Incidental Mutation 'R1120:Samd5'
ID 95516
Institutional Source Beutler Lab
Gene Symbol Samd5
Ensembl Gene ENSMUSG00000060487
Gene Name sterile alpha motif domain containing 5
Synonyms E130306M17Rik
MMRRC Submission 039193-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.098) question?
Stock # R1120 (G1)
Quality Score 225
Status Validated
Chromosome 10
Chromosomal Location 9498680-9550952 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 9504792 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 154 (V154A)
Ref Sequence ENSEMBL: ENSMUSP00000097648 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000100070]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000100070
AA Change: V154A

PolyPhen 2 Score 0.745 (Sensitivity: 0.85; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000097648
Gene: ENSMUSG00000060487
AA Change: V154A

DomainStartEndE-ValueType
SAM 1 65 2.73e-10 SMART
low complexity region 76 92 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000221079
Meta Mutation Damage Score 0.0852 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 96.8%
  • 20x: 94.2%
Validation Efficiency 100% (40/40)
Allele List at MGI
Other mutations in this stock
Total: 40 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcb8 T G 5: 24,613,818 (GRCm39) probably null Het
Akp3 A T 1: 87,053,159 (GRCm39) Q77L probably damaging Het
Blm A G 7: 80,131,214 (GRCm39) L878S probably damaging Het
Cabin1 A G 10: 75,561,550 (GRCm39) Y984H probably damaging Het
Cadps2 T C 6: 23,838,793 (GRCm39) Q86R probably damaging Het
Cd2 C T 3: 101,194,804 (GRCm39) D95N probably damaging Het
Cd36 A G 5: 17,990,826 (GRCm39) I438T possibly damaging Het
Crhbp G T 13: 95,578,593 (GRCm39) T176K probably benign Het
D630045J12Rik G T 6: 38,171,705 (GRCm39) T821K probably damaging Het
Disp1 T C 1: 182,880,139 (GRCm39) D288G probably benign Het
Dsc3 A G 18: 20,120,034 (GRCm39) V208A probably benign Het
Eef1e1 A T 13: 38,842,910 (GRCm39) N20K probably damaging Het
Ercc5 A G 1: 44,201,001 (GRCm39) D187G probably damaging Het
Etl4 T A 2: 20,811,514 (GRCm39) M1199K probably benign Het
Fnbp1 A T 2: 30,926,606 (GRCm39) Y433N probably damaging Het
Fxyd3 A G 7: 30,770,803 (GRCm39) probably benign Het
Hfm1 A T 5: 107,052,084 (GRCm39) probably benign Het
Irak2 T A 6: 113,652,720 (GRCm39) probably benign Het
Jpt2 T C 17: 25,179,585 (GRCm39) M1V probably null Het
Knl1 A G 2: 118,892,856 (GRCm39) R51G probably damaging Het
Krtap8-1 A G 16: 89,284,753 (GRCm39) Y15H probably benign Het
Lrba A T 3: 86,202,499 (GRCm39) D250V probably damaging Het
Mgat4a A G 1: 37,491,662 (GRCm39) S357P probably damaging Het
Nup98 T A 7: 101,809,923 (GRCm39) T536S probably damaging Het
Or4a27 A G 2: 88,559,281 (GRCm39) Y221H probably damaging Het
Or4c109 A G 2: 88,818,423 (GRCm39) M41T possibly damaging Het
Or9k2 A G 10: 129,998,406 (GRCm39) L263P probably damaging Het
Parp14 G A 16: 35,677,130 (GRCm39) A946V probably benign Het
Pnpla8 A G 12: 44,351,730 (GRCm39) T568A possibly damaging Het
Ptprn A G 1: 75,234,825 (GRCm39) I254T probably benign Het
Rab5b A C 10: 128,515,483 (GRCm39) N188K probably benign Het
Smarcb1 A G 10: 75,757,157 (GRCm39) F25L probably benign Het
Smchd1 A T 17: 71,665,141 (GRCm39) Y1847* probably null Het
Smpd4 T C 16: 17,456,350 (GRCm39) probably benign Het
Tex14 T A 11: 87,429,502 (GRCm39) probably benign Het
Tnfrsf26 G A 7: 143,171,651 (GRCm39) R101C probably damaging Het
Trmu A G 15: 85,774,486 (GRCm39) K37E possibly damaging Het
Tsen54 C T 11: 115,705,839 (GRCm39) A52V probably damaging Het
Ubb T C 11: 62,443,009 (GRCm39) I13T possibly damaging Het
Vmn2r101 A T 17: 19,797,723 (GRCm39) probably benign Het
Other mutations in Samd5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01337:Samd5 APN 10 9,504,768 (GRCm39) missense probably benign
R0128:Samd5 UTSW 10 9,550,683 (GRCm39) missense probably damaging 1.00
R0130:Samd5 UTSW 10 9,550,683 (GRCm39) missense probably damaging 1.00
R6074:Samd5 UTSW 10 9,550,334 (GRCm39) missense possibly damaging 0.58
R6670:Samd5 UTSW 10 9,504,808 (GRCm39) splice site probably null
R7595:Samd5 UTSW 10 9,504,738 (GRCm39) missense probably benign
R8057:Samd5 UTSW 10 9,550,641 (GRCm39) missense probably damaging 1.00
R9224:Samd5 UTSW 10 9,550,259 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTCTTCCTGCATGGAGTGTCCATTG -3'
(R):5'- GCCGTTAACATTTGGAGCCTTTGC -3'

Sequencing Primer
(F):5'- ttccgagaaaacgttaagctg -3'
(R):5'- CTTTTCTTACAAGGGACACGCAAG -3'
Posted On 2014-01-05