Incidental Mutation 'R0828:Slco1a1'
ID 78380
Institutional Source Beutler Lab
Gene Symbol Slco1a1
Ensembl Gene ENSMUSG00000041698
Gene Name solute carrier organic anion transporter family, member 1a1
Synonyms Slc21a1, Oatp1a1, Oatp1
MMRRC Submission 039008-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.270) question?
Stock # R0828 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 141853008-141892688 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 141867565 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Valine at position 456 (D456V)
Ref Sequence ENSEMBL: ENSMUSP00000132386 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000042119] [ENSMUST00000168119]
AlphaFold Q9QXZ6
Predicted Effect possibly damaging
Transcript: ENSMUST00000042119
AA Change: D456V

PolyPhen 2 Score 0.889 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000037022
Gene: ENSMUSG00000041698
AA Change: D456V

DomainStartEndE-ValueType
Pfam:OATP 21 597 6e-168 PFAM
Pfam:MFS_1 22 410 4.7e-28 PFAM
Pfam:Kazal_2 445 486 1.2e-10 PFAM
transmembrane domain 600 622 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000168119
AA Change: D456V

PolyPhen 2 Score 0.889 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000132386
Gene: ENSMUSG00000041698
AA Change: D456V

DomainStartEndE-ValueType
Pfam:OATP 21 597 1.6e-168 PFAM
Pfam:MFS_1 22 410 1e-27 PFAM
Pfam:Kazal_2 445 486 4.6e-11 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000171651
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.7%
  • 10x: 97.1%
  • 20x: 93.8%
Validation Efficiency 98% (59/60)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired organic anion transporter activity and urinary metabolomic profiles. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 59 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5730522E02Rik C T 11: 25,602,020 (GRCm39) C70Y unknown Het
Abi3bp C T 16: 56,498,193 (GRCm39) T929I probably damaging Het
Adap2 C A 11: 80,056,490 (GRCm39) probably benign Het
Adgrg5 A G 8: 95,668,413 (GRCm39) probably null Het
Afdn C A 17: 14,124,260 (GRCm39) N1803K probably damaging Het
Alox12b T C 11: 69,057,132 (GRCm39) L451P possibly damaging Het
Ankrd26 T C 6: 118,510,434 (GRCm39) probably benign Het
Bcr A T 10: 74,993,039 (GRCm39) probably benign Het
Cacna1c T C 6: 118,734,347 (GRCm39) N300D probably benign Het
Camsap1 G T 2: 25,829,097 (GRCm39) Q876K probably damaging Het
Cdh10 A G 15: 18,986,837 (GRCm39) D356G possibly damaging Het
Cdipt T A 7: 126,576,092 (GRCm39) Y16N probably damaging Het
Cebpz T C 17: 79,233,411 (GRCm39) E772G probably benign Het
Cep350 A G 1: 155,828,992 (GRCm39) I304T probably benign Het
Chpt1 C A 10: 88,312,277 (GRCm39) G9V probably damaging Het
Col6a5 T A 9: 105,739,263 (GRCm39) probably null Het
Dock7 G T 4: 98,903,982 (GRCm39) P688T probably damaging Het
Ephb3 T A 16: 21,037,784 (GRCm39) probably benign Het
Fcgr2b T C 1: 170,788,599 (GRCm39) Y336C probably damaging Het
Flg2 A T 3: 93,110,639 (GRCm39) H889L unknown Het
Gucy2c C T 6: 136,686,746 (GRCm39) V806M probably damaging Het
Hmgxb3 T A 18: 61,304,426 (GRCm39) I55F probably damaging Het
Igsf9b T A 9: 27,230,901 (GRCm39) Y301* probably null Het
Il12rb2 C T 6: 67,333,691 (GRCm39) R196H probably benign Het
Itgam T C 7: 127,715,677 (GRCm39) probably null Het
Klhl25 T C 7: 75,515,943 (GRCm39) V283A probably damaging Het
Klhl5 T C 5: 65,320,135 (GRCm39) L423P probably damaging Het
Krt6a T C 15: 101,602,271 (GRCm39) N138S probably damaging Het
Lrba A T 3: 86,515,677 (GRCm39) probably null Het
Map4k5 T C 12: 69,852,100 (GRCm39) T828A probably damaging Het
Marchf8 T A 6: 116,382,639 (GRCm39) M434K probably benign Het
Mink1 C T 11: 70,500,971 (GRCm39) Q743* probably null Het
Mrgpra3 T C 7: 47,239,884 (GRCm39) N14S probably benign Het
Mroh7 T C 4: 106,557,073 (GRCm39) S808G probably damaging Het
Msi1 T C 5: 115,568,953 (GRCm39) probably null Het
Nrap A G 19: 56,333,990 (GRCm39) Y874H probably damaging Het
Nup205 T C 6: 35,171,501 (GRCm39) F455L probably benign Het
Or2t1 G T 14: 14,328,800 (GRCm38) V230L probably benign Het
Piwil2 A G 14: 70,613,466 (GRCm39) V894A probably damaging Het
Polr1c A G 17: 46,555,990 (GRCm39) S173P probably damaging Het
Pphln1-ps1 A G 16: 13,495,669 (GRCm39) Y256C probably damaging Het
Prep C T 10: 45,031,621 (GRCm39) A564V probably benign Het
Rab3gap1 T C 1: 127,865,922 (GRCm39) probably benign Het
Rcc1 G C 4: 132,063,136 (GRCm39) probably benign Het
Scn11a T A 9: 119,584,073 (GRCm39) D1514V probably benign Het
Setdb1 G A 3: 95,246,171 (GRCm39) P584S probably damaging Het
Slc12a7 A G 13: 73,936,771 (GRCm39) I144V probably benign Het
Slc45a4 T C 15: 73,458,665 (GRCm39) M295V probably benign Het
Sspo G T 6: 48,475,668 (GRCm39) C4928F probably damaging Het
St6galnac1 T A 11: 116,659,823 (GRCm39) K163N probably benign Het
Tcp11l1 A T 2: 104,530,181 (GRCm39) probably benign Het
Tns1 T A 1: 73,958,825 (GRCm39) I1715F probably damaging Het
Trpa1 C T 1: 14,946,108 (GRCm39) V1008M probably damaging Het
Ttc28 A G 5: 111,371,312 (GRCm39) E587G probably damaging Het
Ubr4 T C 4: 139,177,864 (GRCm39) probably benign Het
Ugcg C T 4: 59,207,798 (GRCm39) P46S probably benign Het
Usp8 G A 2: 126,584,034 (GRCm39) probably benign Het
Zfc3h1 G T 10: 115,237,612 (GRCm39) A464S possibly damaging Het
Zfp106 T C 2: 120,366,084 (GRCm39) I108V probably benign Het
Other mutations in Slco1a1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00327:Slco1a1 APN 6 141,854,851 (GRCm39) missense probably damaging 0.98
IGL00942:Slco1a1 APN 6 141,892,354 (GRCm39) missense probably benign 0.00
IGL01301:Slco1a1 APN 6 141,878,256 (GRCm39) splice site probably benign
IGL01306:Slco1a1 APN 6 141,892,313 (GRCm39) nonsense probably null
IGL01774:Slco1a1 APN 6 141,871,339 (GRCm39) nonsense probably null
IGL02097:Slco1a1 APN 6 141,885,765 (GRCm39) missense possibly damaging 0.94
IGL02183:Slco1a1 APN 6 141,867,669 (GRCm39) splice site probably benign
IGL02376:Slco1a1 APN 6 141,870,060 (GRCm39) critical splice donor site probably null
IGL02550:Slco1a1 APN 6 141,889,191 (GRCm39) missense probably benign 0.24
IGL02559:Slco1a1 APN 6 141,867,514 (GRCm39) missense probably benign 0.01
IGL02825:Slco1a1 APN 6 141,864,343 (GRCm39) missense probably damaging 1.00
IGL03352:Slco1a1 APN 6 141,857,611 (GRCm39) missense probably benign 0.00
ANU23:Slco1a1 UTSW 6 141,892,313 (GRCm39) nonsense probably null
R0041:Slco1a1 UTSW 6 141,864,185 (GRCm39) splice site probably benign
R0153:Slco1a1 UTSW 6 141,856,427 (GRCm39) splice site probably benign
R0610:Slco1a1 UTSW 6 141,864,187 (GRCm39) critical splice donor site probably null
R0646:Slco1a1 UTSW 6 141,871,480 (GRCm39) splice site probably benign
R1674:Slco1a1 UTSW 6 141,881,661 (GRCm39) missense probably damaging 0.99
R1848:Slco1a1 UTSW 6 141,868,837 (GRCm39) missense probably benign 0.29
R3834:Slco1a1 UTSW 6 141,889,163 (GRCm39) missense possibly damaging 0.94
R3953:Slco1a1 UTSW 6 141,868,833 (GRCm39) missense probably damaging 1.00
R3974:Slco1a1 UTSW 6 141,854,819 (GRCm39) missense probably benign 0.01
R4081:Slco1a1 UTSW 6 141,881,688 (GRCm39) missense probably damaging 0.99
R4729:Slco1a1 UTSW 6 141,854,695 (GRCm39) missense probably benign 0.00
R4752:Slco1a1 UTSW 6 141,892,340 (GRCm39) missense possibly damaging 0.80
R4806:Slco1a1 UTSW 6 141,854,735 (GRCm39) missense possibly damaging 0.76
R4812:Slco1a1 UTSW 6 141,864,319 (GRCm39) missense probably damaging 1.00
R4963:Slco1a1 UTSW 6 141,868,825 (GRCm39) missense probably benign 0.26
R5641:Slco1a1 UTSW 6 141,885,695 (GRCm39) missense probably damaging 1.00
R6044:Slco1a1 UTSW 6 141,885,743 (GRCm39) missense probably benign 0.01
R6211:Slco1a1 UTSW 6 141,854,775 (GRCm39) missense probably benign 0.20
R6225:Slco1a1 UTSW 6 141,870,215 (GRCm39) missense possibly damaging 0.70
R6328:Slco1a1 UTSW 6 141,878,176 (GRCm39) missense probably damaging 1.00
R6428:Slco1a1 UTSW 6 141,871,416 (GRCm39) missense probably damaging 1.00
R6787:Slco1a1 UTSW 6 141,882,213 (GRCm39) missense probably benign 0.00
R7182:Slco1a1 UTSW 6 141,857,565 (GRCm39) missense probably damaging 1.00
R7305:Slco1a1 UTSW 6 141,870,223 (GRCm39) missense probably damaging 1.00
R7328:Slco1a1 UTSW 6 141,882,134 (GRCm39) missense possibly damaging 0.94
R7723:Slco1a1 UTSW 6 141,854,795 (GRCm39) missense probably damaging 0.97
R7784:Slco1a1 UTSW 6 141,889,114 (GRCm39) missense probably damaging 0.99
R8348:Slco1a1 UTSW 6 141,885,787 (GRCm39) missense possibly damaging 0.79
R8448:Slco1a1 UTSW 6 141,885,787 (GRCm39) missense possibly damaging 0.79
R8856:Slco1a1 UTSW 6 141,857,624 (GRCm39) missense probably damaging 1.00
R9121:Slco1a1 UTSW 6 141,892,542 (GRCm39) unclassified probably benign
R9484:Slco1a1 UTSW 6 141,854,672 (GRCm39) missense probably benign 0.00
Z1177:Slco1a1 UTSW 6 141,885,744 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- TCTCTCCAACCACCCATAGCATTTAACT -3'
(R):5'- AGGCCAAAATCATAATAGAGGGACCACA -3'

Sequencing Primer
(F):5'- ATGCTCAGACTCTGTCAAGG -3'
(R):5'- Ttctctctctctctctctctctctc -3'
Posted On 2013-10-16