Incidental Mutation 'R0966:Or52a5'
| ID |
84053 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or52a5
|
| Ensembl Gene |
ENSMUSG00000061626 |
| Gene Name |
olfactory receptor family 52 subfamily A member 5 |
| Synonyms |
Olfr68, MOR22-3, GA_x6K02T2PBJ9-6504436-6503489, 3'[b]2 |
| MMRRC Submission |
039095-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.050)
|
| Stock # |
R0966 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
103426603-103427550 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 103426656 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Serine
at position 299
(T299S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150493
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000072513]
[ENSMUST00000216811]
|
| AlphaFold |
E9PYY2 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000072513
AA Change: T299S
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000072329
Gene: ENSMUSG00000061626
AA Change: T299S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
313 |
3e-101 |
PFAM |
|
Pfam:7TM_GPCR_Srx
|
34 |
237 |
4.5e-7 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
37 |
264 |
1.7e-6 |
PFAM |
|
Pfam:7tm_1
|
43 |
295 |
2.3e-14 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216811
AA Change: T299S
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 96.8%
- 20x: 94.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 19 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2310061N02Rik |
T |
A |
16: 88,504,310 (GRCm39) |
R162S |
probably damaging |
Het |
| Arhgef10 |
T |
G |
8: 14,990,343 (GRCm39) |
S272A |
probably benign |
Het |
| Cd101 |
A |
C |
3: 100,915,538 (GRCm39) |
S676R |
probably benign |
Het |
| Efcab5 |
G |
A |
11: 77,031,749 (GRCm39) |
R42W |
probably damaging |
Het |
| Flrt2 |
T |
C |
12: 95,747,075 (GRCm39) |
V471A |
possibly damaging |
Het |
| Fzd8 |
A |
T |
18: 9,214,745 (GRCm39) |
E609V |
probably damaging |
Het |
| Gm10110 |
A |
C |
14: 90,135,555 (GRCm39) |
|
noncoding transcript |
Het |
| Hsh2d |
G |
A |
8: 72,954,304 (GRCm39) |
D229N |
probably benign |
Het |
| Igf2bp2 |
C |
T |
16: 21,907,840 (GRCm39) |
R19Q |
probably damaging |
Het |
| Mmp16 |
C |
G |
4: 18,115,930 (GRCm39) |
N511K |
probably benign |
Het |
| Myo7b |
T |
C |
18: 32,131,816 (GRCm39) |
H460R |
probably damaging |
Het |
| Plekhh1 |
T |
C |
12: 79,112,504 (GRCm39) |
F594L |
probably damaging |
Het |
| Prkca |
T |
A |
11: 107,905,110 (GRCm39) |
K209N |
possibly damaging |
Het |
| Slc5a2 |
G |
C |
7: 127,869,803 (GRCm39) |
R412P |
probably damaging |
Het |
| Slco1a7 |
A |
G |
6: 141,673,299 (GRCm39) |
F413S |
probably benign |
Het |
| Ugt1a6b |
G |
A |
1: 88,034,850 (GRCm39) |
V63I |
probably benign |
Het |
| Ugt2b38 |
T |
G |
5: 87,560,232 (GRCm39) |
N361H |
probably damaging |
Het |
| Vps36 |
G |
A |
8: 22,696,833 (GRCm39) |
W131* |
probably null |
Het |
| Wdr3 |
A |
T |
3: 100,068,385 (GRCm39) |
V41E |
probably damaging |
Het |
|
| Other mutations in Or52a5 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01295:Or52a5
|
APN |
7 |
103,427,448 (GRCm39) |
missense |
probably benign |
|
|
IGL03310:Or52a5
|
APN |
7 |
103,426,634 (GRCm39) |
missense |
probably benign |
0.04 |
|
R0135:Or52a5
|
UTSW |
7 |
103,426,970 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0462:Or52a5
|
UTSW |
7 |
103,426,770 (GRCm39) |
missense |
probably benign |
0.37 |
|
R1199:Or52a5
|
UTSW |
7 |
103,427,192 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1288:Or52a5
|
UTSW |
7 |
103,427,249 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R1597:Or52a5
|
UTSW |
7 |
103,427,267 (GRCm39) |
missense |
probably benign |
|
|
R4631:Or52a5
|
UTSW |
7 |
103,426,682 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4754:Or52a5
|
UTSW |
7 |
103,426,875 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5184:Or52a5
|
UTSW |
7 |
103,426,611 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5654:Or52a5
|
UTSW |
7 |
103,427,182 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7994:Or52a5
|
UTSW |
7 |
103,426,607 (GRCm39) |
missense |
probably benign |
0.05 |
|
R8026:Or52a5
|
UTSW |
7 |
103,427,547 (GRCm39) |
missense |
probably benign |
|
|
R8190:Or52a5
|
UTSW |
7 |
103,426,802 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8502:Or52a5
|
UTSW |
7 |
103,426,968 (GRCm39) |
missense |
probably benign |
|
|
R8815:Or52a5
|
UTSW |
7 |
103,427,063 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
| Predicted Primers |
PCR Primer
(F):5'- TCTGGAATTCACATGCGACAGCA -3'
(R):5'- GCCATTGTGAAACTGGCAGCTC -3'
Sequencing Primer
(F):5'- GCGACAGCATATATTTGTATTGGAG -3'
(R):5'- AGGCTCGATTCAAAGCCTTC -3'
|
| Posted On |
2013-11-08 |
Incidental Mutation