20x: 96.1%
|
Validation Efficiency |
99% (99/100) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the chromodomain helicase DNA-binding protein family. Members of this family are characterized by a chromodomain, a helicase ATP-binding domain and an additional functional domain. This gene encodes a neuron-specific protein that may function in chromatin remodeling and gene transcription. This gene is a potential tumor suppressor gene that may play a role in the development of neuroblastoma. [provided by RefSeq, Feb 2012] PHENOTYPE: Mice homozygous for a knock-out allele exhibit male infertility with abnormal spermiogenesis and chromatin condensation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 99 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam9 |
A |
T |
8: 25,486,774 (GRCm39) |
I168N |
probably benign |
Het |
Adamts20 |
G |
A |
15: 94,245,571 (GRCm39) |
A577V |
probably benign |
Het |
Agtr1a |
A |
T |
13: 30,565,279 (GRCm39) |
S115C |
probably damaging |
Het |
Ankrd11 |
T |
C |
8: 123,618,692 (GRCm39) |
Y1720C |
probably damaging |
Het |
Ano6 |
A |
T |
15: 95,818,252 (GRCm39) |
T353S |
probably damaging |
Het |
App |
A |
G |
16: 84,876,840 (GRCm39) |
F184L |
probably damaging |
Het |
Arhgef38 |
T |
A |
3: 132,843,232 (GRCm39) |
Y446F |
probably benign |
Het |
Aspg |
T |
A |
12: 112,078,693 (GRCm39) |
Y57* |
probably null |
Het |
Atp1a4 |
G |
A |
1: 172,067,774 (GRCm39) |
|
probably benign |
Het |
Bdp1 |
G |
A |
13: 100,195,459 (GRCm39) |
|
probably benign |
Het |
Bicd2 |
T |
A |
13: 49,531,717 (GRCm39) |
S246T |
possibly damaging |
Het |
Brd10 |
T |
A |
19: 29,695,381 (GRCm39) |
I1438F |
probably benign |
Het |
Bsn |
T |
A |
9: 107,984,011 (GRCm39) |
M3348L |
unknown |
Het |
Cacna1c |
C |
T |
6: 118,589,586 (GRCm39) |
R1446H |
probably damaging |
Het |
Cacna2d3 |
T |
C |
14: 28,704,322 (GRCm39) |
I820V |
probably benign |
Het |
Cdc40 |
A |
G |
10: 40,720,952 (GRCm39) |
|
probably benign |
Het |
Cdh23 |
T |
C |
10: 60,159,493 (GRCm39) |
E2094G |
probably damaging |
Het |
Celsr2 |
T |
A |
3: 108,305,922 (GRCm39) |
N2061Y |
probably damaging |
Het |
Cfap206 |
G |
A |
4: 34,711,391 (GRCm39) |
A502V |
probably benign |
Het |
Cfap54 |
T |
C |
10: 92,870,599 (GRCm39) |
T29A |
probably benign |
Het |
Cfap57 |
T |
C |
4: 118,470,117 (GRCm39) |
|
probably null |
Het |
Clk1 |
G |
A |
1: 58,453,558 (GRCm39) |
H343Y |
probably benign |
Het |
Cntn4 |
A |
C |
6: 106,527,447 (GRCm39) |
K443T |
probably damaging |
Het |
Csn2 |
G |
A |
5: 87,842,811 (GRCm39) |
A72V |
possibly damaging |
Het |
Ctdp1 |
T |
A |
18: 80,493,457 (GRCm39) |
H346L |
probably benign |
Het |
Ctif |
A |
T |
18: 75,698,083 (GRCm39) |
N192K |
probably damaging |
Het |
Ddr2 |
G |
A |
1: 169,823,135 (GRCm39) |
A383V |
probably benign |
Het |
Derl3 |
C |
T |
10: 75,731,076 (GRCm39) |
|
probably benign |
Het |
Dgkh |
T |
C |
14: 78,821,919 (GRCm39) |
I865V |
probably damaging |
Het |
Dip2b |
C |
T |
15: 100,069,532 (GRCm39) |
A619V |
probably damaging |
Het |
Elapor1 |
T |
A |
3: 108,376,851 (GRCm39) |
H509L |
probably benign |
Het |
Eml1 |
A |
G |
12: 108,496,585 (GRCm39) |
T614A |
possibly damaging |
Het |
Eogt |
G |
C |
6: 97,092,970 (GRCm39) |
Y402* |
probably null |
Het |
Erbb4 |
A |
G |
1: 68,298,449 (GRCm39) |
V647A |
probably damaging |
Het |
Esm1 |
G |
T |
13: 113,350,036 (GRCm39) |
|
probably null |
Het |
Fbxo31 |
A |
G |
8: 122,282,103 (GRCm39) |
|
probably benign |
Het |
Fbxw5 |
T |
A |
2: 25,394,630 (GRCm39) |
D201E |
possibly damaging |
Het |
Fgfr1 |
G |
A |
8: 26,045,760 (GRCm39) |
D123N |
probably benign |
Het |
G530012D18Rik |
A |
C |
1: 85,504,757 (GRCm39) |
|
probably benign |
Het |
Gnat1 |
G |
A |
9: 107,556,662 (GRCm39) |
T29I |
probably damaging |
Het |
Gtf2ird2 |
A |
T |
5: 134,221,597 (GRCm39) |
R67* |
probably null |
Het |
Il22b |
A |
T |
10: 118,130,142 (GRCm39) |
D87E |
probably benign |
Het |
Kcnq3 |
T |
C |
15: 65,867,457 (GRCm39) |
T729A |
probably benign |
Het |
Klrc2 |
A |
T |
6: 129,635,659 (GRCm39) |
S156R |
probably damaging |
Het |
Krt76 |
A |
T |
15: 101,795,784 (GRCm39) |
L462Q |
probably damaging |
Het |
Lama3 |
C |
A |
18: 12,589,907 (GRCm39) |
|
probably benign |
Het |
Lin28a |
A |
T |
4: 133,735,319 (GRCm39) |
S56T |
probably damaging |
Het |
Macf1 |
A |
G |
4: 123,276,323 (GRCm39) |
|
probably benign |
Het |
Macrod2 |
C |
T |
2: 142,059,594 (GRCm39) |
|
probably benign |
Het |
Mansc1 |
C |
T |
6: 134,594,424 (GRCm39) |
|
probably benign |
Het |
Map1b |
G |
T |
13: 99,566,274 (GRCm39) |
S2149* |
probably null |
Het |
Mgst1 |
A |
T |
6: 138,124,667 (GRCm39) |
T34S |
probably benign |
Het |
Mlf2 |
C |
T |
6: 124,911,354 (GRCm39) |
T123M |
probably damaging |
Het |
Mospd2 |
C |
T |
X: 163,731,253 (GRCm39) |
|
probably benign |
Het |
Mrpl15 |
A |
T |
1: 4,847,834 (GRCm39) |
V155E |
probably damaging |
Het |
Mstn |
A |
T |
1: 53,100,953 (GRCm39) |
Y10F |
possibly damaging |
Het |
Myo1g |
C |
T |
11: 6,470,794 (GRCm39) |
V21M |
probably damaging |
Het |
Myom2 |
T |
C |
8: 15,149,326 (GRCm39) |
I599T |
probably benign |
Het |
Ndc80 |
A |
T |
17: 71,803,241 (GRCm39) |
N633K |
probably benign |
Het |
Nhs |
C |
A |
X: 160,620,296 (GRCm39) |
V1487L |
possibly damaging |
Het |
Npc1 |
T |
C |
18: 12,352,382 (GRCm39) |
T106A |
probably benign |
Het |
Nup133 |
C |
T |
8: 124,675,747 (GRCm39) |
V57M |
probably benign |
Het |
Nup98 |
T |
A |
7: 101,809,923 (GRCm39) |
T536S |
probably damaging |
Het |
Oprm1 |
T |
C |
10: 6,782,652 (GRCm39) |
|
probably benign |
Het |
Or5j1 |
T |
C |
2: 86,879,492 (GRCm39) |
I29M |
probably benign |
Het |
Or6c219 |
T |
A |
10: 129,780,980 (GRCm39) |
H317L |
probably benign |
Het |
Or8j3 |
A |
G |
2: 86,029,069 (GRCm39) |
V9A |
probably benign |
Het |
Ostf1 |
C |
T |
19: 18,581,571 (GRCm39) |
V14I |
unknown |
Het |
Pcdhb14 |
C |
A |
18: 37,581,921 (GRCm39) |
D342E |
probably damaging |
Het |
Pdia3 |
G |
A |
2: 121,262,858 (GRCm39) |
G275S |
probably damaging |
Het |
Pdpr |
T |
C |
8: 111,852,387 (GRCm39) |
|
probably null |
Het |
Plce1 |
G |
A |
19: 38,705,135 (GRCm39) |
V847M |
probably damaging |
Het |
Pon3 |
A |
G |
6: 5,230,444 (GRCm39) |
M288T |
probably benign |
Het |
Psd2 |
A |
T |
18: 36,111,627 (GRCm39) |
D84V |
possibly damaging |
Het |
Ptpro |
T |
A |
6: 137,420,592 (GRCm39) |
V1007D |
probably damaging |
Het |
Ralgapa1 |
T |
C |
12: 55,712,448 (GRCm39) |
K1808E |
probably damaging |
Het |
Ramp3 |
T |
C |
11: 6,626,476 (GRCm39) |
|
probably benign |
Het |
Rasgrf1 |
T |
A |
9: 89,833,062 (GRCm39) |
|
probably benign |
Het |
Rictor |
A |
G |
15: 6,803,467 (GRCm39) |
|
probably benign |
Het |
Rptor |
A |
T |
11: 119,775,780 (GRCm39) |
I984F |
probably benign |
Het |
Slc1a6 |
C |
T |
10: 78,631,842 (GRCm39) |
P223S |
probably benign |
Het |
Taar8b |
A |
C |
10: 23,967,924 (GRCm39) |
V90G |
probably damaging |
Het |
Tbc1d21 |
A |
G |
9: 58,267,160 (GRCm39) |
V327A |
probably benign |
Het |
Tex21 |
T |
C |
12: 76,250,940 (GRCm39) |
T499A |
probably benign |
Het |
Tg |
A |
T |
15: 66,550,638 (GRCm39) |
D256V |
probably damaging |
Het |
Tmf1 |
A |
G |
6: 97,153,453 (GRCm39) |
S207P |
probably benign |
Het |
Tpr |
A |
G |
1: 150,269,158 (GRCm39) |
|
probably benign |
Het |
Ufd1 |
A |
G |
16: 18,633,637 (GRCm39) |
T21A |
probably damaging |
Het |
Unc13a |
T |
C |
8: 72,108,929 (GRCm39) |
D115G |
possibly damaging |
Het |
Usb1 |
T |
A |
8: 96,070,669 (GRCm39) |
F198L |
probably damaging |
Het |
Utrn |
A |
T |
10: 12,573,902 (GRCm39) |
|
probably benign |
Het |
Vars1 |
A |
G |
17: 35,233,276 (GRCm39) |
N954S |
probably damaging |
Het |
Wdr17 |
C |
T |
8: 55,146,131 (GRCm39) |
A90T |
possibly damaging |
Het |
Wdr33 |
C |
T |
18: 31,968,429 (GRCm39) |
|
probably benign |
Het |
Zfp236 |
A |
G |
18: 82,658,369 (GRCm39) |
|
probably benign |
Het |
Zfp445 |
A |
T |
9: 122,690,823 (GRCm39) |
V124E |
probably damaging |
Het |
Zfp616 |
A |
T |
11: 73,975,648 (GRCm39) |
H639L |
probably damaging |
Het |
Zfyve16 |
C |
A |
13: 92,657,985 (GRCm39) |
S642I |
probably damaging |
Het |
Zswim5 |
C |
T |
4: 116,842,943 (GRCm39) |
T896I |
possibly damaging |
Het |
|
Other mutations in Chd5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00537:Chd5
|
APN |
4 |
152,445,059 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00886:Chd5
|
APN |
4 |
152,444,156 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00963:Chd5
|
APN |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01399:Chd5
|
APN |
4 |
152,441,144 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01571:Chd5
|
APN |
4 |
152,468,572 (GRCm39) |
splice site |
probably benign |
|
IGL01606:Chd5
|
APN |
4 |
152,445,432 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01636:Chd5
|
APN |
4 |
152,469,110 (GRCm39) |
nonsense |
probably null |
|
IGL02009:Chd5
|
APN |
4 |
152,450,670 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02417:Chd5
|
APN |
4 |
152,451,751 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02504:Chd5
|
APN |
4 |
152,447,779 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02508:Chd5
|
APN |
4 |
152,447,481 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02597:Chd5
|
APN |
4 |
152,456,169 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02608:Chd5
|
APN |
4 |
152,440,564 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02612:Chd5
|
APN |
4 |
152,445,033 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02658:Chd5
|
APN |
4 |
152,445,050 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02662:Chd5
|
APN |
4 |
152,456,588 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02676:Chd5
|
APN |
4 |
152,440,530 (GRCm39) |
splice site |
probably benign |
|
IGL02871:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02942:Chd5
|
APN |
4 |
152,470,182 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02956:Chd5
|
APN |
4 |
152,464,413 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03286:Chd5
|
APN |
4 |
152,469,952 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03348:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03398:Chd5
|
APN |
4 |
152,461,539 (GRCm39) |
missense |
probably damaging |
0.97 |
PIT1430001:Chd5
|
UTSW |
4 |
152,455,094 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4151001:Chd5
|
UTSW |
4 |
152,462,986 (GRCm39) |
missense |
probably damaging |
0.99 |
R0079:Chd5
|
UTSW |
4 |
152,470,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0379:Chd5
|
UTSW |
4 |
152,467,778 (GRCm39) |
missense |
probably benign |
0.00 |
R0388:Chd5
|
UTSW |
4 |
152,456,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R0675:Chd5
|
UTSW |
4 |
152,470,407 (GRCm39) |
missense |
probably benign |
0.06 |
R0799:Chd5
|
UTSW |
4 |
152,468,616 (GRCm39) |
missense |
probably damaging |
1.00 |
R0800:Chd5
|
UTSW |
4 |
152,440,614 (GRCm39) |
missense |
probably damaging |
1.00 |
R1276:Chd5
|
UTSW |
4 |
152,463,191 (GRCm39) |
missense |
probably damaging |
1.00 |
R1752:Chd5
|
UTSW |
4 |
152,459,590 (GRCm39) |
missense |
probably damaging |
1.00 |
R1753:Chd5
|
UTSW |
4 |
152,463,272 (GRCm39) |
missense |
probably damaging |
1.00 |
R1843:Chd5
|
UTSW |
4 |
152,470,263 (GRCm39) |
missense |
probably damaging |
1.00 |
R1850:Chd5
|
UTSW |
4 |
152,454,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R1851:Chd5
|
UTSW |
4 |
152,462,727 (GRCm39) |
missense |
probably damaging |
0.97 |
R1859:Chd5
|
UTSW |
4 |
152,464,980 (GRCm39) |
missense |
probably benign |
0.00 |
R1983:Chd5
|
UTSW |
4 |
152,469,123 (GRCm39) |
missense |
possibly damaging |
0.89 |
R2404:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R2897:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R2898:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R3893:Chd5
|
UTSW |
4 |
152,445,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R3938:Chd5
|
UTSW |
4 |
152,461,512 (GRCm39) |
missense |
probably benign |
0.05 |
R4707:Chd5
|
UTSW |
4 |
152,445,039 (GRCm39) |
missense |
probably damaging |
1.00 |
R4754:Chd5
|
UTSW |
4 |
152,462,203 (GRCm39) |
missense |
probably damaging |
0.99 |
R4911:Chd5
|
UTSW |
4 |
152,445,129 (GRCm39) |
missense |
probably damaging |
1.00 |
R4924:Chd5
|
UTSW |
4 |
152,450,886 (GRCm39) |
missense |
possibly damaging |
0.50 |
R4926:Chd5
|
UTSW |
4 |
152,467,768 (GRCm39) |
missense |
probably benign |
0.00 |
R5256:Chd5
|
UTSW |
4 |
152,456,554 (GRCm39) |
missense |
probably benign |
0.01 |
R5524:Chd5
|
UTSW |
4 |
152,461,087 (GRCm39) |
missense |
probably benign |
|
R5552:Chd5
|
UTSW |
4 |
152,470,272 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5895:Chd5
|
UTSW |
4 |
152,464,389 (GRCm39) |
missense |
probably benign |
0.13 |
R5945:Chd5
|
UTSW |
4 |
152,464,408 (GRCm39) |
missense |
probably benign |
|
R6007:Chd5
|
UTSW |
4 |
152,463,878 (GRCm39) |
missense |
probably null |
1.00 |
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6172:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6173:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6323:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
0.99 |
R6331:Chd5
|
UTSW |
4 |
152,466,865 (GRCm39) |
missense |
probably benign |
0.02 |
R6495:Chd5
|
UTSW |
4 |
152,451,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R6528:Chd5
|
UTSW |
4 |
152,441,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R6849:Chd5
|
UTSW |
4 |
152,462,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R6854:Chd5
|
UTSW |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R6859:Chd5
|
UTSW |
4 |
152,462,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R6999:Chd5
|
UTSW |
4 |
152,458,891 (GRCm39) |
missense |
probably damaging |
1.00 |
R7034:Chd5
|
UTSW |
4 |
152,445,398 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7110:Chd5
|
UTSW |
4 |
152,469,896 (GRCm39) |
missense |
probably damaging |
1.00 |
R7361:Chd5
|
UTSW |
4 |
152,447,745 (GRCm39) |
missense |
probably damaging |
0.99 |
R7397:Chd5
|
UTSW |
4 |
152,452,469 (GRCm39) |
missense |
possibly damaging |
0.82 |
R7440:Chd5
|
UTSW |
4 |
152,469,108 (GRCm39) |
missense |
probably benign |
0.01 |
R7489:Chd5
|
UTSW |
4 |
152,457,925 (GRCm39) |
missense |
probably damaging |
1.00 |
R7810:Chd5
|
UTSW |
4 |
152,443,032 (GRCm39) |
missense |
probably damaging |
0.97 |
R8057:Chd5
|
UTSW |
4 |
152,450,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R8078:Chd5
|
UTSW |
4 |
152,445,448 (GRCm39) |
missense |
possibly damaging |
0.90 |
R8092:Chd5
|
UTSW |
4 |
152,463,261 (GRCm39) |
missense |
probably damaging |
0.99 |
R8170:Chd5
|
UTSW |
4 |
152,461,040 (GRCm39) |
missense |
probably benign |
0.26 |
R8255:Chd5
|
UTSW |
4 |
152,463,880 (GRCm39) |
missense |
probably damaging |
0.99 |
R8348:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8448:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8478:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8482:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8670:Chd5
|
UTSW |
4 |
152,469,953 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8733:Chd5
|
UTSW |
4 |
152,463,923 (GRCm39) |
missense |
probably damaging |
1.00 |
R8743:Chd5
|
UTSW |
4 |
152,450,862 (GRCm39) |
missense |
probably benign |
0.03 |
R8941:Chd5
|
UTSW |
4 |
152,463,305 (GRCm39) |
missense |
possibly damaging |
0.82 |
R8961:Chd5
|
UTSW |
4 |
152,467,489 (GRCm39) |
splice site |
probably benign |
|
R9103:Chd5
|
UTSW |
4 |
152,461,444 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9160:Chd5
|
UTSW |
4 |
152,469,916 (GRCm39) |
missense |
probably damaging |
0.99 |
R9221:Chd5
|
UTSW |
4 |
152,456,122 (GRCm39) |
missense |
probably damaging |
0.96 |
R9399:Chd5
|
UTSW |
4 |
152,468,592 (GRCm39) |
missense |
probably benign |
0.06 |
R9429:Chd5
|
UTSW |
4 |
152,447,364 (GRCm39) |
missense |
probably damaging |
0.99 |
R9635:Chd5
|
UTSW |
4 |
152,461,079 (GRCm39) |
missense |
possibly damaging |
0.87 |
R9783:Chd5
|
UTSW |
4 |
152,458,865 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd5
|
UTSW |
4 |
152,462,936 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Predicted Primers |
PCR Primer
(F):5'- CAGAGCTGACATGACTGTTGTCCC -3'
(R):5'- GGATGCCTGTGAGAAGATGCTGAC -3'
Sequencing Primer
(F):5'- TGACTTAGGACCGTGATCCC -3'
(R):5'- ATAGTGTCACGGTGTCCCAG -3'
|
Posted On |
2013-09-03 |