Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01514:Rcl1'

89326

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Rcl1

Ensembl Gene

ENSMUSG00000024785

Gene Name

RNA terminal phosphate cyclase-like 1

Synonyms

RPCL1, 2310040A02Rik, Rnac

Accession Numbers

Essential gene?

Probably essential (E-score: 0.966) question?

Stock #

IGL01514

Quality Score

Status

Chromosome

Chromosomal Location

29078761-29121251 bp(+) (GRCm39)

Type of Mutation

utr 3 prime

DNA Base Change (assembly)

T to C at 29120698 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000067579 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000064393]

AlphaFold

Q9JJT0

Predicted Effect

probably benign
Transcript: ENSMUST00000064393

SMART Domains

Protein: ENSMUSP00000067579
Gene: ENSMUSG00000024785

Domain	Start	End	E-Value	Type
Pfam:RTC	8	341	1.3e-61	PFAM
Pfam:RTC_insert	184	289	1.8e-37	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 34 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Accs	A	G	2: 93,669,587 (GRCm39)		probably benign	Het
Actl7b	T	C	4: 56,740,677 (GRCm39)	Y227C	probably damaging	Het
Adam26a	A	T	8: 44,021,485 (GRCm39)	H668Q	probably benign	Het
Alcam	A	T	16: 52,094,653 (GRCm39)		probably benign	Het
Aldh3a2	C	T	11: 61,144,624 (GRCm39)		probably benign	Het
Atp11b	G	T	3: 35,891,130 (GRCm39)	G801V	probably damaging	Het
C3	G	A	17: 57,522,866 (GRCm39)	T1006I	probably benign	Het
Cacna2d4	T	C	6: 119,259,134 (GRCm39)		probably benign	Het
Cldn34b3	A	T	X: 75,310,680 (GRCm39)	I83F	probably damaging	Het
Clec2g	G	A	6: 128,925,736 (GRCm39)	M48I	probably benign	Het
Coch	A	G	12: 51,650,136 (GRCm39)	D375G	probably damaging	Het
Erbb2	C	T	11: 98,323,745 (GRCm39)	T653I	possibly damaging	Het
Etv3	A	G	3: 87,443,025 (GRCm39)	H203R	possibly damaging	Het
Fat4	A	G	3: 39,003,683 (GRCm39)	R1801G	possibly damaging	Het
Gars1	T	A	6: 55,042,505 (GRCm39)	S413T	probably benign	Het
Gnat1	G	A	9: 107,553,500 (GRCm39)	R253C	possibly damaging	Het
Hook3	A	T	8: 26,578,217 (GRCm39)	L91I	possibly damaging	Het
Lrp8	T	C	4: 107,712,881 (GRCm39)	Y377H	probably damaging	Het
Lztr1	G	A	16: 17,340,255 (GRCm39)		probably null	Het
Malt1	A	G	18: 65,609,471 (GRCm39)	D825G	possibly damaging	Het
Nlrp9b	T	C	7: 19,779,859 (GRCm39)		probably null	Het
Or1x2	C	T	11: 50,918,416 (GRCm39)	R196*	probably null	Het
Or2v2	A	T	11: 49,004,403 (GRCm39)	I50N	probably damaging	Het
Orc1	A	G	4: 108,459,249 (GRCm39)	R473G	probably damaging	Het
Pard6g	G	A	18: 80,160,661 (GRCm39)	R258H	probably damaging	Het
Pkdrej	T	C	15: 85,702,264 (GRCm39)	D1224G	possibly damaging	Het
Polr1e	A	G	4: 45,018,723 (GRCm39)	T18A	probably benign	Het
Pycr3	T	C	15: 75,788,853 (GRCm39)	T240A	probably damaging	Het
Ralgapa1	C	A	12: 55,766,442 (GRCm39)	G1284V	probably damaging	Het
Sec24c	C	T	14: 20,732,839 (GRCm39)	T134I	possibly damaging	Het
Sis	A	G	3: 72,843,253 (GRCm39)		probably benign	Het
Susd5	A	C	9: 113,897,947 (GRCm39)		probably benign	Het
Tlk1	T	C	2: 70,582,610 (GRCm39)	N173S	probably benign	Het
Uroc1	T	C	6: 90,340,082 (GRCm39)		probably benign	Het

Other mutations in Rcl1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01325:Rcl1	APN	19	29,098,662 (GRCm39)	splice site	probably null
IGL02625:Rcl1	APN	19	29,095,741 (GRCm39)	missense	probably benign	0.04
R0512:Rcl1	UTSW	19	29,105,497 (GRCm39)	missense	probably damaging	1.00
R2249:Rcl1	UTSW	19	29,099,268 (GRCm39)	missense	possibly damaging	0.46
R3610:Rcl1	UTSW	19	29,095,630 (GRCm39)	missense	probably benign	0.00
R4415:Rcl1	UTSW	19	29,095,762 (GRCm39)	missense	probably benign	0.01
R5324:Rcl1	UTSW	19	29,105,401 (GRCm39)	missense	probably benign	0.23
R5679:Rcl1	UTSW	19	29,098,658 (GRCm39)	splice site	probably null
R5988:Rcl1	UTSW	19	29,099,167 (GRCm39)	missense	probably damaging	1.00
R7332:Rcl1	UTSW	19	29,108,096 (GRCm39)	missense	probably benign	0.03
R7936:Rcl1	UTSW	19	29,095,805 (GRCm39)	splice site	probably null
R8353:Rcl1	UTSW	19	29,093,159 (GRCm39)	missense	possibly damaging	0.95
R8453:Rcl1	UTSW	19	29,093,159 (GRCm39)	missense	possibly damaging	0.95
R9282:Rcl1	UTSW	19	29,093,170 (GRCm39)	missense	probably damaging	0.99
R9747:Rcl1	UTSW	19	29,105,482 (GRCm39)	missense	probably damaging	0.98
Z1176:Rcl1	UTSW	19	29,079,017 (GRCm39)	missense	probably benign

Posted On

2013-12-03