Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01552:Sh2d4b'

90594

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Sh2d4b

Ensembl Gene

ENSMUSG00000037833

Gene Name

SH2 domain containing 4B

Synonyms

A430109M18Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

IGL01552

Quality Score

Status

Chromosome

Chromosomal Location

40535746-40615223 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 40582605 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Arginine at position 195 (Q195R)

Ref Sequence

ENSEMBL: ENSMUSP00000093699 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000096000]

AlphaFold

A6X942

Predicted Effect

probably benign
Transcript: ENSMUST00000096000
AA Change: Q195R

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000093699
Gene: ENSMUSG00000037833
AA Change: Q195R

Domain	Start	End	E-Value	Type
low complexity region	32	43	N/A	INTRINSIC
coiled coil region	149	234	N/A	INTRINSIC
SH2	323	406	4.87e-22	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000225854

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 31 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arl8a	T	C	1: 135,080,606 (GRCm39)		probably null	Het
Bivm	A	G	1: 44,165,933 (GRCm39)	N128D	probably benign	Het
Cfhr4	A	G	1: 139,667,040 (GRCm39)	Y412H	probably damaging	Het
Chil3	C	A	3: 106,056,164 (GRCm39)	G330V	probably damaging	Het
Dscaml1	A	G	9: 45,359,206 (GRCm39)	H155R	probably damaging	Het
Elapor1	A	G	3: 108,388,628 (GRCm39)	W252R	possibly damaging	Het
Etl4	T	A	2: 20,783,000 (GRCm39)	V687D	probably damaging	Het
Fbxw10	A	T	11: 62,748,510 (GRCm39)		probably null	Het
Gfpt2	G	T	11: 49,695,832 (GRCm39)	E21*	probably null	Het
Gm10197	C	T	19: 53,360,122 (GRCm39)	V26I	possibly damaging	Het
Golim4	T	C	3: 75,863,502 (GRCm39)	E35G	probably damaging	Het
Igdcc4	A	G	9: 65,029,784 (GRCm39)		probably benign	Het
Ino80d	A	G	1: 63,097,136 (GRCm39)		probably benign	Het
Ipo13	A	G	4: 117,758,161 (GRCm39)	M734T	probably benign	Het
Klk1b27	C	T	7: 43,704,039 (GRCm39)	L61F	probably damaging	Het
Lamtor5	T	C	3: 107,186,324 (GRCm39)	V31A	probably benign	Het
Lrp1	A	T	10: 127,424,379 (GRCm39)	L769*	probably null	Het
Nipsnap1	A	T	11: 4,839,124 (GRCm39)	S135C	probably damaging	Het
Or4k35	C	A	2: 111,100,257 (GRCm39)	G152C	probably damaging	Het
Pparg	A	T	6: 115,467,083 (GRCm39)	H452L	probably benign	Het
Rab34	C	T	11: 78,082,264 (GRCm39)	A202V	probably damaging	Het
Ryr3	T	A	2: 112,656,228 (GRCm39)	T1923S	possibly damaging	Het
Sall4	A	G	2: 168,598,043 (GRCm39)	S266P	probably damaging	Het
Sik2	C	A	9: 50,828,822 (GRCm39)		probably benign	Het
Slc25a36	A	G	9: 96,961,286 (GRCm39)	V111A	probably benign	Het
Slco1a8	T	C	6: 141,933,432 (GRCm39)	K451R	possibly damaging	Het
Sptbn5	A	T	2: 119,884,903 (GRCm39)		probably benign	Het
Tac2	G	A	10: 127,561,970 (GRCm39)	E25K	possibly damaging	Het
Tnc	A	G	4: 63,888,645 (GRCm39)	V1807A	probably damaging	Het
Top3b	T	C	16: 16,705,687 (GRCm39)		probably benign	Het
Zfp827	A	G	8: 79,802,820 (GRCm39)	E464G	probably damaging	Het

Other mutations in Sh2d4b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00591:Sh2d4b	APN	14	40,594,490 (GRCm39)	missense	probably benign	0.00
IGL02556:Sh2d4b	APN	14	40,542,700 (GRCm39)	missense	probably benign	0.00
R0961:Sh2d4b	UTSW	14	40,596,139 (GRCm39)	missense	probably benign	0.07
R1573:Sh2d4b	UTSW	14	40,564,329 (GRCm39)	critical splice donor site	probably null
R1672:Sh2d4b	UTSW	14	40,614,921 (GRCm39)	start codon destroyed	probably null	1.00
R2360:Sh2d4b	UTSW	14	40,582,548 (GRCm39)	critical splice donor site	probably null
R3951:Sh2d4b	UTSW	14	40,594,503 (GRCm39)	missense	probably damaging	0.98
R4728:Sh2d4b	UTSW	14	40,564,389 (GRCm39)	nonsense	probably null
R4824:Sh2d4b	UTSW	14	40,562,301 (GRCm39)	missense	probably benign	0.01
R6222:Sh2d4b	UTSW	14	40,542,694 (GRCm39)	missense	probably damaging	1.00
R6497:Sh2d4b	UTSW	14	40,596,139 (GRCm39)	missense	probably benign	0.07
R6541:Sh2d4b	UTSW	14	40,542,748 (GRCm39)	missense	probably benign
R7136:Sh2d4b	UTSW	14	40,562,209 (GRCm39)	missense	probably benign	0.08
R7864:Sh2d4b	UTSW	14	40,562,208 (GRCm39)	missense	probably damaging	0.98
R7947:Sh2d4b	UTSW	14	40,542,723 (GRCm39)	missense	probably damaging	1.00
R8843:Sh2d4b	UTSW	14	40,614,832 (GRCm39)	missense	probably benign	0.15
R8886:Sh2d4b	UTSW	14	40,595,946 (GRCm39)	intron	probably benign
R9292:Sh2d4b	UTSW	14	40,537,914 (GRCm39)	missense	probably damaging	0.97

Posted On

2013-12-09