Incidental Mutation 'IGL01638:Vmn1r6'
ID |
93130 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r6
|
Ensembl Gene |
ENSMUSG00000115701 |
Gene Name |
vomeronasal 1 receptor 6 |
Synonyms |
V1rc20 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.131)
|
Stock # |
IGL01638
|
Quality Score |
|
Status
|
|
Chromosome |
6 |
Chromosomal Location |
56979340-56980251 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
C to T
at 56980177 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Stop codon
at position 280
(Q280*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000153988
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000079669]
[ENSMUST00000226689]
[ENSMUST00000227131]
[ENSMUST00000227188]
[ENSMUST00000227631]
[ENSMUST00000227847]
[ENSMUST00000228285]
|
AlphaFold |
Q8R2D4 |
Predicted Effect |
probably null
Transcript: ENSMUST00000079669
AA Change: Q280*
|
SMART Domains |
Protein: ENSMUSP00000078611 Gene: ENSMUSG00000115701 AA Change: Q280*
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
28 |
293 |
4.9e-54 |
PFAM |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000226689
AA Change: Q280*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227131
AA Change: Q280*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227188
AA Change: Q258*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227631
AA Change: Q258*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227847
AA Change: Q280*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000228285
AA Change: Q280*
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adamts9 |
T |
C |
6: 92,849,409 (GRCm39) |
T436A |
probably benign |
Het |
Adgrb3 |
T |
A |
1: 25,598,832 (GRCm39) |
|
probably benign |
Het |
Ajap1 |
A |
G |
4: 153,516,693 (GRCm39) |
V216A |
possibly damaging |
Het |
Akap7 |
T |
A |
10: 25,143,323 (GRCm39) |
I124F |
probably damaging |
Het |
Arfgef2 |
G |
A |
2: 166,715,865 (GRCm39) |
V1385M |
probably damaging |
Het |
Arhgap30 |
A |
G |
1: 171,225,138 (GRCm39) |
K65E |
probably damaging |
Het |
Bltp1 |
A |
G |
3: 37,028,460 (GRCm39) |
N2377D |
probably damaging |
Het |
Cacna1a |
T |
C |
8: 85,298,456 (GRCm39) |
F1260S |
probably damaging |
Het |
Cad |
T |
A |
5: 31,224,958 (GRCm39) |
C954S |
probably damaging |
Het |
Fcmr |
A |
T |
1: 130,802,859 (GRCm39) |
E157D |
probably benign |
Het |
Gm4204 |
A |
T |
1: 135,160,873 (GRCm39) |
|
noncoding transcript |
Het |
Gzmn |
A |
T |
14: 56,406,476 (GRCm39) |
D16E |
probably benign |
Het |
Krt86 |
A |
C |
15: 101,373,353 (GRCm39) |
|
probably benign |
Het |
Macc1 |
T |
C |
12: 119,410,246 (GRCm39) |
L338P |
probably benign |
Het |
Ms4a6d |
A |
T |
19: 11,564,532 (GRCm39) |
L113Q |
probably damaging |
Het |
Myh15 |
T |
C |
16: 48,889,843 (GRCm39) |
S145P |
probably damaging |
Het |
Nav3 |
T |
C |
10: 109,688,724 (GRCm39) |
K518E |
probably damaging |
Het |
Or8d6 |
T |
C |
9: 39,853,816 (GRCm39) |
S87P |
probably benign |
Het |
Parp11 |
T |
A |
6: 127,468,492 (GRCm39) |
F181I |
probably benign |
Het |
Ppil1 |
C |
A |
17: 29,480,766 (GRCm39) |
K52N |
probably benign |
Het |
Prl5a1 |
T |
A |
13: 28,329,422 (GRCm39) |
C34S |
possibly damaging |
Het |
Prss55 |
A |
G |
14: 64,314,636 (GRCm39) |
V178A |
probably benign |
Het |
S100a7a |
A |
G |
3: 90,562,837 (GRCm39) |
D8G |
probably benign |
Het |
Sh3glb2 |
A |
G |
2: 30,235,862 (GRCm39) |
V310A |
possibly damaging |
Het |
Slc22a7 |
T |
C |
17: 46,748,920 (GRCm39) |
|
probably null |
Het |
Slc27a6 |
A |
G |
18: 58,740,885 (GRCm39) |
D482G |
probably damaging |
Het |
Smarcc2 |
T |
A |
10: 128,323,943 (GRCm39) |
|
probably benign |
Het |
Specc1l |
T |
A |
10: 75,082,039 (GRCm39) |
Y478* |
probably null |
Het |
Spryd3 |
A |
G |
15: 102,038,711 (GRCm39) |
|
probably null |
Het |
Tcerg1l |
G |
A |
7: 137,881,805 (GRCm39) |
R295C |
probably damaging |
Het |
Trpv1 |
T |
C |
11: 73,144,155 (GRCm39) |
I637T |
probably damaging |
Het |
Ttc7 |
A |
C |
17: 87,666,540 (GRCm39) |
|
probably null |
Het |
|
Other mutations in Vmn1r6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00905:Vmn1r6
|
APN |
6 |
56,979,789 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01011:Vmn1r6
|
APN |
6 |
56,979,529 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01147:Vmn1r6
|
APN |
6 |
56,979,626 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01475:Vmn1r6
|
APN |
6 |
56,979,896 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01860:Vmn1r6
|
APN |
6 |
56,979,674 (GRCm39) |
nonsense |
probably null |
|
IGL01876:Vmn1r6
|
APN |
6 |
56,979,446 (GRCm39) |
missense |
probably benign |
0.12 |
IGL01988:Vmn1r6
|
APN |
6 |
56,979,650 (GRCm39) |
missense |
probably damaging |
0.99 |
R0531:Vmn1r6
|
UTSW |
6 |
56,979,583 (GRCm39) |
missense |
probably benign |
0.00 |
R1495:Vmn1r6
|
UTSW |
6 |
56,980,058 (GRCm39) |
missense |
possibly damaging |
0.58 |
R1733:Vmn1r6
|
UTSW |
6 |
56,979,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R2037:Vmn1r6
|
UTSW |
6 |
56,980,109 (GRCm39) |
missense |
probably damaging |
1.00 |
R3625:Vmn1r6
|
UTSW |
6 |
56,979,920 (GRCm39) |
missense |
probably damaging |
0.96 |
R4353:Vmn1r6
|
UTSW |
6 |
56,979,677 (GRCm39) |
missense |
possibly damaging |
0.63 |
R4484:Vmn1r6
|
UTSW |
6 |
56,980,174 (GRCm39) |
missense |
probably benign |
|
R4854:Vmn1r6
|
UTSW |
6 |
56,979,683 (GRCm39) |
missense |
probably benign |
0.00 |
R5237:Vmn1r6
|
UTSW |
6 |
56,980,179 (GRCm39) |
missense |
probably damaging |
1.00 |
R5341:Vmn1r6
|
UTSW |
6 |
56,979,789 (GRCm39) |
missense |
probably damaging |
1.00 |
R5611:Vmn1r6
|
UTSW |
6 |
56,979,362 (GRCm39) |
missense |
probably damaging |
1.00 |
R6795:Vmn1r6
|
UTSW |
6 |
56,979,422 (GRCm39) |
missense |
possibly damaging |
0.85 |
R8423:Vmn1r6
|
UTSW |
6 |
56,979,495 (GRCm39) |
missense |
probably benign |
0.30 |
R9249:Vmn1r6
|
UTSW |
6 |
56,979,760 (GRCm39) |
missense |
probably benign |
|
R9582:Vmn1r6
|
UTSW |
6 |
56,979,925 (GRCm39) |
missense |
probably benign |
|
|
Posted On |
2013-12-09 |