Incidental Mutation 'IGL01619:Ints6l'
ID 92543
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ints6l
Ensembl Gene ENSMUSG00000035967
Gene Name integrator complex subunit 6 like
Synonyms Ddx26b, 6330505F04Rik, 4930535D10Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.176) question?
Stock # IGL01619
Quality Score
Status
Chromosome X
Chromosomal Location 55500217-55553203 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) G to T at 55542104 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000139507 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000039374] [ENSMUST00000101553] [ENSMUST00000132428] [ENSMUST00000186445]
AlphaFold Q8BND4
Predicted Effect probably benign
Transcript: ENSMUST00000039374
SMART Domains Protein: ENSMUSP00000035379
Gene: ENSMUSG00000035967

DomainStartEndE-ValueType
VWA 1 275 1.29e-1 SMART
Blast:VWA 311 335 1e-6 BLAST
low complexity region 617 633 N/A INTRINSIC
Pfam:INT_SG_DDX_CT_C 776 838 3.8e-34 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000101553
SMART Domains Protein: ENSMUSP00000099089
Gene: ENSMUSG00000035967

DomainStartEndE-ValueType
VWA 1 275 1.29e-1 SMART
Blast:VWA 298 335 7e-7 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000132428
SMART Domains Protein: ENSMUSP00000138630
Gene: ENSMUSG00000035967

DomainStartEndE-ValueType
VWA 1 275 1.29e-1 SMART
Blast:VWA 311 335 1e-6 BLAST
low complexity region 617 633 N/A INTRINSIC
Pfam:INT_SG_DDX_CT_C 775 839 2.1e-34 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134138
Predicted Effect probably benign
Transcript: ENSMUST00000143142
SMART Domains Protein: ENSMUSP00000118865
Gene: ENSMUSG00000035967

DomainStartEndE-ValueType
Blast:VWA 2 223 1e-148 BLAST
low complexity region 394 410 N/A INTRINSIC
Pfam:INT_SG_DDX_CT_C 553 615 1.1e-34 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000186445
SMART Domains Protein: ENSMUSP00000139507
Gene: ENSMUSG00000035967

DomainStartEndE-ValueType
VWA 1 275 1.29e-1 SMART
Blast:VWA 311 335 1e-6 BLAST
low complexity region 617 633 N/A INTRINSIC
Pfam:INT_SG_DDX_CT_C 775 839 2.1e-34 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ankrd46 T C 15: 36,486,113 (GRCm39) T47A possibly damaging Het
Asxl3 T G 18: 22,656,385 (GRCm39) V1465G probably damaging Het
Celsr3 A T 9: 108,711,756 (GRCm39) D1657V probably damaging Het
Celsr3 A G 9: 108,714,603 (GRCm39) H1995R probably benign Het
Cimip2b G A 4: 43,427,814 (GRCm39) T170I possibly damaging Het
Cntn6 G A 6: 104,705,335 (GRCm39) probably benign Het
Def6 C T 17: 28,426,838 (GRCm39) L8F probably damaging Het
Dnah9 T A 11: 65,722,441 (GRCm39) K1940* probably null Het
Dock10 A G 1: 80,612,015 (GRCm39) probably benign Het
Fam72a A G 1: 131,461,650 (GRCm39) I112V probably benign Het
Fgl1 A T 8: 41,650,008 (GRCm39) W258R probably damaging Het
Lifr A T 15: 7,220,643 (GRCm39) N1091I probably damaging Het
Mga T C 2: 119,762,309 (GRCm39) I1100T possibly damaging Het
Mrpl40 T A 16: 18,691,294 (GRCm39) M139L probably benign Het
Myom1 T C 17: 71,351,471 (GRCm39) probably benign Het
Or2m12 T A 16: 19,104,909 (GRCm39) T195S probably damaging Het
Pcdhb5 T C 18: 37,455,992 (GRCm39) F791L probably damaging Het
Prss29 T C 17: 25,540,113 (GRCm39) probably null Het
Ranbp2 A G 10: 58,299,900 (GRCm39) probably null Het
Serpinb9e A G 13: 33,439,108 (GRCm39) K178R probably damaging Het
Shtn1 A G 19: 59,016,601 (GRCm39) S233P probably damaging Het
Smpd1 G A 7: 105,204,549 (GRCm39) V143M possibly damaging Het
Terb1 G A 8: 105,199,646 (GRCm39) H433Y probably benign Het
Traf6 C T 2: 101,520,443 (GRCm39) Q164* probably null Het
Trip12 C A 1: 84,792,631 (GRCm39) R4L probably damaging Het
Ttn G A 2: 76,693,879 (GRCm39) P208S possibly damaging Het
Ube2c T C 2: 164,613,232 (GRCm39) I50T probably damaging Het
Uggt1 T C 1: 36,200,775 (GRCm39) D1174G probably damaging Het
Vmn2r121 T G X: 123,041,997 (GRCm39) M387L probably benign Het
Vmn2r18 T A 5: 151,510,229 (GRCm39) N48I probably benign Het
Zc3h15 T C 2: 83,490,517 (GRCm39) L217P probably damaging Het
Zyg11a T A 4: 108,062,414 (GRCm39) E129V probably damaging Het
Other mutations in Ints6l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02552:Ints6l APN X 55,500,557 (GRCm39) utr 5 prime probably benign
IGL02974:Ints6l APN X 55,552,296 (GRCm39) missense probably benign 0.00
IGL03224:Ints6l APN X 55,543,287 (GRCm39) missense probably damaging 1.00
R0308:Ints6l UTSW X 55,526,715 (GRCm39) missense possibly damaging 0.93
R0733:Ints6l UTSW X 55,550,172 (GRCm39) missense probably benign 0.01
R0733:Ints6l UTSW X 55,547,108 (GRCm39) missense probably benign 0.03
R2121:Ints6l UTSW X 55,550,228 (GRCm39) missense probably benign
R2124:Ints6l UTSW X 55,550,228 (GRCm39) missense probably benign
R2191:Ints6l UTSW X 55,550,110 (GRCm39) missense probably benign 0.03
R2192:Ints6l UTSW X 55,550,110 (GRCm39) missense probably benign 0.03
R2924:Ints6l UTSW X 55,550,196 (GRCm39) missense probably benign 0.01
R3775:Ints6l UTSW X 55,526,731 (GRCm39) missense probably damaging 1.00
Z1176:Ints6l UTSW X 55,543,295 (GRCm39) missense probably damaging 0.97
Posted On 2013-12-09