Incidental Mutation 'IGL01325:Rcl1'
ID 74243
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Rcl1
Ensembl Gene ENSMUSG00000024785
Gene Name RNA terminal phosphate cyclase-like 1
Synonyms RPCL1, 2310040A02Rik, Rnac
Accession Numbers
Essential gene? Probably essential (E-score: 0.967) question?
Stock # IGL01325
Quality Score
Status
Chromosome 19
Chromosomal Location 29078761-29121251 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) A to G at 29098662 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000067579 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000064393] [ENSMUST00000064393]
AlphaFold Q9JJT0
Predicted Effect probably null
Transcript: ENSMUST00000064393
SMART Domains Protein: ENSMUSP00000067579
Gene: ENSMUSG00000024785

DomainStartEndE-ValueType
Pfam:RTC 8 341 1.3e-61 PFAM
Pfam:RTC_insert 184 289 1.8e-37 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000064393
SMART Domains Protein: ENSMUSP00000067579
Gene: ENSMUSG00000024785

DomainStartEndE-ValueType
Pfam:RTC 8 341 1.3e-61 PFAM
Pfam:RTC_insert 184 289 1.8e-37 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930486L24Rik T C 13: 61,001,347 (GRCm39) T127A probably damaging Het
Acrv1 T A 9: 36,609,810 (GRCm39) M227K probably benign Het
Adam22 T C 5: 8,177,333 (GRCm39) N592S probably benign Het
Adamts15 T A 9: 30,832,984 (GRCm39) I184F possibly damaging Het
Adcy1 T C 11: 7,014,102 (GRCm39) V168A possibly damaging Het
Arl6ip5 T C 6: 97,209,501 (GRCm39) F179L probably benign Het
Asxl2 G T 12: 3,477,172 (GRCm39) R6L probably damaging Het
Btaf1 T A 19: 36,982,049 (GRCm39) probably benign Het
Ccdc136 T C 6: 29,412,949 (GRCm39) F445L probably benign Het
Cpne3 T C 4: 19,535,229 (GRCm39) S268G probably benign Het
Crtc3 C T 7: 80,327,116 (GRCm39) R70Q probably damaging Het
Fam169a C A 13: 97,259,207 (GRCm39) A421E probably benign Het
Fhod1 A T 8: 106,058,281 (GRCm39) M825K probably benign Het
Gjb2 T C 14: 57,337,678 (GRCm39) T177A probably benign Het
Gm6576 A G 15: 27,025,970 (GRCm39) noncoding transcript Het
Herpud2 A G 9: 25,025,207 (GRCm39) V175A probably benign Het
Hmgxb3 T C 18: 61,267,078 (GRCm39) D1052G probably damaging Het
Itpr1 T A 6: 108,358,169 (GRCm39) F578L probably benign Het
Kdm7a T G 6: 39,135,243 (GRCm39) probably benign Het
Krt76 A T 15: 101,793,323 (GRCm39) S572T unknown Het
Lrrcc1 T C 3: 14,601,601 (GRCm39) probably null Het
Marchf9 A C 10: 126,893,459 (GRCm39) V183G probably damaging Het
Mrtfb T C 16: 13,219,088 (GRCm39) V578A probably damaging Het
Ndufaf6 A T 4: 11,070,251 (GRCm39) D123E probably benign Het
Nhlh2 T G 3: 101,920,342 (GRCm39) Y125D probably damaging Het
Nol4l A G 2: 153,278,271 (GRCm39) probably benign Het
Npas1 C T 7: 16,197,247 (GRCm39) G206D probably benign Het
Or52h9 T C 7: 104,202,896 (GRCm39) F257L probably damaging Het
Or5ak24 C A 2: 85,260,639 (GRCm39) C178F possibly damaging Het
Pcdhb4 T A 18: 37,442,676 (GRCm39) V662E probably damaging Het
Plxna3 G A X: 73,379,400 (GRCm39) G758S probably damaging Het
Prdm15 T A 16: 97,607,717 (GRCm39) N709Y probably damaging Het
Pygo2 C T 3: 89,339,753 (GRCm39) probably benign Het
Ranbp2 T A 10: 58,312,120 (GRCm39) S947T probably damaging Het
Rasgrp1 T A 2: 117,129,010 (GRCm39) H203L probably damaging Het
Rbbp6 G A 7: 122,587,841 (GRCm39) G270R probably damaging Het
Rpl23a-ps1 T C 1: 46,020,793 (GRCm39) noncoding transcript Het
Serpinb7 T G 1: 107,363,110 (GRCm39) H91Q probably damaging Het
Shd C T 17: 56,279,839 (GRCm39) P111S possibly damaging Het
Slc35e1 G T 8: 73,237,602 (GRCm39) probably benign Het
Srgap3 C T 6: 112,752,647 (GRCm39) R279H probably damaging Het
Sstr4 G A 2: 148,237,472 (GRCm39) E28K probably benign Het
Stip1 T C 19: 6,998,464 (GRCm39) probably benign Het
Syne2 A G 12: 75,973,288 (GRCm39) E1097G probably benign Het
Tbcd T A 11: 121,431,819 (GRCm39) V489E probably damaging Het
Tnks2 T A 19: 36,849,033 (GRCm39) S516R probably benign Het
Trmt44 T A 5: 35,726,147 (GRCm39) R343S possibly damaging Het
Trps1 A G 15: 50,710,210 (GRCm39) S47P probably benign Het
Ubr3 A C 2: 69,747,441 (GRCm39) K235Q possibly damaging Het
Uckl1 G A 2: 181,216,754 (GRCm39) Q48* probably null Het
Vat1 T C 11: 101,356,541 (GRCm39) D140G probably benign Het
Vmn2r80 A G 10: 79,030,081 (GRCm39) T636A possibly damaging Het
Zfp423 A T 8: 88,508,239 (GRCm39) probably null Het
Zfp667 C A 7: 6,293,545 (GRCm39) T15N probably damaging Het
Other mutations in Rcl1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01514:Rcl1 APN 19 29,120,698 (GRCm39) utr 3 prime probably benign
IGL02625:Rcl1 APN 19 29,095,741 (GRCm39) missense probably benign 0.04
R0512:Rcl1 UTSW 19 29,105,497 (GRCm39) missense probably damaging 1.00
R2249:Rcl1 UTSW 19 29,099,268 (GRCm39) missense possibly damaging 0.46
R3610:Rcl1 UTSW 19 29,095,630 (GRCm39) missense probably benign 0.00
R4415:Rcl1 UTSW 19 29,095,762 (GRCm39) missense probably benign 0.01
R5324:Rcl1 UTSW 19 29,105,401 (GRCm39) missense probably benign 0.23
R5679:Rcl1 UTSW 19 29,098,658 (GRCm39) splice site probably null
R5988:Rcl1 UTSW 19 29,099,167 (GRCm39) missense probably damaging 1.00
R7332:Rcl1 UTSW 19 29,108,096 (GRCm39) missense probably benign 0.03
R7936:Rcl1 UTSW 19 29,095,805 (GRCm39) splice site probably null
R8353:Rcl1 UTSW 19 29,093,159 (GRCm39) missense possibly damaging 0.95
R8453:Rcl1 UTSW 19 29,093,159 (GRCm39) missense possibly damaging 0.95
R9282:Rcl1 UTSW 19 29,093,170 (GRCm39) missense probably damaging 0.99
R9747:Rcl1 UTSW 19 29,105,482 (GRCm39) missense probably damaging 0.98
Z1176:Rcl1 UTSW 19 29,079,017 (GRCm39) missense probably benign
Posted On 2013-10-07