Incidental Mutation 'IGL01331:Clec4g'
ID |
74529 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Clec4g
|
Ensembl Gene |
ENSMUSG00000074491 |
Gene Name |
C-type lectin domain family 4, member g |
Synonyms |
4930572L20Rik |
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL01331
|
Quality Score |
|
Status
|
|
Chromosome |
8 |
Chromosomal Location |
3757064-3770651 bp(-) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
T to C
at 3767190 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000058040]
[ENSMUST00000062037]
|
AlphaFold |
Q8BNX1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000058040
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000062037
|
SMART Domains |
Protein: ENSMUSP00000059574 Gene: ENSMUSG00000074491
Domain | Start | End | E-Value | Type |
transmembrane domain
|
31 |
53 |
N/A |
INTRINSIC |
coiled coil region
|
98 |
153 |
N/A |
INTRINSIC |
CLECT
|
165 |
288 |
8.85e-35 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000159612
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000160490
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000160527
|
SMART Domains |
Protein: ENSMUSP00000124493 Gene: ENSMUSG00000074491
Domain | Start | End | E-Value | Type |
CLECT
|
2 |
97 |
7.75e-8 |
SMART |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a glycan-binding receptor and member of the C-type lectin family which plays a role in the T-cell immune response. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased intrahepatic T cell immunity, enhanced immune-mediated liver injury during Con A-induced experimental acute hepatitis, and accelerated CTL-dependent adenovirus clearance. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 35 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Clca3a1 |
G |
A |
3: 144,453,273 (GRCm39) |
T517M |
probably damaging |
Het |
Cmya5 |
C |
T |
13: 93,233,454 (GRCm39) |
E545K |
possibly damaging |
Het |
Cntn6 |
A |
T |
6: 104,751,484 (GRCm39) |
D380V |
probably damaging |
Het |
Col9a2 |
C |
T |
4: 120,902,389 (GRCm39) |
P209S |
possibly damaging |
Het |
Cyp2b9 |
T |
C |
7: 25,887,140 (GRCm39) |
V183A |
probably damaging |
Het |
Dpt |
T |
C |
1: 164,624,379 (GRCm39) |
Y27H |
unknown |
Het |
Dusp16 |
T |
C |
6: 134,695,067 (GRCm39) |
Q588R |
possibly damaging |
Het |
Emg1 |
A |
G |
6: 124,682,033 (GRCm39) |
S164P |
probably benign |
Het |
Foxk1 |
G |
A |
5: 142,439,344 (GRCm39) |
R428Q |
probably damaging |
Het |
Frmd4a |
T |
A |
2: 4,607,036 (GRCm39) |
M667K |
probably benign |
Het |
Gpr55 |
T |
A |
1: 85,868,915 (GRCm39) |
|
probably benign |
Het |
Gtpbp8 |
A |
G |
16: 44,560,494 (GRCm39) |
I162T |
probably benign |
Het |
Ighv1-59 |
C |
T |
12: 115,298,992 (GRCm39) |
V21I |
possibly damaging |
Het |
Ipo11 |
T |
A |
13: 106,932,254 (GRCm39) |
Y938F |
possibly damaging |
Het |
Map4 |
G |
T |
9: 109,863,869 (GRCm39) |
V365L |
probably benign |
Het |
Mboat1 |
C |
A |
13: 30,403,684 (GRCm39) |
|
probably benign |
Het |
Med12 |
A |
G |
X: 100,324,360 (GRCm39) |
E649G |
possibly damaging |
Het |
Nfkbie |
T |
C |
17: 45,869,495 (GRCm39) |
V150A |
probably benign |
Het |
Or51ai2 |
A |
G |
7: 103,586,782 (GRCm39) |
Y65C |
possibly damaging |
Het |
Or8k22 |
A |
C |
2: 86,163,048 (GRCm39) |
Y217* |
probably null |
Het |
Prdm1 |
T |
A |
10: 44,317,970 (GRCm39) |
K299N |
possibly damaging |
Het |
Ribc1 |
T |
C |
X: 150,788,102 (GRCm39) |
T291A |
probably benign |
Het |
Rps6kc1 |
G |
T |
1: 190,532,549 (GRCm39) |
N484K |
possibly damaging |
Het |
Serpina3k |
C |
A |
12: 104,309,369 (GRCm39) |
A271D |
probably benign |
Het |
Spata18 |
G |
T |
5: 73,827,024 (GRCm39) |
R321L |
probably damaging |
Het |
Styxl2 |
C |
A |
1: 165,935,749 (GRCm39) |
V150L |
probably damaging |
Het |
Syne2 |
C |
A |
12: 75,976,027 (GRCm39) |
|
probably benign |
Het |
Syt17 |
T |
A |
7: 118,007,389 (GRCm39) |
I302F |
probably damaging |
Het |
Tgm6 |
A |
G |
2: 129,985,538 (GRCm39) |
|
probably null |
Het |
Tmc2 |
A |
G |
2: 130,074,276 (GRCm39) |
Y323C |
probably damaging |
Het |
Tnc |
T |
C |
4: 63,901,112 (GRCm39) |
D1452G |
probably damaging |
Het |
Ttn |
A |
G |
2: 76,620,022 (GRCm39) |
I7555T |
probably damaging |
Het |
Ugt2b36 |
A |
T |
5: 87,238,801 (GRCm39) |
W131R |
probably damaging |
Het |
Vmn2r75 |
A |
T |
7: 85,820,870 (GRCm39) |
C21* |
probably null |
Het |
Zfp592 |
T |
A |
7: 80,691,296 (GRCm39) |
C1158* |
probably null |
Het |
|
Other mutations in Clec4g |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00566:Clec4g
|
APN |
8 |
3,766,410 (GRCm39) |
intron |
probably benign |
|
IGL01090:Clec4g
|
APN |
8 |
3,769,482 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01593:Clec4g
|
APN |
8 |
3,769,474 (GRCm39) |
critical splice donor site |
probably null |
|
IGL02942:Clec4g
|
APN |
8 |
3,768,356 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL03176:Clec4g
|
APN |
8 |
3,768,441 (GRCm39) |
missense |
possibly damaging |
0.90 |
bluedog
|
UTSW |
8 |
3,768,766 (GRCm39) |
critical splice donor site |
probably null |
|
R0071:Clec4g
|
UTSW |
8 |
3,767,489 (GRCm39) |
start gained |
probably benign |
|
R0379:Clec4g
|
UTSW |
8 |
3,768,440 (GRCm39) |
missense |
probably benign |
0.00 |
R4571:Clec4g
|
UTSW |
8 |
3,768,766 (GRCm39) |
critical splice donor site |
probably null |
|
R4854:Clec4g
|
UTSW |
8 |
3,766,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R4856:Clec4g
|
UTSW |
8 |
3,766,419 (GRCm39) |
intron |
probably benign |
|
R4886:Clec4g
|
UTSW |
8 |
3,766,419 (GRCm39) |
intron |
probably benign |
|
R5370:Clec4g
|
UTSW |
8 |
3,768,344 (GRCm39) |
missense |
probably benign |
0.13 |
R5390:Clec4g
|
UTSW |
8 |
3,768,441 (GRCm39) |
missense |
probably benign |
0.02 |
R6522:Clec4g
|
UTSW |
8 |
3,768,803 (GRCm39) |
missense |
probably benign |
0.11 |
R6737:Clec4g
|
UTSW |
8 |
3,757,716 (GRCm39) |
utr 3 prime |
probably benign |
|
R7097:Clec4g
|
UTSW |
8 |
3,769,518 (GRCm39) |
missense |
possibly damaging |
0.58 |
R7834:Clec4g
|
UTSW |
8 |
3,766,500 (GRCm39) |
missense |
probably damaging |
1.00 |
R8372:Clec4g
|
UTSW |
8 |
3,757,990 (GRCm39) |
utr 3 prime |
probably benign |
|
R9297:Clec4g
|
UTSW |
8 |
3,766,500 (GRCm39) |
missense |
probably damaging |
1.00 |
R9312:Clec4g
|
UTSW |
8 |
3,768,371 (GRCm39) |
missense |
probably null |
1.00 |
R9318:Clec4g
|
UTSW |
8 |
3,766,500 (GRCm39) |
missense |
probably damaging |
1.00 |
R9517:Clec4g
|
UTSW |
8 |
3,767,452 (GRCm39) |
missense |
probably damaging |
0.98 |
R9526:Clec4g
|
UTSW |
8 |
3,768,565 (GRCm39) |
missense |
probably benign |
0.33 |
R9682:Clec4g
|
UTSW |
8 |
3,757,713 (GRCm39) |
missense |
unknown |
|
Z1088:Clec4g
|
UTSW |
8 |
3,766,548 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1088:Clec4g
|
UTSW |
8 |
3,757,796 (GRCm39) |
utr 3 prime |
probably benign |
|
|
Posted On |
2013-10-07 |