Incidental Mutation 'IGL01584:Or5t17'
| ID |
91462 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or5t17
|
| Ensembl Gene |
ENSMUSG00000049843 |
| Gene Name |
olfactory receptor family 5 subfamily T member 17 |
| Synonyms |
MOR179-4, GA_x6K02T2Q125-48487992-48488966, Olfr1102 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.121)
|
| Stock # |
IGL01584
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
86832276-86833338 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 86832495 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Isoleucine
at position 61
(V61I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149634
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055129]
[ENSMUST00000214002]
|
| AlphaFold |
Q8VES2 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000055129
AA Change: V61I
PolyPhen 2
Score 0.037 (Sensitivity: 0.94; Specificity: 0.82)
|
| SMART Domains |
Protein: ENSMUSP00000052861
Gene: ENSMUSG00000049843
AA Change: V61I
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
8 |
19 |
N/A |
INTRINSIC |
|
Pfam:7tm_4
|
43 |
320 |
8.1e-52 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
47 |
322 |
8.7e-6 |
PFAM |
|
Pfam:7tm_1
|
53 |
302 |
3.6e-19 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214002
AA Change: V61I
PolyPhen 2
Score 0.037 (Sensitivity: 0.94; Specificity: 0.82)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca5 |
A |
G |
11: 110,195,749 (GRCm39) |
V570A |
probably damaging |
Het |
| Abcb1a |
T |
C |
5: 8,748,637 (GRCm39) |
S323P |
possibly damaging |
Het |
| Adcy8 |
C |
T |
15: 64,687,170 (GRCm39) |
D445N |
probably damaging |
Het |
| Cdc14a |
A |
T |
3: 116,186,474 (GRCm39) |
Y102* |
probably null |
Het |
| Cubn |
A |
G |
2: 13,313,472 (GRCm39) |
|
probably benign |
Het |
| Dcaf7 |
T |
C |
11: 105,944,653 (GRCm39) |
S279P |
probably benign |
Het |
| Dock10 |
T |
C |
1: 80,511,567 (GRCm39) |
Q1514R |
probably damaging |
Het |
| Dtx2 |
G |
A |
5: 136,055,420 (GRCm39) |
S369N |
possibly damaging |
Het |
| Dusp11 |
A |
G |
6: 85,930,376 (GRCm39) |
F136S |
probably damaging |
Het |
| Fbxo32 |
T |
C |
15: 58,047,632 (GRCm39) |
D227G |
probably damaging |
Het |
| Flg2 |
T |
A |
3: 93,120,773 (GRCm39) |
V1215E |
unknown |
Het |
| Flg2 |
A |
T |
3: 93,122,777 (GRCm39) |
D1649V |
unknown |
Het |
| Gabbr2 |
T |
C |
4: 46,674,524 (GRCm39) |
K821R |
probably damaging |
Het |
| Gga2 |
T |
C |
7: 121,590,761 (GRCm39) |
T516A |
probably benign |
Het |
| Gm15446 |
T |
A |
5: 110,088,668 (GRCm39) |
*64K |
probably null |
Het |
| Gm5900 |
T |
C |
7: 104,599,361 (GRCm39) |
|
noncoding transcript |
Het |
| Il17rb |
A |
G |
14: 29,725,637 (GRCm39) |
F121S |
probably damaging |
Het |
| Ip6k3 |
C |
A |
17: 27,370,034 (GRCm39) |
R128L |
probably benign |
Het |
| Kmt2d |
A |
T |
15: 98,754,250 (GRCm39) |
|
probably benign |
Het |
| Lrrn4 |
A |
G |
2: 132,719,996 (GRCm39) |
L268P |
probably damaging |
Het |
| Mthfd1l |
C |
A |
10: 3,966,738 (GRCm39) |
S332R |
probably damaging |
Het |
| Or12d12 |
C |
T |
17: 37,610,629 (GRCm39) |
R228H |
probably benign |
Het |
| Pdzd2 |
T |
C |
15: 12,592,569 (GRCm39) |
E25G |
probably damaging |
Het |
| Prima1 |
A |
T |
12: 103,169,047 (GRCm39) |
|
probably null |
Het |
| Rbm26 |
A |
G |
14: 105,368,968 (GRCm39) |
V737A |
probably damaging |
Het |
| Ryr2 |
C |
T |
13: 11,616,644 (GRCm39) |
|
probably null |
Het |
| Sema5b |
G |
T |
16: 35,465,793 (GRCm39) |
C114F |
probably damaging |
Het |
| Spata31f1e |
A |
C |
4: 42,794,014 (GRCm39) |
S39R |
probably damaging |
Het |
| Speg |
T |
C |
1: 75,407,581 (GRCm39) |
V3196A |
probably damaging |
Het |
| Svs3b |
T |
C |
2: 164,097,943 (GRCm39) |
Y126C |
probably benign |
Het |
| Tmem171 |
T |
C |
13: 98,828,683 (GRCm39) |
|
probably null |
Het |
| Tnrc6b |
T |
A |
15: 80,763,883 (GRCm39) |
W462R |
probably benign |
Het |
| Trdmt1 |
T |
C |
2: 13,524,739 (GRCm39) |
R239G |
probably benign |
Het |
| Usp5 |
A |
T |
6: 124,796,350 (GRCm39) |
V583E |
probably damaging |
Het |
| Utrn |
A |
G |
10: 12,602,111 (GRCm39) |
V639A |
probably benign |
Het |
| Vmn1r206 |
T |
C |
13: 22,804,964 (GRCm39) |
K81R |
probably damaging |
Het |
| Vwa3a |
A |
G |
7: 120,383,197 (GRCm39) |
I599M |
probably benign |
Het |
|
| Other mutations in Or5t17 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01371:Or5t17
|
APN |
2 |
86,833,267 (GRCm39) |
missense |
probably benign |
0.31 |
|
IGL01913:Or5t17
|
APN |
2 |
86,833,164 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
IGL02672:Or5t17
|
APN |
2 |
86,832,417 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0003:Or5t17
|
UTSW |
2 |
86,832,710 (GRCm39) |
nonsense |
probably null |
|
|
R0003:Or5t17
|
UTSW |
2 |
86,832,710 (GRCm39) |
nonsense |
probably null |
|
|
R1674:Or5t17
|
UTSW |
2 |
86,832,577 (GRCm39) |
missense |
probably benign |
0.07 |
|
R1688:Or5t17
|
UTSW |
2 |
86,832,730 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3826:Or5t17
|
UTSW |
2 |
86,832,388 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R3925:Or5t17
|
UTSW |
2 |
86,832,718 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4023:Or5t17
|
UTSW |
2 |
86,833,266 (GRCm39) |
nonsense |
probably null |
|
|
R4730:Or5t17
|
UTSW |
2 |
86,832,510 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R5154:Or5t17
|
UTSW |
2 |
86,832,382 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5525:Or5t17
|
UTSW |
2 |
86,832,683 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5685:Or5t17
|
UTSW |
2 |
86,832,621 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5788:Or5t17
|
UTSW |
2 |
86,832,645 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6280:Or5t17
|
UTSW |
2 |
86,832,364 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7178:Or5t17
|
UTSW |
2 |
86,832,879 (GRCm39) |
missense |
probably benign |
0.07 |
|
R9493:Or5t17
|
UTSW |
2 |
86,833,140 (GRCm39) |
missense |
probably benign |
0.45 |
|
R9745:Or5t17
|
UTSW |
2 |
86,832,487 (GRCm39) |
missense |
probably benign |
0.28 |
|
Z1176:Or5t17
|
UTSW |
2 |
86,832,955 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1176:Or5t17
|
UTSW |
2 |
86,832,954 (GRCm39) |
missense |
probably benign |
0.04 |
|
| Posted On |
2013-12-09 |
Incidental Mutation