Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01548:Hspa1l'

93193

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Hspa1l

Ensembl Gene

ENSMUSG00000007033

Gene Name

heat shock protein 1-like

Synonyms

70kDa, Hsc70t, Msh5

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.716) question?

Stock #

IGL01548

Quality Score

Status

Chromosome

Chromosomal Location

35191679-35198204 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 35197367 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Threonine at position 469 (A469T)

Ref Sequence

ENSEMBL: ENSMUSP00000007248 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000007248] [ENSMUST00000007266] [ENSMUST00000114011] [ENSMUST00000173004]

AlphaFold

P16627

Predicted Effect

probably damaging
Transcript: ENSMUST00000007248
AA Change: A469T

PolyPhen 2 Score 0.976 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000007248
Gene: ENSMUSG00000007033
AA Change: A469T

Domain	Start	End	E-Value	Type
Pfam:HSP70	8	614	6.5e-269	PFAM
low complexity region	616	629	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000007266

SMART Domains

Protein: ENSMUSP00000007266
Gene: ENSMUSG00000007050

Domain	Start	End	E-Value	Type
Sm	41	108	8.91e-18	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000114011

SMART Domains

Protein: ENSMUSP00000109644
Gene: ENSMUSG00000007050

Domain	Start	End	E-Value	Type
Sm	5	72	8.91e-18	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000151136

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172523

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172777

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172890

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174860

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174241

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174434

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174326

Predicted Effect

probably benign
Transcript: ENSMUST00000173004

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a 70kDa heat shock protein. In conjunction with other heat shock proteins, this protein stabilizes existing proteins against aggregation and mediates the folding of newly translated proteins in the cytosol and in organelles. The gene is located in the major histocompatibility complex class III region, in a cluster with two closely related genes which also encode isoforms of the 70kDa heat shock protein. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acot3	C	T	12: 84,103,863 (GRCm39)	T224I	probably benign	Het
Adamts18	C	T	8: 114,490,931 (GRCm39)	G512E	probably damaging	Het
Atp4b	A	G	8: 13,439,679 (GRCm39)	I181T	probably damaging	Het
Bcl11a	A	G	11: 24,113,346 (GRCm39)	I230V	probably benign	Het
Cenpj	C	A	14: 56,769,776 (GRCm39)	V1138L	probably benign	Het
Cep78	A	G	19: 15,958,564 (GRCm39)		probably benign	Het
Clec2j	T	A	6: 128,632,941 (GRCm39)		noncoding transcript	Het
Col5a3	T	C	9: 20,714,296 (GRCm39)		probably benign	Het
Cpne6	A	T	14: 55,750,183 (GRCm39)	T105S	probably damaging	Het
Csmd1	A	T	8: 16,338,660 (GRCm39)	Y482*	probably null	Het
Ctrl	C	A	8: 106,659,890 (GRCm39)		probably benign	Het
Dhcr24	T	A	4: 106,431,068 (GRCm39)	C252*	probably null	Het
Dnaaf9	T	C	2: 130,656,179 (GRCm39)	N110D	probably damaging	Het
Dnah17	G	A	11: 117,989,438 (GRCm39)	P1261S	probably benign	Het
Dnai2	T	C	11: 114,643,768 (GRCm39)	L466P	probably damaging	Het
Dync2h1	A	T	9: 7,071,922 (GRCm39)	F3036Y	probably damaging	Het
Eef1akmt2	A	C	7: 132,433,134 (GRCm39)	S191A	probably damaging	Het
Fat4	G	A	3: 39,063,406 (GRCm39)	C4454Y	probably damaging	Het
Fat4	T	C	3: 38,941,907 (GRCm39)	S267P	probably damaging	Het
Frrs1	T	C	3: 116,678,834 (GRCm39)	C219R	probably damaging	Het
Gabra6	T	A	11: 42,207,850 (GRCm39)	Q207L	probably damaging	Het
Gm19668	A	T	10: 77,634,242 (GRCm39)	C242*	probably null	Het
Gm2840	G	A	5: 96,322,136 (GRCm39)		noncoding transcript	Het
Gmcl1p1	G	A	X: 3,078,226 (GRCm39)	G423S	probably benign	Het
Golim4	C	T	3: 75,815,432 (GRCm39)		probably null	Het
Gucy1b1	G	T	3: 81,942,169 (GRCm39)	T530K	probably damaging	Het
Hacl1	A	T	14: 31,362,553 (GRCm39)	D31E	possibly damaging	Het
Hectd4	A	G	5: 121,502,723 (GRCm39)	T4276A	possibly damaging	Het
Henmt1	T	C	3: 108,850,095 (GRCm39)	I26T	probably damaging	Het
Htra3	T	A	5: 35,821,420 (GRCm39)		probably null	Het
Lrrc28	C	A	7: 67,278,042 (GRCm39)		probably null	Het
Mfhas1	T	C	8: 36,057,613 (GRCm39)	L696P	probably damaging	Het
Mios	A	G	6: 8,234,252 (GRCm39)	K808E	possibly damaging	Het
Mtnr1b	A	G	9: 15,774,496 (GRCm39)	Y188H	probably damaging	Het
Myom1	A	G	17: 71,408,215 (GRCm39)		probably benign	Het
Naca	A	T	10: 127,876,773 (GRCm39)		probably benign	Het
Nckap1l	T	A	15: 103,371,147 (GRCm39)	V213D	probably benign	Het
Ndufa6	C	T	15: 82,238,282 (GRCm39)	V50M	possibly damaging	Het
Or4c35	T	A	2: 89,808,883 (GRCm39)	F254I	possibly damaging	Het
Or5b111	A	G	19: 13,291,350 (GRCm39)	F100L	possibly damaging	Het
Or5g23	A	G	2: 85,439,105 (GRCm39)	W50R	probably benign	Het
Or8b56	A	G	9: 38,739,646 (GRCm39)	T220A	probably benign	Het
Or8k53	T	A	2: 86,178,077 (GRCm39)	Y11F	possibly damaging	Het
Osbpl1a	T	C	18: 12,896,632 (GRCm39)	Y311C	probably damaging	Het
Parp11	A	C	6: 127,468,562 (GRCm39)	Y204S	probably damaging	Het
Pla2g4a	A	G	1: 149,808,407 (GRCm39)		probably null	Het
Plec	T	C	15: 76,073,458 (GRCm39)	R519G	probably benign	Het
Ppp2r5c	T	A	12: 110,534,261 (GRCm39)	Y375N	probably benign	Het
Prss35	C	A	9: 86,637,327 (GRCm39)	S32R	probably benign	Het
Prss57	C	T	10: 79,621,581 (GRCm39)		probably benign	Het
Ptprc	A	C	1: 138,027,219 (GRCm39)		probably null	Het
Rims1	A	G	1: 22,577,683 (GRCm39)	C188R	probably damaging	Het
Ripk4	G	T	16: 97,552,696 (GRCm39)	Y144*	probably null	Het
Rpgrip1	A	T	14: 52,363,728 (GRCm39)		probably benign	Het
Rps6ka4	A	G	19: 6,809,691 (GRCm39)	V378A	probably benign	Het
Rtf1	A	G	2: 119,542,589 (GRCm39)	K298E	probably benign	Het
Sdk1	T	C	5: 142,071,520 (GRCm39)	F1237L	possibly damaging	Het
Slc40a1	T	C	1: 45,948,652 (GRCm39)	K543E	probably benign	Het
Slco1a8	A	G	6: 141,938,238 (GRCm39)	I227T	possibly damaging	Het
Sorcs3	A	T	19: 48,782,607 (GRCm39)	I1041F	possibly damaging	Het
Spata31e4	A	G	13: 50,854,414 (GRCm39)	T91A	probably benign	Het
Spata31f3	T	C	4: 42,868,564 (GRCm39)	E353G	probably benign	Het
Taok3	T	C	5: 117,410,262 (GRCm39)	M818T	probably benign	Het
Tas2r119	T	A	15: 32,178,123 (GRCm39)	F230I	probably damaging	Het
Tbc1d8	T	C	1: 39,420,385 (GRCm39)	D716G	probably damaging	Het
Tfg	A	G	16: 56,521,465 (GRCm39)	S58P	probably damaging	Het
Thnsl1	A	G	2: 21,217,943 (GRCm39)	I45V	probably damaging	Het
Tle1	A	G	4: 72,088,955 (GRCm39)	L96P	probably damaging	Het
Tmem260	A	C	14: 48,717,782 (GRCm39)	S276R	possibly damaging	Het
Utp20	A	G	10: 88,600,643 (GRCm39)	S24P	probably damaging	Het
Vcam1	T	C	3: 115,909,600 (GRCm39)	I576V	probably benign	Het
Vmn1r27	G	T	6: 58,192,538 (GRCm39)	N105K	probably benign	Het
Vmn2r12	A	C	5: 109,240,893 (GRCm39)	Y73*	probably null	Het
Vmn2r86	T	C	10: 130,282,151 (GRCm39)	I822V	probably benign	Het
Wdr6	C	T	9: 108,452,096 (GRCm39)	V596I	possibly damaging	Het
Zfp946	A	T	17: 22,673,643 (GRCm39)	K132N	possibly damaging	Het

Other mutations in Hspa1l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00569:Hspa1l	APN	17	35,196,441 (GRCm39)	missense	probably damaging	1.00
IGL01860:Hspa1l	APN	17	35,197,787 (GRCm39)	missense	probably benign	0.00
IGL01959:Hspa1l	APN	17	35,196,111 (GRCm39)	missense	probably damaging	1.00
IGL02661:Hspa1l	APN	17	35,196,251 (GRCm39)	missense	probably benign
R0355:Hspa1l	UTSW	17	35,196,386 (GRCm39)	missense	probably benign
R0850:Hspa1l	UTSW	17	35,196,599 (GRCm39)	missense	probably benign	0.01
R1675:Hspa1l	UTSW	17	35,196,419 (GRCm39)	missense	probably damaging	1.00
R2148:Hspa1l	UTSW	17	35,196,366 (GRCm39)	missense	probably damaging	0.98
R2169:Hspa1l	UTSW	17	35,196,299 (GRCm39)	missense	probably benign
R2418:Hspa1l	UTSW	17	35,196,164 (GRCm39)	missense	probably benign	0.05
R4323:Hspa1l	UTSW	17	35,196,832 (GRCm39)	nonsense	probably null
R4924:Hspa1l	UTSW	17	35,196,832 (GRCm39)	nonsense	probably null
R4926:Hspa1l	UTSW	17	35,197,199 (GRCm39)	missense	possibly damaging	0.92
R5186:Hspa1l	UTSW	17	35,197,445 (GRCm39)	missense	probably damaging	0.97
R5653:Hspa1l	UTSW	17	35,196,396 (GRCm39)	missense	probably damaging	1.00
R5790:Hspa1l	UTSW	17	35,196,216 (GRCm39)	missense	probably benign	0.08
R6086:Hspa1l	UTSW	17	35,197,131 (GRCm39)	missense	possibly damaging	0.77
R6237:Hspa1l	UTSW	17	35,196,428 (GRCm39)	nonsense	probably null
R7229:Hspa1l	UTSW	17	35,196,231 (GRCm39)	missense	probably benign	0.05
R8871:Hspa1l	UTSW	17	35,197,799 (GRCm39)	missense	probably benign	0.42
R8952:Hspa1l	UTSW	17	35,196,946 (GRCm39)	missense	probably benign
R8968:Hspa1l	UTSW	17	35,196,230 (GRCm39)	missense	possibly damaging	0.83
R8984:Hspa1l	UTSW	17	35,197,092 (GRCm39)	missense	probably damaging	0.99
R9056:Hspa1l	UTSW	17	35,196,849 (GRCm39)	missense	probably benign	0.16
R9479:Hspa1l	UTSW	17	35,196,735 (GRCm39)	missense	probably benign	0.05
R9520:Hspa1l	UTSW	17	35,196,972 (GRCm39)	missense	probably damaging	1.00
Z1176:Hspa1l	UTSW	17	35,197,468 (GRCm39)	missense	possibly damaging	0.52
Z1177:Hspa1l	UTSW	17	35,196,992 (GRCm39)	missense	probably benign	0.27

Posted On

2013-12-09