Incidental Mutation 'IGL01470:Gbp10'
ID |
88258 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Gbp10
|
Ensembl Gene |
ENSMUSG00000105096 |
Gene Name |
guanylate-binding protein 10 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.065)
|
Stock # |
IGL01470
|
Quality Score |
|
Status
|
|
Chromosome |
5 |
Chromosomal Location |
105363565-105387399 bp(-) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
A to G
at 105368980 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000069042
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050011]
[ENSMUST00000065588]
|
AlphaFold |
Q000W5 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000050011
|
SMART Domains |
Protein: ENSMUSP00000062528 Gene: ENSMUSG00000079362
Domain | Start | End | E-Value | Type |
Pfam:GBP
|
16 |
279 |
7.6e-118 |
PFAM |
Pfam:GBP_C
|
281 |
575 |
2.1e-117 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000065588
|
SMART Domains |
Protein: ENSMUSP00000069042 Gene: ENSMUSG00000105096
Domain | Start | End | E-Value | Type |
Pfam:GBP
|
16 |
279 |
5e-115 |
PFAM |
Pfam:GBP_C
|
281 |
575 |
3.6e-117 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000196634
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 37 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
3425401B19Rik |
T |
C |
14: 32,382,414 (GRCm39) |
T1184A |
possibly damaging |
Het |
A2ml1 |
A |
G |
6: 128,557,375 (GRCm39) |
I106T |
probably damaging |
Het |
Asic4 |
C |
T |
1: 75,427,510 (GRCm39) |
A12V |
probably damaging |
Het |
Cacna1d |
A |
T |
14: 29,821,099 (GRCm39) |
V1139D |
probably damaging |
Het |
Edc4 |
T |
C |
8: 106,616,613 (GRCm39) |
|
probably benign |
Het |
Eif4h |
A |
T |
5: 134,654,393 (GRCm39) |
|
probably null |
Het |
Exog |
C |
A |
9: 119,291,592 (GRCm39) |
Q290K |
probably damaging |
Het |
Fam83c |
A |
T |
2: 155,676,728 (GRCm39) |
I14K |
possibly damaging |
Het |
Fes |
A |
T |
7: 80,033,021 (GRCm39) |
Y268N |
probably benign |
Het |
Fhod1 |
A |
G |
8: 106,056,281 (GRCm39) |
L1144P |
probably damaging |
Het |
Frem3 |
C |
T |
8: 81,340,944 (GRCm39) |
T1079I |
probably damaging |
Het |
Herc1 |
T |
C |
9: 66,404,918 (GRCm39) |
V4496A |
possibly damaging |
Het |
Lamb1 |
A |
G |
12: 31,350,261 (GRCm39) |
R729G |
possibly damaging |
Het |
Lifr |
T |
A |
15: 7,205,147 (GRCm39) |
C461* |
probably null |
Het |
Lypd6 |
T |
C |
2: 50,078,795 (GRCm39) |
V97A |
probably benign |
Het |
Map3k5 |
A |
G |
10: 19,993,933 (GRCm39) |
E973G |
possibly damaging |
Het |
Mep1b |
A |
T |
18: 21,230,524 (GRCm39) |
N692I |
probably benign |
Het |
Mrpl15 |
A |
G |
1: 4,846,754 (GRCm39) |
V274A |
probably damaging |
Het |
Naaa |
A |
G |
5: 92,411,507 (GRCm39) |
I264T |
probably damaging |
Het |
Nlrp4c |
T |
C |
7: 6,103,783 (GRCm39) |
C906R |
possibly damaging |
Het |
Or1j15 |
T |
A |
2: 36,458,754 (GRCm39) |
L48H |
probably damaging |
Het |
Or4x11 |
T |
C |
2: 89,868,162 (GRCm39) |
W300R |
possibly damaging |
Het |
Or5b95 |
T |
C |
19: 12,658,035 (GRCm39) |
S188P |
possibly damaging |
Het |
Or8b38 |
A |
T |
9: 37,973,300 (GRCm39) |
H228L |
possibly damaging |
Het |
Or8k3 |
T |
C |
2: 86,058,628 (GRCm39) |
N229S |
probably benign |
Het |
Phc2 |
C |
T |
4: 128,616,903 (GRCm39) |
T392I |
probably benign |
Het |
Ptprg |
G |
A |
14: 12,213,702 (GRCm38) |
W248* |
probably null |
Het |
Pzp |
T |
A |
6: 128,498,087 (GRCm39) |
E243D |
probably benign |
Het |
Rbm33 |
T |
A |
5: 28,592,846 (GRCm39) |
L542Q |
probably damaging |
Het |
Recql4 |
G |
A |
15: 76,593,144 (GRCm39) |
T229I |
probably benign |
Het |
Ssbp3 |
T |
C |
4: 106,894,855 (GRCm39) |
|
probably benign |
Het |
Tfap2d |
A |
T |
1: 19,218,620 (GRCm39) |
Q373L |
probably damaging |
Het |
Timmdc1 |
A |
G |
16: 38,338,902 (GRCm39) |
|
probably benign |
Het |
Tiparp |
G |
T |
3: 65,460,030 (GRCm39) |
G442* |
probably null |
Het |
Vmn2r4 |
A |
T |
3: 64,313,816 (GRCm39) |
N388K |
probably damaging |
Het |
Vps13c |
T |
C |
9: 67,820,209 (GRCm39) |
|
probably benign |
Het |
Zfp551 |
A |
G |
7: 12,152,468 (GRCm39) |
|
probably null |
Het |
|
Other mutations in Gbp10 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01680:Gbp10
|
APN |
5 |
105,372,137 (GRCm39) |
splice site |
probably null |
|
IGL01809:Gbp10
|
APN |
5 |
105,365,225 (GRCm39) |
missense |
probably benign |
|
IGL01845:Gbp10
|
APN |
5 |
105,367,815 (GRCm39) |
splice site |
probably null |
|
IGL02011:Gbp10
|
APN |
5 |
105,368,967 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02063:Gbp10
|
APN |
5 |
105,383,906 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL02533:Gbp10
|
APN |
5 |
105,367,901 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02612:Gbp10
|
APN |
5 |
105,366,368 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0349:Gbp10
|
UTSW |
5 |
105,368,942 (GRCm39) |
missense |
possibly damaging |
0.60 |
R0462:Gbp10
|
UTSW |
5 |
105,366,390 (GRCm39) |
missense |
possibly damaging |
0.67 |
R0535:Gbp10
|
UTSW |
5 |
105,368,877 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1223:Gbp10
|
UTSW |
5 |
105,366,867 (GRCm39) |
missense |
probably damaging |
1.00 |
R1704:Gbp10
|
UTSW |
5 |
105,372,217 (GRCm39) |
missense |
probably damaging |
1.00 |
R1792:Gbp10
|
UTSW |
5 |
105,372,166 (GRCm39) |
missense |
probably damaging |
1.00 |
R3738:Gbp10
|
UTSW |
5 |
105,372,324 (GRCm39) |
missense |
possibly damaging |
0.84 |
R3739:Gbp10
|
UTSW |
5 |
105,372,324 (GRCm39) |
missense |
possibly damaging |
0.84 |
R4035:Gbp10
|
UTSW |
5 |
105,372,324 (GRCm39) |
missense |
possibly damaging |
0.84 |
R4421:Gbp10
|
UTSW |
5 |
105,372,517 (GRCm39) |
splice site |
probably null |
|
R5207:Gbp10
|
UTSW |
5 |
105,372,575 (GRCm39) |
missense |
probably benign |
0.05 |
R5338:Gbp10
|
UTSW |
5 |
105,372,166 (GRCm39) |
missense |
probably damaging |
1.00 |
R6010:Gbp10
|
UTSW |
5 |
105,372,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R6045:Gbp10
|
UTSW |
5 |
105,366,269 (GRCm39) |
missense |
probably damaging |
0.98 |
R6156:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R6285:Gbp10
|
UTSW |
5 |
105,366,326 (GRCm39) |
missense |
probably damaging |
1.00 |
R6525:Gbp10
|
UTSW |
5 |
105,383,950 (GRCm39) |
missense |
probably benign |
0.01 |
R6908:Gbp10
|
UTSW |
5 |
105,368,898 (GRCm39) |
missense |
probably damaging |
0.97 |
R7339:Gbp10
|
UTSW |
5 |
105,367,964 (GRCm39) |
missense |
possibly damaging |
0.77 |
R7396:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7397:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7399:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7554:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7555:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7574:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7575:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7576:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7577:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7578:Gbp10
|
UTSW |
5 |
105,384,015 (GRCm39) |
start gained |
probably benign |
|
R7975:Gbp10
|
UTSW |
5 |
105,368,967 (GRCm39) |
missense |
probably benign |
0.20 |
R8293:Gbp10
|
UTSW |
5 |
105,372,235 (GRCm39) |
missense |
probably damaging |
1.00 |
R8708:Gbp10
|
UTSW |
5 |
105,368,831 (GRCm39) |
missense |
probably damaging |
1.00 |
R9002:Gbp10
|
UTSW |
5 |
105,369,847 (GRCm39) |
missense |
probably benign |
0.00 |
R9086:Gbp10
|
UTSW |
5 |
105,366,369 (GRCm39) |
missense |
probably benign |
0.00 |
R9149:Gbp10
|
UTSW |
5 |
105,366,861 (GRCm39) |
missense |
probably damaging |
0.98 |
R9402:Gbp10
|
UTSW |
5 |
105,381,863 (GRCm39) |
missense |
possibly damaging |
0.82 |
R9582:Gbp10
|
UTSW |
5 |
105,372,256 (GRCm39) |
missense |
probably benign |
0.05 |
|
Posted On |
2013-11-18 |