Incidental Mutation 'R1186:Spred1'
ID 102087
Institutional Source Beutler Lab
Gene Symbol Spred1
Ensembl Gene ENSMUSG00000027351
Gene Name sprouty protein with EVH-1 domain 1, related sequence
Synonyms 5730461F13Rik, Spred-1
MMRRC Submission 039258-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.346) question?
Stock # R1186 (G1)
Quality Score 225
Status Validated
Chromosome 2
Chromosomal Location 117121374-117182279 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to T at 117177697 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Arginine to Serine at position 361 (R361S)
Ref Sequence ENSEMBL: ENSMUSP00000028829 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000028829] [ENSMUST00000110901]
AlphaFold Q924S8
Predicted Effect possibly damaging
Transcript: ENSMUST00000028829
AA Change: R361S

PolyPhen 2 Score 0.929 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000028829
Gene: ENSMUSG00000027351
AA Change: R361S

DomainStartEndE-ValueType
Pfam:WH1 10 120 9.3e-15 PFAM
Pfam:Sprouty 332 437 6e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000110901
SMART Domains Protein: ENSMUSP00000106526
Gene: ENSMUSG00000027351

DomainStartEndE-ValueType
Pfam:WH1 9 120 2.5e-15 PFAM
Meta Mutation Damage Score 0.0821 question?
Coding Region Coverage
  • 1x: 99.5%
  • 3x: 98.5%
  • 10x: 95.7%
  • 20x: 90.1%
Validation Efficiency 97% (69/71)
MGI Phenotype FUNCTION: This gene encodes a membrane-associated protein that is phosphorylated by tyrosine kinases in response to growth factors. The encoded protein acts as a negative regulator of the mitogen-activated protein (MAP) kinase signaling pathway. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2013]
PHENOTYPE: Homozygous null mice display increased airway hyperresponsiveness, eosinophilia, a kinked tail, shortened face, impaired spatial learning and memory, and altered CNS transmission. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 68 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700020N01Rik G A 10: 21,621,652 R64Q probably benign Het
4932438A13Rik T C 3: 36,996,312 probably benign Het
9530068E07Rik G A 11: 52,403,078 V49I probably benign Het
A2m T C 6: 121,661,534 S902P probably benign Het
Aatf A T 11: 84,470,549 probably benign Het
Adamtsl1 A G 4: 86,388,509 T1395A probably benign Het
Alpk2 T C 18: 65,294,341 probably null Het
Ank3 G T 10: 69,867,460 A308S probably damaging Het
Arap1 A G 7: 101,404,269 probably benign Het
C4b T C 17: 34,736,309 D769G possibly damaging Het
Cep350 A G 1: 155,875,376 S2017P probably damaging Het
Cfap54 T A 10: 92,875,994 I2704F unknown Het
Crip2 G A 12: 113,144,959 probably benign Het
Cyp4f14 T C 17: 32,916,786 I34V probably benign Het
Dcstamp A G 15: 39,754,629 probably null Het
Ddx5 T C 11: 106,783,979 probably null Het
Dnah2 A T 11: 69,515,700 L572Q probably damaging Het
Espl1 G A 15: 102,304,039 A527T probably benign Het
Fam83d A G 2: 158,785,174 D261G probably damaging Het
Fbxo34 T C 14: 47,530,586 F468L probably damaging Het
Gabarapl1 A T 6: 129,533,405 probably benign Het
Galnt17 G T 5: 131,111,742 T179K probably damaging Het
Gm6768 A C 12: 119,261,471 noncoding transcript Het
Gm6899 C T 11: 26,593,685 probably benign Het
Helz2 T A 2: 181,231,128 R2433W probably damaging Het
Hivep3 T C 4: 119,814,723 probably benign Het
Hsh2d G A 8: 72,200,460 D229N probably benign Het
Ica1 A G 6: 8,672,326 L225P probably damaging Het
Inpp5f T C 7: 128,694,583 I195T probably benign Het
Isyna1 C A 8: 70,595,201 N115K probably benign Het
Ly6g6e T C 17: 35,078,008 F75S probably benign Het
Ly96 A G 1: 16,700,894 D101G possibly damaging Het
Mapk9 A G 11: 49,878,269 T243A probably damaging Het
Mcc A G 18: 44,759,403 V48A probably benign Het
Mcpt2 C T 14: 56,043,945 probably benign Het
Med24 T C 11: 98,717,757 probably benign Het
Mtbp G A 15: 55,564,671 G162S probably null Het
Mtfr2 G A 10: 20,352,852 C48Y probably benign Het
Naip2 C T 13: 100,161,981 A516T possibly damaging Het
Naip2 AGGG AGG 13: 100,162,037 probably null Het
Nup107 A C 10: 117,777,146 Y292* probably null Het
Nwd2 C T 5: 63,650,024 probably benign Het
Nxpe4 A C 9: 48,393,392 N260H probably benign Het
Ofcc1 C T 13: 40,208,829 G206R probably benign Het
Olfr1084 A T 2: 86,639,463 L82M probably damaging Het
Olfr5 T C 7: 6,480,542 I205V probably benign Het
Olfr901 T C 9: 38,431,101 V273A possibly damaging Het
Olfr911-ps1 T C 9: 38,524,157 S142P probably damaging Het
P2rx7 T C 5: 122,670,451 Y299H probably damaging Het
Per3 T A 4: 151,026,138 E401V probably damaging Het
Rbm34 C A 8: 126,965,447 E182* probably null Het
Sdk2 C T 11: 113,838,646 silent Het
Senp2 T C 16: 22,011,504 S38P probably damaging Het
Slc36a2 A T 11: 55,164,231 probably null Het
Spry2 A G 14: 105,892,907 C282R probably damaging Het
Srp54b T C 12: 55,255,528 probably benign Het
Taar8c G C 10: 24,101,565 Y116* probably null Het
Tchh C G 3: 93,448,046 R1598G unknown Het
Tex15 A G 8: 33,571,633 M364V probably benign Het
Ttbk1 T C 17: 46,467,131 R662G probably damaging Het
Ttc5 G A 14: 50,767,226 Q374* probably null Het
Usp46 C T 5: 74,002,122 A312T probably benign Het
Vmn1r176 A T 7: 23,835,626 L34Q probably damaging Het
Vmn1r178 A T 7: 23,893,892 R122* probably null Het
Vmn2r6 T A 3: 64,565,067 M78L probably benign Het
Zfp407 A T 18: 84,209,448 I2012N probably benign Het
Zfp980 G A 4: 145,702,083 G461S probably benign Het
Zfyve26 G A 12: 79,263,949 L161F probably damaging Het
Other mutations in Spred1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00674:Spred1 APN 2 117177858 missense probably damaging 1.00
IGL01838:Spred1 APN 2 117177581 missense probably benign 0.01
R0482:Spred1 UTSW 2 117152978 splice site probably null
R1293:Spred1 UTSW 2 117177408 missense probably damaging 1.00
R1617:Spred1 UTSW 2 117175347 missense probably benign 0.00
R3499:Spred1 UTSW 2 117175386 missense probably benign
R4711:Spred1 UTSW 2 117175385 missense probably benign 0.00
R5137:Spred1 UTSW 2 117163571 missense probably damaging 1.00
R5162:Spred1 UTSW 2 117177621 missense possibly damaging 0.84
R5517:Spred1 UTSW 2 117177714 missense probably damaging 0.99
R5665:Spred1 UTSW 2 117153005 nonsense probably null
R7577:Spred1 UTSW 2 117177325 missense probably benign 0.09
R7769:Spred1 UTSW 2 117177449 missense probably benign
R9233:Spred1 UTSW 2 117172163 missense unknown
R9292:Spred1 UTSW 2 117175351 missense probably benign 0.11
R9465:Spred1 UTSW 2 117153167 critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- TGGTATTTAAGACACAGCCTCCCTCG -3'
(R):5'- GCAGCCTTATGTTTCCCACCACAG -3'

Sequencing Primer
(F):5'- AGCCTCCCTCGTTAAAATTTAAGTC -3'
(R):5'- TGGCACATTCTCAAAGGGAC -3'
Posted On 2014-01-15