Incidental Mutation 'IGL01384:Wif1'
ID |
78963 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Wif1
|
Ensembl Gene |
ENSMUSG00000020218 |
Gene Name |
Wnt inhibitory factor 1 |
Synonyms |
WIF-1 |
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL01384
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
120869909-120936547 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 120920855 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Serine
at position 226
(T226S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000020439
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000020439]
[ENSMUST00000175867]
|
AlphaFold |
Q9WUA1 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000020439
AA Change: T226S
PolyPhen 2
Score 0.549 (Sensitivity: 0.88; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000020439 Gene: ENSMUSG00000020218 AA Change: T226S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
WIF
|
35 |
179 |
8.47e-90 |
SMART |
EGF
|
181 |
210 |
3.88e-3 |
SMART |
EGF
|
213 |
242 |
4.46e-3 |
SMART |
EGF
|
245 |
274 |
4.7e-2 |
SMART |
EGF
|
277 |
306 |
1.69e-3 |
SMART |
EGF
|
309 |
338 |
7.95e0 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000145691
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175867
AA Change: T226S
PolyPhen 2
Score 0.158 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000135486 Gene: ENSMUSG00000020218 AA Change: T226S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
WIF
|
35 |
179 |
8.47e-90 |
SMART |
EGF
|
181 |
210 |
3.88e-3 |
SMART |
EGF
|
213 |
242 |
4.46e-3 |
SMART |
EGF
|
245 |
274 |
4.7e-2 |
SMART |
EGF
|
295 |
324 |
7.95e0 |
SMART |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene functions to inhibit WNT proteins, which are extracellular signaling molecules that play a role in embryonic development. This protein contains a WNT inhibitory factor (WIF) domain and five epidermal growth factor (EGF)-like domains, and is thought to be involved in mesoderm segmentation. This gene functions as a tumor suppressor gene, and has been found to be epigenetically silenced in various cancers. [provided by RefSeq, Jun 2010] PHENOTYPE: Homozygous null mice are viable and fertile but display increased susceptibility to spontaneous and induced osteosarcomas. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4932414N04Rik |
A |
G |
2: 68,575,749 (GRCm39) |
R683G |
possibly damaging |
Het |
Abca9 |
A |
G |
11: 110,036,463 (GRCm39) |
S549P |
probably damaging |
Het |
Adgrd1 |
T |
C |
5: 129,174,273 (GRCm39) |
S17P |
possibly damaging |
Het |
Ankrd36 |
C |
A |
11: 5,578,348 (GRCm39) |
H546N |
probably benign |
Het |
Aopep |
C |
T |
13: 63,338,290 (GRCm39) |
|
probably benign |
Het |
Bivm |
T |
G |
1: 44,165,907 (GRCm39) |
I119S |
possibly damaging |
Het |
Ccdc88a |
G |
T |
11: 29,453,915 (GRCm39) |
D1693Y |
probably damaging |
Het |
Clcn6 |
G |
A |
4: 148,103,423 (GRCm39) |
R242C |
probably damaging |
Het |
Clec4a2 |
A |
C |
6: 123,104,947 (GRCm39) |
K79T |
probably damaging |
Het |
Cspp1 |
G |
A |
1: 10,186,905 (GRCm39) |
R129H |
probably damaging |
Het |
Cyp2c40 |
A |
T |
19: 39,801,027 (GRCm39) |
M47K |
probably benign |
Het |
Dmxl1 |
A |
G |
18: 49,990,401 (GRCm39) |
D280G |
probably benign |
Het |
Fbxo38 |
A |
G |
18: 62,655,487 (GRCm39) |
S400P |
probably damaging |
Het |
Fsd1 |
C |
T |
17: 56,303,733 (GRCm39) |
S491F |
probably damaging |
Het |
Gen1 |
T |
C |
12: 11,305,242 (GRCm39) |
I184M |
probably benign |
Het |
Gm9949 |
A |
T |
18: 62,317,089 (GRCm39) |
|
probably benign |
Het |
Grtp1 |
A |
T |
8: 13,229,629 (GRCm39) |
V253E |
probably damaging |
Het |
Irag1 |
A |
G |
7: 110,525,708 (GRCm39) |
V148A |
possibly damaging |
Het |
Lamb1 |
T |
A |
12: 31,370,930 (GRCm39) |
M1327K |
probably benign |
Het |
Lrp2 |
T |
A |
2: 69,313,846 (GRCm39) |
D2295V |
probably damaging |
Het |
Lrp2 |
T |
C |
2: 69,284,156 (GRCm39) |
D3874G |
probably null |
Het |
Muc5b |
A |
T |
7: 141,400,555 (GRCm39) |
I509F |
unknown |
Het |
Mug1 |
A |
C |
6: 121,826,433 (GRCm39) |
|
probably benign |
Het |
Myh7 |
A |
T |
14: 55,208,916 (GRCm39) |
L1903Q |
probably damaging |
Het |
Mylk |
G |
T |
16: 34,759,322 (GRCm39) |
A1229S |
probably benign |
Het |
Myorg |
G |
T |
4: 41,498,151 (GRCm39) |
A493E |
probably damaging |
Het |
Ncam1 |
A |
T |
9: 49,421,152 (GRCm39) |
I721N |
possibly damaging |
Het |
Or8b101 |
T |
A |
9: 38,020,858 (GRCm39) |
I287N |
probably damaging |
Het |
Pla2g2c |
A |
G |
4: 138,471,012 (GRCm39) |
K131R |
probably benign |
Het |
Rpgrip1l |
A |
T |
8: 92,000,268 (GRCm39) |
I557N |
probably benign |
Het |
Sirpb1b |
T |
A |
3: 15,613,789 (GRCm39) |
N98Y |
probably damaging |
Het |
Stab1 |
A |
G |
14: 30,872,365 (GRCm39) |
V1182A |
probably benign |
Het |
Tagap1 |
T |
C |
17: 7,224,282 (GRCm39) |
D138G |
probably benign |
Het |
Tiam2 |
T |
A |
17: 3,477,477 (GRCm39) |
F567I |
probably benign |
Het |
Ush2a |
A |
T |
1: 188,285,425 (GRCm39) |
D1987V |
possibly damaging |
Het |
Vmn1r36 |
A |
T |
6: 66,693,446 (GRCm39) |
I37N |
probably damaging |
Het |
Zfp428 |
A |
G |
7: 24,210,167 (GRCm39) |
D22G |
possibly damaging |
Het |
Zfp521 |
A |
T |
18: 13,976,980 (GRCm39) |
N1144K |
probably benign |
Het |
|
Other mutations in Wif1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01707:Wif1
|
APN |
10 |
120,919,890 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01932:Wif1
|
APN |
10 |
120,931,940 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02183:Wif1
|
APN |
10 |
120,911,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R0653:Wif1
|
UTSW |
10 |
120,935,704 (GRCm39) |
missense |
probably benign |
0.01 |
R1858:Wif1
|
UTSW |
10 |
120,919,788 (GRCm39) |
splice site |
probably null |
|
R1869:Wif1
|
UTSW |
10 |
120,920,824 (GRCm39) |
missense |
probably benign |
0.00 |
R1871:Wif1
|
UTSW |
10 |
120,920,824 (GRCm39) |
missense |
probably benign |
0.00 |
R4056:Wif1
|
UTSW |
10 |
120,918,099 (GRCm39) |
missense |
probably benign |
0.04 |
R4057:Wif1
|
UTSW |
10 |
120,918,099 (GRCm39) |
missense |
probably benign |
0.04 |
R5056:Wif1
|
UTSW |
10 |
120,935,684 (GRCm39) |
missense |
probably benign |
0.00 |
R6242:Wif1
|
UTSW |
10 |
120,870,366 (GRCm39) |
missense |
possibly damaging |
0.82 |
R6504:Wif1
|
UTSW |
10 |
120,870,996 (GRCm39) |
missense |
probably damaging |
0.96 |
R7220:Wif1
|
UTSW |
10 |
120,926,019 (GRCm39) |
missense |
possibly damaging |
0.76 |
R7365:Wif1
|
UTSW |
10 |
120,919,814 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7456:Wif1
|
UTSW |
10 |
120,932,554 (GRCm39) |
missense |
probably benign |
|
R7707:Wif1
|
UTSW |
10 |
120,919,864 (GRCm39) |
missense |
probably damaging |
0.97 |
R8283:Wif1
|
UTSW |
10 |
120,931,952 (GRCm39) |
missense |
probably benign |
|
R8817:Wif1
|
UTSW |
10 |
120,932,621 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8940:Wif1
|
UTSW |
10 |
120,935,684 (GRCm39) |
missense |
probably benign |
0.11 |
R8959:Wif1
|
UTSW |
10 |
120,931,957 (GRCm39) |
missense |
probably damaging |
0.99 |
R9628:Wif1
|
UTSW |
10 |
120,932,549 (GRCm39) |
missense |
possibly damaging |
0.94 |
Z1176:Wif1
|
UTSW |
10 |
120,932,561 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2013-11-05 |