Mutagenetix > Incidental Mutation

Incidental Mutation 'R0966:Plekhh1'

84062

Institutional Source

Beutler Lab

Gene Symbol

Plekhh1

Ensembl Gene

ENSMUSG00000060716

Gene Name

pleckstrin homology domain containing, family H (with MyTH4 domain) member 1

Synonyms

D630024D12Rik

MMRRC Submission

039095-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R0966 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

79075937-79128429 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 79112504 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 594 (F594L)

Ref Sequence

ENSEMBL: ENSMUSP00000151747 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000039928] [ENSMUST00000219956]

AlphaFold

Q80TI1

Predicted Effect

probably damaging
Transcript: ENSMUST00000039928
AA Change: F594L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000049460
Gene: ENSMUSG00000060716
AA Change: F594L

Domain	Start	End	E-Value	Type
coiled coil region	26	172	N/A	INTRINSIC
low complexity region	363	379	N/A	INTRINSIC
low complexity region	489	500	N/A	INTRINSIC
PH	573	668	1.15e-22	SMART
PH	682	792	3.23e-8	SMART
MyTH4	826	980	3e-48	SMART
B41	987	1224	6.07e-22	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000219946

Predicted Effect

probably damaging
Transcript: ENSMUST00000219956
AA Change: F594L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 96.8%
20x: 94.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 19 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2310061N02Rik	T	A	16: 88,504,310 (GRCm39)	R162S	probably damaging	Het
Arhgef10	T	G	8: 14,990,343 (GRCm39)	S272A	probably benign	Het
Cd101	A	C	3: 100,915,538 (GRCm39)	S676R	probably benign	Het
Efcab5	G	A	11: 77,031,749 (GRCm39)	R42W	probably damaging	Het
Flrt2	T	C	12: 95,747,075 (GRCm39)	V471A	possibly damaging	Het
Fzd8	A	T	18: 9,214,745 (GRCm39)	E609V	probably damaging	Het
Gm10110	A	C	14: 90,135,555 (GRCm39)		noncoding transcript	Het
Hsh2d	G	A	8: 72,954,304 (GRCm39)	D229N	probably benign	Het
Igf2bp2	C	T	16: 21,907,840 (GRCm39)	R19Q	probably damaging	Het
Mmp16	C	G	4: 18,115,930 (GRCm39)	N511K	probably benign	Het
Myo7b	T	C	18: 32,131,816 (GRCm39)	H460R	probably damaging	Het
Or52a5	T	A	7: 103,426,656 (GRCm39)	T299S	probably damaging	Het
Prkca	T	A	11: 107,905,110 (GRCm39)	K209N	possibly damaging	Het
Slc5a2	G	C	7: 127,869,803 (GRCm39)	R412P	probably damaging	Het
Slco1a7	A	G	6: 141,673,299 (GRCm39)	F413S	probably benign	Het
Ugt1a6b	G	A	1: 88,034,850 (GRCm39)	V63I	probably benign	Het
Ugt2b38	T	G	5: 87,560,232 (GRCm39)	N361H	probably damaging	Het
Vps36	G	A	8: 22,696,833 (GRCm39)	W131*	probably null	Het
Wdr3	A	T	3: 100,068,385 (GRCm39)	V41E	probably damaging	Het

Other mutations in Plekhh1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01707:Plekhh1	APN	12	79,125,738 (GRCm39)	missense	probably benign	0.35
IGL01764:Plekhh1	APN	12	79,101,679 (GRCm39)	missense	probably benign	0.00
IGL01922:Plekhh1	APN	12	79,126,353 (GRCm39)	missense	probably benign
IGL02187:Plekhh1	APN	12	79,119,592 (GRCm39)	missense	probably damaging	1.00
IGL02406:Plekhh1	APN	12	79,115,783 (GRCm39)	splice site	probably benign
IGL02581:Plekhh1	APN	12	79,125,882 (GRCm39)	critical splice donor site	probably null
IGL03201:Plekhh1	APN	12	79,100,430 (GRCm39)	missense	probably damaging	1.00
R0088:Plekhh1	UTSW	12	79,102,140 (GRCm39)	missense	probably benign	0.00
R0626:Plekhh1	UTSW	12	79,087,359 (GRCm39)	nonsense	probably null
R0662:Plekhh1	UTSW	12	79,125,767 (GRCm39)	missense	probably benign	0.09
R0666:Plekhh1	UTSW	12	79,115,889 (GRCm39)	missense	probably damaging	0.99
R1027:Plekhh1	UTSW	12	79,101,256 (GRCm39)	splice site	probably benign
R1507:Plekhh1	UTSW	12	79,126,224 (GRCm39)	missense	probably damaging	1.00
R1562:Plekhh1	UTSW	12	79,123,482 (GRCm39)	missense	probably benign	0.00
R1759:Plekhh1	UTSW	12	79,119,535 (GRCm39)	missense	probably damaging	1.00
R1839:Plekhh1	UTSW	12	79,125,731 (GRCm39)	splice site	probably benign
R2125:Plekhh1	UTSW	12	79,125,774 (GRCm39)	missense	probably damaging	1.00
R2345:Plekhh1	UTSW	12	79,100,421 (GRCm39)	missense	probably damaging	1.00
R3895:Plekhh1	UTSW	12	79,102,006 (GRCm39)	missense	probably benign
R3927:Plekhh1	UTSW	12	79,100,422 (GRCm39)	missense	probably damaging	1.00
R4039:Plekhh1	UTSW	12	79,101,957 (GRCm39)	missense	probably benign	0.01
R4720:Plekhh1	UTSW	12	79,122,194 (GRCm39)	frame shift	probably null
R4721:Plekhh1	UTSW	12	79,122,194 (GRCm39)	frame shift	probably null
R4824:Plekhh1	UTSW	12	79,101,577 (GRCm39)	missense	probably benign
R4869:Plekhh1	UTSW	12	79,097,160 (GRCm39)	missense	probably benign
R5114:Plekhh1	UTSW	12	79,115,880 (GRCm39)	missense	probably benign	0.00
R5809:Plekhh1	UTSW	12	79,125,461 (GRCm39)	missense	probably benign	0.26
R6540:Plekhh1	UTSW	12	79,111,263 (GRCm39)	missense	probably benign	0.14
R6977:Plekhh1	UTSW	12	79,112,491 (GRCm39)	missense	probably damaging	1.00
R7058:Plekhh1	UTSW	12	79,122,204 (GRCm39)	missense	probably damaging	1.00
R7103:Plekhh1	UTSW	12	79,113,429 (GRCm39)	missense	probably benign	0.01
R7120:Plekhh1	UTSW	12	79,117,713 (GRCm39)	missense	probably benign	0.03
R7134:Plekhh1	UTSW	12	79,109,390 (GRCm39)	missense	probably benign	0.00
R7209:Plekhh1	UTSW	12	79,097,150 (GRCm39)	missense	probably benign	0.04
R7403:Plekhh1	UTSW	12	79,087,351 (GRCm39)	nonsense	probably null
R7405:Plekhh1	UTSW	12	79,101,821 (GRCm39)	missense	probably benign	0.00
R7449:Plekhh1	UTSW	12	79,126,326 (GRCm39)	missense	probably benign	0.00
R7594:Plekhh1	UTSW	12	79,123,277 (GRCm39)	missense	possibly damaging	0.89
R7648:Plekhh1	UTSW	12	79,101,905 (GRCm39)	missense	probably benign	0.20
R7756:Plekhh1	UTSW	12	79,117,578 (GRCm39)	missense	probably benign	0.15
R7758:Plekhh1	UTSW	12	79,117,578 (GRCm39)	missense	probably benign	0.15
R8033:Plekhh1	UTSW	12	79,117,710 (GRCm39)	missense	probably benign	0.23
R8153:Plekhh1	UTSW	12	79,125,812 (GRCm39)	missense	probably benign	0.00
R8243:Plekhh1	UTSW	12	79,125,843 (GRCm39)	missense	probably benign
R8728:Plekhh1	UTSW	12	79,115,862 (GRCm39)	missense	possibly damaging	0.90
R8992:Plekhh1	UTSW	12	79,122,307 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GGCGGCCTAGACCATTTTGTCTTC -3'
(R):5'- TGACTCAGTACCTCCAAAGGCCAG -3'

Sequencing Primer
(F):5'- GGGTCCTCAAGCGACTTC -3'
(R):5'- TCCAAAGGCCAGGCAGG -3'

Posted On

2013-11-08