Incidental Mutation 'IGL01544:Slc26a9'
ID90276
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Slc26a9
Ensembl Gene ENSMUSG00000042268
Gene Namesolute carrier family 26, member 9
Synonymsanion transporter/exchanger-9, E030002L01Rik
Accession Numbers
Is this an essential gene? Possibly essential (E-score: 0.589) question?
Stock #IGL01544
Quality Score
Status
Chromosome1
Chromosomal Location131744022-131771504 bp(+) (GRCm38)
Type of Mutationcritical splice donor site (2 bp from exon)
DNA Base Change (assembly) T to C at 131759495 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000036916 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000049027] [ENSMUST00000186122]
Predicted Effect probably null
Transcript: ENSMUST00000049027
SMART Domains Protein: ENSMUSP00000036916
Gene: ENSMUSG00000042268

DomainStartEndE-ValueType
Pfam:Sulfate_transp 71 469 7.4e-99 PFAM
transmembrane domain 473 495 N/A INTRINSIC
Pfam:STAS 520 733 2.8e-27 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000186122
SMART Domains Protein: ENSMUSP00000141171
Gene: ENSMUSG00000042268

DomainStartEndE-ValueType
Pfam:Sulfate_transp 150 428 9.6e-58 PFAM
low complexity region 453 462 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is one member of a family of sulfate/anion transporter genes. Family members are well conserved in their genomic (number and size of exons) and protein (aa length among species) structures yet have markedly different tissue expression patterns. The product of this gene is a highly selective chloride ion channel regulated by WNK kinases. Alternative splicing results in multiple transcript variants encoding differing isoforms.[provided by RefSeq, Dec 2008]
PHENOTYPE: Mice homozygous for a null allele exhibit reduced gastric secretory membranes and loss of gastric acid secretion. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arap3 G A 18: 37,990,836 R377C probably damaging Het
Bbx C A 16: 50,274,777 E59* probably null Het
Cep120 C T 18: 53,685,961 R886H probably benign Het
Cep350 C A 1: 155,953,187 V324L probably damaging Het
Cry1 T A 10: 85,146,496 K329* probably null Het
Dhtkd1 T C 2: 5,913,531 N627S probably benign Het
Dpp8 A T 9: 65,054,988 T437S probably benign Het
Elovl1 G A 4: 118,430,910 probably null Het
Heca A G 10: 17,915,967 Y114H probably damaging Het
Hrh4 A G 18: 13,015,893 N104S probably benign Het
Ift80 T A 3: 68,990,782 K73N probably benign Het
Ina T C 19: 47,015,509 V252A possibly damaging Het
Klhl36 A G 8: 119,870,016 E152G possibly damaging Het
Lamp5 T A 2: 136,069,070 L241Q probably damaging Het
Lrp4 G A 2: 91,477,551 R447H probably damaging Het
Mmp24 G A 2: 155,799,887 G212R probably damaging Het
Mpp3 A G 11: 102,018,659 V191A possibly damaging Het
Mtmr4 A G 11: 87,597,611 probably benign Het
Mynn C A 3: 30,607,705 S312* probably null Het
Neb T A 2: 52,292,905 I1010F possibly damaging Het
Nes T C 3: 87,977,964 S1177P possibly damaging Het
Noct T C 3: 51,248,048 V79A probably damaging Het
Rad1 A G 15: 10,490,379 D114G probably damaging Het
Sqor G A 2: 122,792,346 probably benign Het
Sspo G T 6: 48,491,019 W4309L probably damaging Het
Thoc7 A C 14: 13,953,435 Y72D probably damaging Het
Thra A G 11: 98,756,928 I43V possibly damaging Het
Timm44 G T 8: 4,275,888 probably benign Het
Trmo C T 4: 46,386,169 G119R probably damaging Het
Trpc4 T C 3: 54,302,146 M644T probably damaging Het
Wdr72 C T 9: 74,148,725 L300F probably damaging Het
Wrn T C 8: 33,324,526 T54A probably benign Het
Other mutations in Slc26a9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00848:Slc26a9 APN 1 131757528 missense probably damaging 0.97
IGL01131:Slc26a9 APN 1 131755542 splice site probably null
IGL01845:Slc26a9 APN 1 131757518 missense probably damaging 0.99
IGL02125:Slc26a9 APN 1 131759437 missense probably damaging 1.00
IGL02151:Slc26a9 APN 1 131764043 missense probably damaging 1.00
IGL02267:Slc26a9 APN 1 131752845 missense probably damaging 1.00
IGL02469:Slc26a9 APN 1 131762936 missense probably damaging 0.96
IGL03137:Slc26a9 APN 1 131763877 missense probably benign 0.01
IGL03324:Slc26a9 APN 1 131764010 missense probably damaging 1.00
R0588:Slc26a9 UTSW 1 131754011 splice site probably benign
R0611:Slc26a9 UTSW 1 131762761 missense probably damaging 1.00
R0639:Slc26a9 UTSW 1 131763804 missense probably damaging 0.97
R0654:Slc26a9 UTSW 1 131765030 missense probably benign 0.00
R0926:Slc26a9 UTSW 1 131753216 missense probably benign 0.40
R1109:Slc26a9 UTSW 1 131758798 missense probably benign 0.05
R1521:Slc26a9 UTSW 1 131750677 missense probably damaging 1.00
R1728:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1728:Slc26a9 UTSW 1 131766012 missense probably benign
R1729:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1729:Slc26a9 UTSW 1 131766012 missense probably benign
R1730:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1739:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1762:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1762:Slc26a9 UTSW 1 131766012 missense probably benign
R1783:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1783:Slc26a9 UTSW 1 131766012 missense probably benign
R1784:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1784:Slc26a9 UTSW 1 131766012 missense probably benign
R1785:Slc26a9 UTSW 1 131763870 missense probably benign 0.05
R1785:Slc26a9 UTSW 1 131766012 missense probably benign
R1992:Slc26a9 UTSW 1 131762794 missense probably damaging 1.00
R2198:Slc26a9 UTSW 1 131763263 splice site probably benign
R3008:Slc26a9 UTSW 1 131765914 missense probably damaging 1.00
R3409:Slc26a9 UTSW 1 131763944 missense probably benign
R3879:Slc26a9 UTSW 1 131769231 missense probably benign 0.39
R4064:Slc26a9 UTSW 1 131763187 missense probably benign 0.01
R4088:Slc26a9 UTSW 1 131767849 missense possibly damaging 0.49
R4657:Slc26a9 UTSW 1 131753138 missense probably damaging 1.00
R5005:Slc26a9 UTSW 1 131765887 missense probably damaging 0.99
R6255:Slc26a9 UTSW 1 131763909 missense probably benign 0.00
R6418:Slc26a9 UTSW 1 131758490 missense probably benign 0.06
R6442:Slc26a9 UTSW 1 131758817 missense possibly damaging 0.58
R6674:Slc26a9 UTSW 1 131765018 missense probably benign 0.01
R6719:Slc26a9 UTSW 1 131761785 missense probably benign 0.13
Posted On2013-12-03