Incidental Mutation 'IGL01518:Hsf2'
ID |
89369 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Hsf2
|
Ensembl Gene |
ENSMUSG00000019878 |
Gene Name |
heat shock factor 2 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL01518
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
57362481-57389231 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 57388230 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Proline
at position 458
(L458P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000152013
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000020027]
[ENSMUST00000079833]
[ENSMUST00000220042]
[ENSMUST00000220353]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000020027
|
SMART Domains |
Protein: ENSMUSP00000020027 Gene: ENSMUSG00000019877
Domain | Start | End | E-Value | Type |
Pfam:Serinc
|
16 |
451 |
9.5e-178 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000079833
AA Change: L497P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000078761 Gene: ENSMUSG00000019878 AA Change: L497P
Domain | Start | End | E-Value | Type |
HSF
|
6 |
110 |
1.99e-62 |
SMART |
coiled coil region
|
133 |
176 |
N/A |
INTRINSIC |
Pfam:Vert_HS_TF
|
230 |
392 |
1.5e-39 |
PFAM |
Pfam:Vert_HS_TF
|
391 |
494 |
2.2e-18 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000220042
AA Change: L458P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220162
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000220353
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene belongs to the HSF family of transcription factors that bind specifically to the heat-shock promoter element and activate transcription. Heat shock transcription factors activate heat-shock response genes under conditions of heat or other stresses. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2011] PHENOTYPE: Homozygotes for targeted null mutations exhibit increased late-gestational lethality associated with collapsed lateral ventricles and ventricular bleeding. Survivors may show ventricular dilation, sterility in females, and reduced sperm counts in males. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 27 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930447F04Rik |
A |
C |
X: 65,347,660 (GRCm39) |
V16G |
unknown |
Het |
4933427I04Rik |
A |
T |
4: 123,754,494 (GRCm39) |
E136V |
probably benign |
Het |
Aadac |
A |
G |
3: 59,943,320 (GRCm39) |
D75G |
probably damaging |
Het |
Arfgap1 |
T |
A |
2: 180,614,518 (GRCm39) |
S125T |
probably benign |
Het |
Atxn2 |
G |
T |
5: 121,949,042 (GRCm39) |
A813S |
probably damaging |
Het |
Cadps |
C |
A |
14: 12,522,352 (GRCm38) |
S604I |
probably damaging |
Het |
Ces1a |
G |
T |
8: 93,771,726 (GRCm39) |
P24T |
probably damaging |
Het |
Col4a4 |
T |
A |
1: 82,433,480 (GRCm39) |
M1488L |
unknown |
Het |
Fndc3c1 |
T |
C |
X: 105,475,029 (GRCm39) |
N941S |
probably damaging |
Het |
Fryl |
T |
C |
5: 73,244,305 (GRCm39) |
Y1172C |
possibly damaging |
Het |
Gm1527 |
T |
C |
3: 28,949,737 (GRCm39) |
|
probably benign |
Het |
Il2 |
T |
C |
3: 37,177,156 (GRCm39) |
T127A |
possibly damaging |
Het |
Inpp5e |
A |
G |
2: 26,287,946 (GRCm39) |
Y617H |
probably damaging |
Het |
Isoc2b |
G |
A |
7: 4,853,763 (GRCm39) |
S137F |
probably damaging |
Het |
Map2 |
C |
T |
1: 66,464,490 (GRCm39) |
P241S |
probably damaging |
Het |
Mfsd6 |
C |
A |
1: 52,748,481 (GRCm39) |
R128L |
probably damaging |
Het |
Mrnip |
A |
G |
11: 50,088,462 (GRCm39) |
T153A |
probably damaging |
Het |
Or4x6 |
A |
G |
2: 89,949,315 (GRCm39) |
F209S |
possibly damaging |
Het |
Or8d1 |
A |
T |
9: 38,767,095 (GRCm39) |
M246L |
probably benign |
Het |
Pi4ka |
T |
C |
16: 17,098,599 (GRCm39) |
N2022S |
probably benign |
Het |
Scrt2 |
C |
A |
2: 151,935,560 (GRCm39) |
R238S |
probably damaging |
Het |
St3gal6 |
T |
A |
16: 58,305,138 (GRCm39) |
D108V |
probably benign |
Het |
Tmem132b |
C |
T |
5: 125,855,855 (GRCm39) |
T529M |
probably damaging |
Het |
Trappc11 |
T |
C |
8: 47,954,904 (GRCm39) |
|
probably null |
Het |
Tspyl1 |
T |
A |
10: 34,159,195 (GRCm39) |
S307T |
possibly damaging |
Het |
Ush2a |
A |
G |
1: 188,131,982 (GRCm39) |
S735G |
probably benign |
Het |
Wnk2 |
T |
C |
13: 49,221,668 (GRCm39) |
M1186V |
possibly damaging |
Het |
|
Other mutations in Hsf2 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00516:Hsf2
|
APN |
10 |
57,388,124 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00965:Hsf2
|
APN |
10 |
57,388,196 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01338:Hsf2
|
APN |
10 |
57,377,475 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01721:Hsf2
|
APN |
10 |
57,372,277 (GRCm39) |
missense |
probably benign |
0.13 |
IGL02219:Hsf2
|
APN |
10 |
57,372,370 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03493:Hsf2
|
APN |
10 |
57,381,462 (GRCm39) |
missense |
probably damaging |
1.00 |
G1Funyon:Hsf2
|
UTSW |
10 |
57,381,442 (GRCm39) |
missense |
probably damaging |
1.00 |
R0270:Hsf2
|
UTSW |
10 |
57,378,735 (GRCm39) |
missense |
probably benign |
0.28 |
R1774:Hsf2
|
UTSW |
10 |
57,388,242 (GRCm39) |
missense |
probably damaging |
1.00 |
R2406:Hsf2
|
UTSW |
10 |
57,373,642 (GRCm39) |
missense |
probably damaging |
0.96 |
R3410:Hsf2
|
UTSW |
10 |
57,381,378 (GRCm39) |
missense |
probably damaging |
1.00 |
R4829:Hsf2
|
UTSW |
10 |
57,372,266 (GRCm39) |
missense |
probably damaging |
0.96 |
R4958:Hsf2
|
UTSW |
10 |
57,377,467 (GRCm39) |
missense |
probably damaging |
0.99 |
R5154:Hsf2
|
UTSW |
10 |
57,380,808 (GRCm39) |
missense |
probably benign |
|
R5237:Hsf2
|
UTSW |
10 |
57,382,317 (GRCm39) |
missense |
probably benign |
0.16 |
R5903:Hsf2
|
UTSW |
10 |
57,380,819 (GRCm39) |
missense |
probably benign |
|
R6125:Hsf2
|
UTSW |
10 |
57,388,101 (GRCm39) |
missense |
probably benign |
|
R6126:Hsf2
|
UTSW |
10 |
57,372,013 (GRCm39) |
missense |
probably damaging |
1.00 |
R6280:Hsf2
|
UTSW |
10 |
57,387,591 (GRCm39) |
missense |
probably benign |
0.03 |
R6309:Hsf2
|
UTSW |
10 |
57,362,676 (GRCm39) |
start gained |
probably benign |
|
R6954:Hsf2
|
UTSW |
10 |
57,380,739 (GRCm39) |
missense |
probably damaging |
1.00 |
R6966:Hsf2
|
UTSW |
10 |
57,372,080 (GRCm39) |
missense |
probably damaging |
1.00 |
R7088:Hsf2
|
UTSW |
10 |
57,388,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R7182:Hsf2
|
UTSW |
10 |
57,381,272 (GRCm39) |
missense |
possibly damaging |
0.87 |
R7511:Hsf2
|
UTSW |
10 |
57,380,653 (GRCm39) |
missense |
probably benign |
0.00 |
R7743:Hsf2
|
UTSW |
10 |
57,387,431 (GRCm39) |
splice site |
probably null |
|
R8176:Hsf2
|
UTSW |
10 |
57,381,290 (GRCm39) |
nonsense |
probably null |
|
R8301:Hsf2
|
UTSW |
10 |
57,381,442 (GRCm39) |
missense |
probably damaging |
1.00 |
R8368:Hsf2
|
UTSW |
10 |
57,388,241 (GRCm39) |
missense |
probably damaging |
1.00 |
R8682:Hsf2
|
UTSW |
10 |
57,381,267 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9506:Hsf2
|
UTSW |
10 |
57,381,241 (GRCm39) |
critical splice acceptor site |
probably null |
|
R9520:Hsf2
|
UTSW |
10 |
57,371,996 (GRCm39) |
missense |
probably damaging |
0.99 |
Z1088:Hsf2
|
UTSW |
10 |
57,372,264 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2013-12-03 |