Incidental Mutation 'IGL01300:Vmn1r237'
| ID |
75226 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn1r237
|
| Ensembl Gene |
ENSMUSG00000058030 |
| Gene Name |
vomeronasal 1 receptor 237 |
| Synonyms |
V1rf3 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.055)
|
| Stock # |
IGL01300
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
17 |
| Chromosomal Location |
21534279-21535148 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 21534337 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Asparagine
at position 20
(I20N)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000076531
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000077301]
|
| AlphaFold |
Q8R296 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000077301
AA Change: I20N
PolyPhen 2
Score 0.972 (Sensitivity: 0.77; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000076531
Gene: ENSMUSG00000058030
AA Change: I20N
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:TAS2R
|
1 |
289 |
7.1e-17 |
PFAM |
|
Pfam:V1R
|
34 |
289 |
1.9e-34 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Anxa8 |
A |
G |
14: 33,821,700 (GRCm39) |
D300G |
probably benign |
Het |
| Cacna1g |
T |
C |
11: 94,324,738 (GRCm39) |
H1161R |
probably benign |
Het |
| Col14a1 |
G |
A |
15: 55,331,372 (GRCm39) |
R1471Q |
unknown |
Het |
| Gm14496 |
A |
T |
2: 181,642,753 (GRCm39) |
E808V |
probably damaging |
Het |
| Gm1968 |
T |
C |
16: 29,781,038 (GRCm39) |
|
noncoding transcript |
Het |
| Gzmb |
G |
A |
14: 56,497,653 (GRCm39) |
R196C |
probably benign |
Het |
| Hkdc1 |
A |
G |
10: 62,231,040 (GRCm39) |
|
probably benign |
Het |
| Itgal |
T |
A |
7: 126,913,290 (GRCm39) |
V629E |
probably damaging |
Het |
| Jak2 |
T |
A |
19: 29,287,083 (GRCm39) |
Y1050N |
probably damaging |
Het |
| Lrrc69 |
C |
T |
4: 14,773,663 (GRCm39) |
|
probably benign |
Het |
| Mmd |
T |
C |
11: 90,140,537 (GRCm39) |
M1T |
probably null |
Het |
| Myh6 |
A |
G |
14: 55,200,548 (GRCm39) |
V191A |
possibly damaging |
Het |
| Mynn |
A |
G |
3: 30,667,755 (GRCm39) |
N485S |
probably damaging |
Het |
| Naa30 |
C |
T |
14: 49,410,714 (GRCm39) |
T214M |
probably damaging |
Het |
| Ncoa3 |
A |
T |
2: 165,910,381 (GRCm39) |
T1265S |
probably benign |
Het |
| Or10al2 |
C |
A |
17: 37,983,778 (GRCm39) |
T288K |
probably damaging |
Het |
| Or1j10 |
T |
C |
2: 36,267,054 (GRCm39) |
S89P |
probably benign |
Het |
| Prex1 |
A |
G |
2: 166,480,327 (GRCm39) |
C138R |
possibly damaging |
Het |
| Prom2 |
A |
T |
2: 127,377,009 (GRCm39) |
L535H |
probably benign |
Het |
| Pros1 |
T |
C |
16: 62,734,174 (GRCm39) |
F327L |
possibly damaging |
Het |
| Ros1 |
A |
G |
10: 51,977,809 (GRCm39) |
M1479T |
probably benign |
Het |
| Scn9a |
G |
A |
2: 66,318,397 (GRCm39) |
Q1465* |
probably null |
Het |
| Serpinb3b |
A |
G |
1: 107,083,573 (GRCm39) |
|
probably benign |
Het |
| Sipa1l3 |
G |
A |
7: 29,099,253 (GRCm39) |
Q339* |
probably null |
Het |
| Slc34a2 |
A |
C |
5: 53,225,469 (GRCm39) |
|
probably null |
Het |
| Smc3 |
T |
A |
19: 53,630,283 (GRCm39) |
|
probably benign |
Het |
| Tmem30a |
A |
G |
9: 79,682,382 (GRCm39) |
|
probably null |
Het |
| Trappc11 |
A |
T |
8: 47,954,903 (GRCm39) |
D878E |
probably benign |
Het |
| Trrap |
C |
T |
5: 144,741,628 (GRCm39) |
T1325M |
probably damaging |
Het |
| Ttc12 |
A |
T |
9: 49,359,222 (GRCm39) |
|
probably benign |
Het |
| Vmn2r115 |
T |
A |
17: 23,578,755 (GRCm39) |
S743T |
probably damaging |
Het |
| Vmn2r74 |
A |
G |
7: 85,606,414 (GRCm39) |
Y311H |
probably benign |
Het |
| Vnn3 |
T |
A |
10: 23,740,263 (GRCm39) |
F189I |
possibly damaging |
Het |
|
| Other mutations in Vmn1r237 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02746:Vmn1r237
|
APN |
17 |
21,534,480 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
IGL03112:Vmn1r237
|
APN |
17 |
21,534,368 (GRCm39) |
nonsense |
probably null |
|
|
IGL03351:Vmn1r237
|
APN |
17 |
21,535,099 (GRCm39) |
missense |
probably benign |
0.06 |
|
BB009:Vmn1r237
|
UTSW |
17 |
21,534,725 (GRCm39) |
missense |
probably benign |
0.01 |
|
BB019:Vmn1r237
|
UTSW |
17 |
21,534,725 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0478:Vmn1r237
|
UTSW |
17 |
21,535,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0514:Vmn1r237
|
UTSW |
17 |
21,534,932 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R0616:Vmn1r237
|
UTSW |
17 |
21,534,885 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0865:Vmn1r237
|
UTSW |
17 |
21,534,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1590:Vmn1r237
|
UTSW |
17 |
21,534,301 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3022:Vmn1r237
|
UTSW |
17 |
21,534,709 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4241:Vmn1r237
|
UTSW |
17 |
21,534,925 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R4242:Vmn1r237
|
UTSW |
17 |
21,534,925 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R4646:Vmn1r237
|
UTSW |
17 |
21,534,400 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5144:Vmn1r237
|
UTSW |
17 |
21,534,688 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R5229:Vmn1r237
|
UTSW |
17 |
21,534,633 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5334:Vmn1r237
|
UTSW |
17 |
21,534,942 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5800:Vmn1r237
|
UTSW |
17 |
21,535,069 (GRCm39) |
missense |
probably benign |
0.05 |
|
R5898:Vmn1r237
|
UTSW |
17 |
21,534,813 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6190:Vmn1r237
|
UTSW |
17 |
21,534,556 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6472:Vmn1r237
|
UTSW |
17 |
21,534,616 (GRCm39) |
missense |
probably benign |
0.16 |
|
R6811:Vmn1r237
|
UTSW |
17 |
21,534,648 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7932:Vmn1r237
|
UTSW |
17 |
21,534,725 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8008:Vmn1r237
|
UTSW |
17 |
21,534,456 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8086:Vmn1r237
|
UTSW |
17 |
21,534,509 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R9568:Vmn1r237
|
UTSW |
17 |
21,534,777 (GRCm39) |
missense |
probably benign |
|
|
R9631:Vmn1r237
|
UTSW |
17 |
21,534,660 (GRCm39) |
missense |
probably benign |
0.28 |
|
X0011:Vmn1r237
|
UTSW |
17 |
21,534,317 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
| Posted On |
2013-10-07 |
Incidental Mutation