Incidental Mutation 'IGL01385:Vmn1r238'
| ID |
79001 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn1r238
|
| Ensembl Gene |
ENSMUSG00000091539 |
| Gene Name |
vomeronasal 1 receptor, 238 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.057)
|
| Stock # |
IGL01385
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
18 |
| Chromosomal Location |
3122492-3123412 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 3122770 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glutamine to Lysine
at position 215
(Q215K)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000129804
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000165255]
|
| AlphaFold |
E9Q373 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000165255
AA Change: Q215K
PolyPhen 2
Score 0.828 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000129804
Gene: ENSMUSG00000091539
AA Change: Q215K
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:TAS2R
|
7 |
302 |
5.3e-8 |
PFAM |
|
Pfam:7tm_1
|
27 |
292 |
8.8e-7 |
PFAM |
|
Pfam:V1R
|
34 |
298 |
1.9e-33 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 31 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ablim1 |
A |
T |
19: 57,057,346 (GRCm39) |
S292R |
probably damaging |
Het |
| Adamts19 |
A |
G |
18: 59,105,851 (GRCm39) |
T749A |
probably damaging |
Het |
| Agap2 |
A |
T |
10: 126,923,865 (GRCm39) |
I747F |
unknown |
Het |
| Arhgap35 |
T |
A |
7: 16,298,399 (GRCm39) |
N222I |
probably damaging |
Het |
| Atp10b |
A |
G |
11: 43,125,256 (GRCm39) |
E1074G |
probably damaging |
Het |
| Brd3 |
T |
C |
2: 27,354,101 (GRCm39) |
T4A |
possibly damaging |
Het |
| Col6a6 |
A |
G |
9: 105,660,865 (GRCm39) |
S415P |
probably damaging |
Het |
| Dennd2a |
A |
G |
6: 39,500,070 (GRCm39) |
V165A |
probably damaging |
Het |
| Dnm1l |
T |
A |
16: 16,159,317 (GRCm39) |
E95V |
probably damaging |
Het |
| Dock9 |
A |
G |
14: 121,817,995 (GRCm39) |
Y1609H |
possibly damaging |
Het |
| Esm1 |
A |
C |
13: 113,353,216 (GRCm39) |
E166A |
possibly damaging |
Het |
| F2rl2 |
A |
C |
13: 95,837,836 (GRCm39) |
I294L |
probably benign |
Het |
| Gstt3 |
A |
G |
10: 75,610,822 (GRCm39) |
S187P |
probably benign |
Het |
| Katna1 |
T |
C |
10: 7,628,574 (GRCm39) |
C268R |
probably damaging |
Het |
| Mbd5 |
T |
A |
2: 49,140,233 (GRCm39) |
C66S |
possibly damaging |
Het |
| Naa35 |
G |
A |
13: 59,748,880 (GRCm39) |
E167K |
probably damaging |
Het |
| Or10ak16 |
T |
C |
4: 118,750,748 (GRCm39) |
L156S |
probably benign |
Het |
| Osbpl2 |
A |
G |
2: 179,778,873 (GRCm39) |
N2S |
probably benign |
Het |
| Parp6 |
T |
C |
9: 59,537,895 (GRCm39) |
|
probably benign |
Het |
| Pcdhb5 |
T |
A |
18: 37,455,267 (GRCm39) |
V549E |
probably benign |
Het |
| Pcnx4 |
T |
C |
12: 72,620,520 (GRCm39) |
L780P |
probably damaging |
Het |
| Plcb3 |
A |
T |
19: 6,935,276 (GRCm39) |
D851E |
probably benign |
Het |
| Ppfia2 |
A |
G |
10: 106,749,560 (GRCm39) |
S1149G |
probably damaging |
Het |
| Prkca |
A |
G |
11: 107,869,178 (GRCm39) |
V469A |
probably damaging |
Het |
| Ryr1 |
A |
T |
7: 28,756,410 (GRCm39) |
V3468D |
probably damaging |
Het |
| Spmip3 |
G |
A |
1: 177,568,640 (GRCm39) |
G46R |
probably benign |
Het |
| Stxbp4 |
A |
G |
11: 90,431,074 (GRCm39) |
V412A |
possibly damaging |
Het |
| Wdr11 |
A |
G |
7: 129,209,637 (GRCm39) |
M482V |
probably benign |
Het |
| Wdr72 |
T |
C |
9: 74,086,788 (GRCm39) |
|
probably benign |
Het |
| Xirp2 |
T |
C |
2: 67,340,021 (GRCm39) |
L754P |
probably damaging |
Het |
| Zmym6 |
G |
A |
4: 127,017,899 (GRCm39) |
G1135S |
probably benign |
Het |
|
| Other mutations in Vmn1r238 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00427:Vmn1r238
|
APN |
18 |
3,123,243 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02716:Vmn1r238
|
APN |
18 |
3,123,124 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1219:Vmn1r238
|
UTSW |
18 |
3,123,135 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R1568:Vmn1r238
|
UTSW |
18 |
3,123,358 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1864:Vmn1r238
|
UTSW |
18 |
3,123,040 (GRCm39) |
nonsense |
probably null |
|
|
R3024:Vmn1r238
|
UTSW |
18 |
3,123,305 (GRCm39) |
missense |
probably benign |
0.13 |
|
R4291:Vmn1r238
|
UTSW |
18 |
3,123,214 (GRCm39) |
nonsense |
probably null |
|
|
R4304:Vmn1r238
|
UTSW |
18 |
3,123,040 (GRCm39) |
nonsense |
probably null |
|
|
R4586:Vmn1r238
|
UTSW |
18 |
3,123,294 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4664:Vmn1r238
|
UTSW |
18 |
3,123,300 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5123:Vmn1r238
|
UTSW |
18 |
3,123,243 (GRCm39) |
missense |
probably benign |
|
|
R5430:Vmn1r238
|
UTSW |
18 |
3,122,521 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R5834:Vmn1r238
|
UTSW |
18 |
3,123,168 (GRCm39) |
missense |
probably benign |
|
|
R7186:Vmn1r238
|
UTSW |
18 |
3,122,661 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7206:Vmn1r238
|
UTSW |
18 |
3,122,623 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R7308:Vmn1r238
|
UTSW |
18 |
3,122,875 (GRCm39) |
missense |
probably benign |
0.09 |
|
R7346:Vmn1r238
|
UTSW |
18 |
3,123,151 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7467:Vmn1r238
|
UTSW |
18 |
3,123,393 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7571:Vmn1r238
|
UTSW |
18 |
3,122,721 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7808:Vmn1r238
|
UTSW |
18 |
3,123,033 (GRCm39) |
missense |
probably benign |
0.03 |
|
R8085:Vmn1r238
|
UTSW |
18 |
3,123,151 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8086:Vmn1r238
|
UTSW |
18 |
3,123,250 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8325:Vmn1r238
|
UTSW |
18 |
3,122,529 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8423:Vmn1r238
|
UTSW |
18 |
3,123,365 (GRCm39) |
nonsense |
probably null |
|
|
R8747:Vmn1r238
|
UTSW |
18 |
3,123,232 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R8930:Vmn1r238
|
UTSW |
18 |
3,123,127 (GRCm39) |
missense |
probably benign |
0.03 |
|
R8932:Vmn1r238
|
UTSW |
18 |
3,123,127 (GRCm39) |
missense |
probably benign |
0.03 |
|
R9279:Vmn1r238
|
UTSW |
18 |
3,122,994 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9382:Vmn1r238
|
UTSW |
18 |
3,122,676 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9644:Vmn1r238
|
UTSW |
18 |
3,122,635 (GRCm39) |
missense |
probably benign |
0.10 |
|
R9725:Vmn1r238
|
UTSW |
18 |
3,122,577 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1177:Vmn1r238
|
UTSW |
18 |
3,122,505 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Posted On |
2013-11-05 |
Incidental Mutation