Incidental Mutation 'IGL01357:B3gat1'
ID |
75566 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
B3gat1
|
Ensembl Gene |
ENSMUSG00000045994 |
Gene Name |
beta-1,3-glucuronyltransferase 1 |
Synonyms |
0710007K08Rik, GlcAT-P |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.157)
|
Stock # |
IGL01357
|
Quality Score |
|
Status
|
|
Chromosome |
9 |
Chromosomal Location |
26644813-26672646 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 26668283 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Proline
at position 291
(L291P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000124752
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000115269]
[ENSMUST00000159799]
[ENSMUST00000160899]
[ENSMUST00000161115]
[ENSMUST00000161431]
|
AlphaFold |
Q9CW73 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000115269
AA Change: L304P
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000110924 Gene: ENSMUSG00000045994 AA Change: L304P
Domain | Start | End | E-Value | Type |
transmembrane domain
|
20 |
37 |
N/A |
INTRINSIC |
Pfam:Glyco_transf_43
|
118 |
329 |
6.6e-85 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000159527
|
SMART Domains |
Protein: ENSMUSP00000125401 Gene: ENSMUSG00000045994
Domain | Start | End | E-Value | Type |
Pfam:Glyco_transf_43
|
48 |
259 |
2.1e-85 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000159799
AA Change: L304P
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000124438 Gene: ENSMUSG00000045994 AA Change: L304P
Domain | Start | End | E-Value | Type |
transmembrane domain
|
20 |
37 |
N/A |
INTRINSIC |
Pfam:Glyco_transf_43
|
118 |
329 |
6.6e-85 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000160899
AA Change: L304P
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000124067 Gene: ENSMUSG00000045994 AA Change: L304P
Domain | Start | End | E-Value | Type |
transmembrane domain
|
20 |
37 |
N/A |
INTRINSIC |
Pfam:Glyco_transf_43
|
118 |
328 |
1.7e-77 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000161115
AA Change: L291P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000125700 Gene: ENSMUSG00000045994 AA Change: L291P
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
24 |
N/A |
INTRINSIC |
Pfam:Glyco_transf_43
|
105 |
316 |
3.7e-85 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000161431
AA Change: L291P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000124752 Gene: ENSMUSG00000045994 AA Change: L291P
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
24 |
N/A |
INTRINSIC |
Pfam:Glyco_transf_43
|
105 |
202 |
1.9e-34 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the glucuronyltransferase gene family. These enzymes exhibit strict acceptor specificity, recognizing nonreducing terminal sugars and their anomeric linkages. This gene product functions as the key enzyme in a glucuronyl transfer reaction during the biosynthesis of the carbohydrate epitope HNK-1 (human natural killer-1, also known as CD57 and LEU7). Alternate transcriptional splice variants have been characterized. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a null allele exhibit reduced long term potentiation and impaired spatial learning. [provided by MGI curators]
|
Allele List at MGI |
All alleles(1) : Targeted, knock-out(1) |
Other mutations in this stock |
Total: 42 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2310022B05Rik |
C |
A |
8: 125,366,072 (GRCm39) |
V224F |
probably damaging |
Het |
Abca4 |
T |
A |
3: 121,897,232 (GRCm39) |
M637K |
probably damaging |
Het |
Abca8a |
A |
G |
11: 109,922,398 (GRCm39) |
V1395A |
probably benign |
Het |
Adam20 |
A |
C |
8: 41,249,597 (GRCm39) |
D569A |
probably benign |
Het |
Axl |
A |
G |
7: 25,473,594 (GRCm39) |
L344P |
probably benign |
Het |
Cdc25c |
A |
T |
18: 34,867,910 (GRCm39) |
|
probably null |
Het |
Crat |
A |
T |
2: 30,297,736 (GRCm39) |
Y263N |
probably damaging |
Het |
Crb2 |
A |
G |
2: 37,685,523 (GRCm39) |
|
probably benign |
Het |
Dhx33 |
G |
A |
11: 70,884,687 (GRCm39) |
Q40* |
probably null |
Het |
Dnah7a |
A |
T |
1: 53,701,540 (GRCm39) |
V205D |
probably benign |
Het |
Emsy |
A |
T |
7: 98,240,077 (GRCm39) |
Y1011* |
probably null |
Het |
Fbln5 |
C |
T |
12: 101,717,146 (GRCm39) |
S414N |
probably damaging |
Het |
Fev |
T |
C |
1: 74,921,683 (GRCm39) |
E89G |
possibly damaging |
Het |
Fgg |
A |
G |
3: 82,921,535 (GRCm39) |
E406G |
possibly damaging |
Het |
Glra1 |
A |
T |
11: 55,405,715 (GRCm39) |
M425K |
possibly damaging |
Het |
Gm8214 |
C |
T |
1: 183,414,129 (GRCm39) |
|
noncoding transcript |
Het |
Kdm3b |
A |
G |
18: 34,926,067 (GRCm39) |
E69G |
probably damaging |
Het |
Kntc1 |
T |
A |
5: 123,895,877 (GRCm39) |
V89E |
probably damaging |
Het |
L3mbtl3 |
T |
A |
10: 26,206,083 (GRCm39) |
N361I |
unknown |
Het |
Macrod2 |
A |
G |
2: 142,226,250 (GRCm39) |
N457S |
probably damaging |
Het |
Mal |
C |
A |
2: 127,482,234 (GRCm39) |
M56I |
probably damaging |
Het |
Mfsd5 |
C |
T |
15: 102,189,882 (GRCm39) |
T418M |
probably benign |
Het |
Mmaa |
C |
A |
8: 79,994,600 (GRCm39) |
R402L |
probably benign |
Het |
Myo15a |
T |
C |
11: 60,393,115 (GRCm39) |
|
probably benign |
Het |
Nme1 |
A |
G |
11: 93,850,317 (GRCm39) |
S122P |
possibly damaging |
Het |
Nxt1 |
A |
G |
2: 148,517,316 (GRCm39) |
E19G |
probably damaging |
Het |
Nynrin |
A |
T |
14: 56,107,874 (GRCm39) |
T994S |
probably benign |
Het |
Orc2 |
T |
G |
1: 58,536,551 (GRCm39) |
E56D |
probably benign |
Het |
Orc2 |
T |
C |
1: 58,536,552 (GRCm39) |
E56G |
probably benign |
Het |
Pid1 |
G |
A |
1: 84,016,026 (GRCm39) |
T113I |
probably damaging |
Het |
Plcg2 |
G |
A |
8: 118,340,900 (GRCm39) |
|
probably benign |
Het |
Rad50 |
A |
G |
11: 53,597,848 (GRCm39) |
V12A |
probably damaging |
Het |
Serpinb9c |
C |
T |
13: 33,335,862 (GRCm39) |
V197I |
probably benign |
Het |
Sfxn2 |
A |
T |
19: 46,574,212 (GRCm39) |
N134I |
probably damaging |
Het |
Spen |
T |
C |
4: 141,244,424 (GRCm39) |
R204G |
unknown |
Het |
Strip2 |
A |
G |
6: 29,939,166 (GRCm39) |
|
probably benign |
Het |
Tas2r135 |
A |
T |
6: 42,383,078 (GRCm39) |
I206L |
probably benign |
Het |
Tmem243 |
A |
G |
5: 9,151,348 (GRCm39) |
T11A |
probably damaging |
Het |
Tmprss11c |
A |
G |
5: 86,379,666 (GRCm39) |
V401A |
probably damaging |
Het |
Trim50 |
T |
A |
5: 135,392,808 (GRCm39) |
I241N |
probably damaging |
Het |
Ttn |
A |
C |
2: 76,781,864 (GRCm39) |
S1015A |
possibly damaging |
Het |
Wee1 |
T |
C |
7: 109,741,242 (GRCm39) |
S622P |
probably benign |
Het |
|
Other mutations in B3gat1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01323:B3gat1
|
APN |
9 |
26,667,206 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02140:B3gat1
|
APN |
9 |
26,669,043 (GRCm39) |
missense |
possibly damaging |
0.63 |
R0098:B3gat1
|
UTSW |
9 |
26,668,237 (GRCm39) |
missense |
probably damaging |
1.00 |
R0098:B3gat1
|
UTSW |
9 |
26,668,237 (GRCm39) |
missense |
probably damaging |
1.00 |
R0234:B3gat1
|
UTSW |
9 |
26,667,377 (GRCm39) |
missense |
probably damaging |
0.99 |
R0234:B3gat1
|
UTSW |
9 |
26,667,377 (GRCm39) |
missense |
probably damaging |
0.99 |
R0944:B3gat1
|
UTSW |
9 |
26,668,237 (GRCm39) |
missense |
probably damaging |
1.00 |
R1608:B3gat1
|
UTSW |
9 |
26,663,112 (GRCm39) |
missense |
probably damaging |
1.00 |
R1957:B3gat1
|
UTSW |
9 |
26,667,248 (GRCm39) |
missense |
possibly damaging |
0.86 |
R3401:B3gat1
|
UTSW |
9 |
26,667,149 (GRCm39) |
missense |
probably damaging |
1.00 |
R3956:B3gat1
|
UTSW |
9 |
26,668,324 (GRCm39) |
missense |
possibly damaging |
0.49 |
R4669:B3gat1
|
UTSW |
9 |
26,663,052 (GRCm39) |
missense |
probably benign |
0.37 |
R4803:B3gat1
|
UTSW |
9 |
26,666,986 (GRCm39) |
missense |
probably benign |
0.01 |
R4942:B3gat1
|
UTSW |
9 |
26,666,894 (GRCm39) |
missense |
probably benign |
0.00 |
R6818:B3gat1
|
UTSW |
9 |
26,662,998 (GRCm39) |
start gained |
probably benign |
|
R7912:B3gat1
|
UTSW |
9 |
26,666,882 (GRCm39) |
missense |
probably benign |
0.00 |
R8217:B3gat1
|
UTSW |
9 |
26,668,165 (GRCm39) |
missense |
probably damaging |
1.00 |
R9023:B3gat1
|
UTSW |
9 |
26,663,069 (GRCm39) |
start gained |
probably benign |
|
|
Posted On |
2013-10-07 |