Incidental Mutation 'IGL01345:Slc22a15'
| ID |
75017 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Slc22a15
|
| Ensembl Gene |
ENSMUSG00000033147 |
| Gene Name |
solute carrier family 22 (organic anion/cation transporter), member 15 |
| Synonyms |
2610034P21Rik, A530052I06Rik |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.058)
|
| Stock # |
IGL01345
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
3 |
| Chromosomal Location |
101763092-101831769 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to C
at 101787492 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Arginine
at position 259
(S259R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000102541
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000106928]
[ENSMUST00000183255]
[ENSMUST00000190824]
|
| AlphaFold |
Q504N2 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000106928
AA Change: S259R
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000102541
Gene: ENSMUSG00000033147
AA Change: S259R
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
20 |
42 |
N/A |
INTRINSIC |
|
Pfam:Sugar_tr
|
58 |
495 |
6.9e-29 |
PFAM |
|
Pfam:MFS_1
|
69 |
450 |
3.4e-24 |
PFAM |
|
low complexity region
|
524 |
532 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000182130
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000183098
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000183255
|
| SMART Domains |
Protein: ENSMUSP00000138357
Gene: ENSMUSG00000033147
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
20 |
42 |
N/A |
INTRINSIC |
|
Pfam:Sugar_tr
|
56 |
244 |
5.2e-13 |
PFAM |
|
Pfam:MFS_1
|
69 |
244 |
7.6e-13 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000183293
|
| Predicted Effect |
unknown
Transcript: ENSMUST00000190824
AA Change: S104R
|
| SMART Domains |
Protein: ENSMUSP00000139518
Gene: ENSMUSG00000033147
AA Change: S104R
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
36 |
N/A |
INTRINSIC |
|
Pfam:Sugar_tr
|
88 |
341 |
3.3e-5 |
PFAM |
|
low complexity region
|
369 |
377 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Organic ion transporters, such as SLC22A15, transport various medically and physiologically important compounds, including pharmaceuticals, toxins, hormones, neurotransmitters, and cellular metabolites. These transporters are also referred to as amphiphilic solute facilitators (ASFs).[supplied by OMIM, Apr 2004]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 22 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930518I15Rik |
A |
G |
2: 156,699,020 (GRCm39) |
|
probably benign |
Het |
| Atr |
G |
A |
9: 95,823,002 (GRCm39) |
C2323Y |
probably damaging |
Het |
| Ccdc107 |
T |
A |
4: 43,493,453 (GRCm39) |
L8* |
probably null |
Het |
| Erc1 |
T |
A |
6: 119,738,224 (GRCm39) |
K240* |
probably null |
Het |
| Gcat |
T |
C |
15: 78,918,265 (GRCm39) |
|
probably benign |
Het |
| Gm4847 |
A |
T |
1: 166,462,541 (GRCm39) |
D316E |
probably damaging |
Het |
| Gm8267 |
A |
G |
14: 44,962,412 (GRCm39) |
S3P |
probably damaging |
Het |
| Gpr26 |
T |
C |
7: 131,569,161 (GRCm39) |
F169L |
possibly damaging |
Het |
| Itgal |
T |
A |
7: 126,900,128 (GRCm39) |
F129I |
possibly damaging |
Het |
| Kcnk1 |
T |
A |
8: 126,752,146 (GRCm39) |
C251S |
possibly damaging |
Het |
| Nfkb1 |
T |
C |
3: 135,300,742 (GRCm39) |
D608G |
probably damaging |
Het |
| Nlrp2 |
T |
C |
7: 5,320,491 (GRCm39) |
E882G |
probably benign |
Het |
| Odad2 |
T |
C |
18: 7,266,947 (GRCm39) |
K385E |
probably benign |
Het |
| Pik3r5 |
G |
A |
11: 68,387,020 (GRCm39) |
D854N |
possibly damaging |
Het |
| Rnf220 |
G |
A |
4: 117,130,467 (GRCm39) |
R253* |
probably null |
Het |
| Tln1 |
G |
A |
4: 43,536,281 (GRCm39) |
L2004F |
probably damaging |
Het |
| Tlnrd1 |
A |
G |
7: 83,532,054 (GRCm39) |
S126P |
probably damaging |
Het |
| Ulk4 |
T |
C |
9: 121,037,228 (GRCm39) |
T587A |
possibly damaging |
Het |
| Vasn |
A |
G |
16: 4,466,232 (GRCm39) |
I60V |
probably benign |
Het |
| Vps33a |
G |
T |
5: 123,711,006 (GRCm39) |
N13K |
probably benign |
Het |
| Zmiz2 |
A |
G |
11: 6,355,015 (GRCm39) |
D862G |
possibly damaging |
Het |
| Zswim3 |
T |
A |
2: 164,662,057 (GRCm39) |
L179H |
probably damaging |
Het |
|
| Other mutations in Slc22a15 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00846:Slc22a15
|
APN |
3 |
101,768,136 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01120:Slc22a15
|
APN |
3 |
101,804,482 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01871:Slc22a15
|
APN |
3 |
101,768,110 (GRCm39) |
splice site |
probably benign |
|
|
IGL01880:Slc22a15
|
APN |
3 |
101,768,164 (GRCm39) |
missense |
probably benign |
0.32 |
|
R0310:Slc22a15
|
UTSW |
3 |
101,767,827 (GRCm39) |
missense |
probably benign |
0.12 |
|
R1758:Slc22a15
|
UTSW |
3 |
101,767,769 (GRCm39) |
nonsense |
probably null |
|
|
R1937:Slc22a15
|
UTSW |
3 |
101,787,505 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R3804:Slc22a15
|
UTSW |
3 |
101,804,590 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4830:Slc22a15
|
UTSW |
3 |
101,782,919 (GRCm39) |
intron |
probably benign |
|
|
R5564:Slc22a15
|
UTSW |
3 |
101,771,905 (GRCm39) |
missense |
probably benign |
0.34 |
|
R5684:Slc22a15
|
UTSW |
3 |
101,770,271 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6034:Slc22a15
|
UTSW |
3 |
101,770,235 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R6034:Slc22a15
|
UTSW |
3 |
101,770,235 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R6114:Slc22a15
|
UTSW |
3 |
101,768,168 (GRCm39) |
nonsense |
probably null |
|
|
R6481:Slc22a15
|
UTSW |
3 |
101,790,899 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R6641:Slc22a15
|
UTSW |
3 |
101,783,022 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R6945:Slc22a15
|
UTSW |
3 |
101,831,430 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7354:Slc22a15
|
UTSW |
3 |
101,771,897 (GRCm39) |
missense |
probably benign |
0.09 |
|
R7373:Slc22a15
|
UTSW |
3 |
101,785,213 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R7431:Slc22a15
|
UTSW |
3 |
101,805,256 (GRCm39) |
missense |
probably benign |
0.13 |
|
R7758:Slc22a15
|
UTSW |
3 |
101,805,251 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8058:Slc22a15
|
UTSW |
3 |
101,771,926 (GRCm39) |
missense |
probably benign |
|
|
R8129:Slc22a15
|
UTSW |
3 |
101,822,658 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R8838:Slc22a15
|
UTSW |
3 |
101,790,849 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9652:Slc22a15
|
UTSW |
3 |
101,790,848 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
| Posted On |
2013-10-07 |
Incidental Mutation